Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00145 ATGGGTCTTTCCATCTGGGCCTTCTCCGCGATTTTAGCAGCAACCCTTTTCAGCCACTGCTCCTTTTCGCTCACTGAAGATGGTTTGACATTGTTGGAAATCAAAACTACTTTGAATGACACTAAGAACGTCCTCGCTAATTGGAGCCCTTCAGATGAATCTCCCTGCAAATGGACTGGCATTTCTTGCCATCCCCAGGACTCTCGTGTTAGCTCAATTAATCTACCGTTCATGCAACTAGCAGGGACTATATCTCCCAGCATTGGTAAACTTAGTAGATTGCAGAGACTGGCTCTCCACCAGAACGGATTACATGGATATATTCCCAATGAACTTGCCAATTGTTCTGAACTTAGAGCCATCTACCTGAGGGCTAACTATCTCCAAGGTGGGATTCCATCAAATATTGGAAACCTTTCTTACCTCACCATACTTGATTTATCAAGCAATTCCCTTAAGGGAAGTATACCATCATCAATTGGTCGTCTCACAAACTTACGCAATCTGAATTTGTCTACCAACTTTTTCTTTGGAGAAATCCCAGATATTGGAGTTCTAAGCACCTTTGGGAATAACTCGTTCTTTGGTAATCAAGATCTTTGTGGTCGGCAAGTGAACAAGCCGTGTCGGACCTCACTGGGGTTTCCTGCTGTTTTACCACATGCTGGAATTCCTGTGAAACGATCCTCTCATTACATCAAAGGACTGTTAATTGGTGCAATATCGACAGCAGGGTTCGTGTTGGTCATACTTCTTGTACTCATGTGGACTCGTTTGGTATCCAAGAAAGAAAGAACTGCAAAGAGTTACTTGGAAGTTAAGAAGCAAAATACTCGCGAATCAAGTGCAAAGCTCATTACATTCCATGGTGATCTACCGTACCCGACGTGTGAGATCATAGAAAAGCTGGAGGCCCTTAAAGAAACAAATATTGTTGGCTCAGGAGGGCTCGGCACCGTGTATCGGATGGTCATGAATGATCGTGAAGCGTTTGCTGTAAAGAAAATTGATAGGAGTCAAGATGGTTCAGATCAAGTAATTGAAAGAGAATTGGAGATCTTGGGAAGCATTAAACACATAAATTTAGTGACACTGCGTGGTTATTGCAGGCTCCCTTCTTCAAAGCTTCTTATATATGACTATCTCGCAGCTGGTAGCTTGGATGATTTCTTACATGAATATGGACCCGAAAGGTCTTTGGATTGGAGTGCTCGGTTAAACATAGCGCTCGGCTCCGCTCGAGGACTGGCATACTTGCACCATGATTGCTGTCCAAAGATTGTGCACTGCAACATAAAATCCAGCAACATTCTTCTCGACAAGAACTTAGAGGCGCATGTATCCGACTTTGGTCTCGCAAAGCTTTCGGTTGATGGGGATTCCCATGTCACAACTGTTGTTGCTGGCACATTTGGTTATTTGTCTCCAGAATACTTGCAAAGTGGCATAGGAACTGAGAAGTCTGATGTTTATAGCTTTGGAGTTCTGTTGCTGGAGCTTGTAACAGGGAAGAGACCCAGTGATCCATTTTTCTCAAAAAGGGGCTTAAATGTTGTTGGTTGGTTGAACACACTCCGGGGAGAAGACCAATTGGAGAACATAGTGGATAATAGGTGCAAGAATGCAGATGTCGAAACTGTAGAAGTGATTCTTGAAATAGCAGCAAGGTGCACCAATGGCAACCCGGCTATGCGGCCTACAATGAACCAAGTTCTGCAGCTGCTAGAGCGAGAGTTTGTGCAACATGTTAAGAAACAGCTGCTGCCTGCATATTGTATTCACTTTGTGTTAAGAATCTCAACACAAGAACATGTAAGTTTCAGTAGTACATTCATGACACTTCCCTCTGATTTTGGGTTCTCTGCACAAAATCTTGCTTCTCCTTACGTTTTTACAAAACTCGGGTACCAGAACTTGAGGTTGGGGTCCATTTCCCTCTGGGTCTGCGGATTATTGGCCACTGAGTATGGAGTTGCGTGGGAGACATTAAATTCCACGTTCGTGAGGGCCAACAATGTCCATTGTTTGTGTGTGTCCTGTCCTCAGAAAGATGACCTACGCCCCCCGGCAACCATCAAAGGCAAGGATCCTTACACTCTCATTTCCACCCCCATCTGA 2118 44.19 MGLSIWAFSAILAATLFSHCSFSLTEDGLTLLEIKTTLNDTKNVLANWSPSDESPCKWTGISCHPQDSRVSSINLPFMQLAGTISPSIGKLSRLQRLALHQNGLHGYIPNELANCSELRAIYLRANYLQGGIPSNIGNLSYLTILDLSSNSLKGSIPSSIGRLTNLRNLNLSTNFFFGEIPDIGVLSTFGNNSFFGNQDLCGRQVNKPCRTSLGFPAVLPHAGIPVKRSSHYIKGLLIGAISTAGFVLVILLVLMWTRLVSKKERTAKSYLEVKKQNTRESSAKLITFHGDLPYPTCEIIEKLEALKETNIVGSGGLGTVYRMVMNDREAFAVKKIDRSQDGSDQVIERELEILGSIKHINLVTLRGYCRLPSSKLLIYDYLAAGSLDDFLHEYGPERSLDWSARLNIALGSARGLAYLHHDCCPKIVHCNIKSSNILLDKNLEAHVSDFGLAKLSVDGDSHVTTVVAGTFGYLSPEYLQSGIGTEKSDVYSFGVLLLELVTGKRPSDPFFSKRGLNVVGWLNTLRGEDQLENIVDNRCKNADVETVEVILEIAARCTNGNPAMRPTMNQVLQLLEREFVQHVKKQLLPAYCIHFVLRISTQEHVSFSSTFMTLPSDFGFSAQNLASPYVFTKLGYQNLRLGSISLWVCGLLATEYGVAWETLNSTFVRANNVHCLCVSCPQKDDLRPPATIKGKDPYTLISTPI 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 731029 735704 + CmoCh11G001450.1 Cmo11g00145 390764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00145 705 Pfam Leucine rich repeat 118 174 IPR001611 GO:0005515
Cmo11g00145 705 Pfam Protein kinase domain 308 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00145 705 Gene3D Transferase(Phosphotransferase) domain 1 382 588 - -
Cmo11g00145 705 SUPERFAMILY L domain-like 25 184 - -
Cmo11g00145 705 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Cmo11g00145 705 Gene3D Phosphorylase Kinase; domain 1 266 381 - -
Cmo11g00145 705 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 35 585 - -
Cmo11g00145 705 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 585 - -
Cmo11g00145 705 SUPERFAMILY Protein kinase-like (PK-like) 285 576 IPR011009 -
Cmo11g00145 705 ProSiteProfiles Protein kinase domain profile. 306 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00145 705 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g00145 Cmo18g00100 CCT
Cmo10g00196 Cmo11g00145 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00145 Cmo-Chr11:731029 Cmo07g00173 Cmo-Chr7:916091 2.59E-07 dispersed
Cmo10g00196 Cmo-Chr10:878673 Cmo11g00145 Cmo-Chr11:731029 0 wgd
Cmo11g00145 Cmo-Chr11:731029 Cmo18g00100 Cmo-Chr18:681892 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74642 PF00069 Pkinase 2.30E-43 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00145 - - csv:101217728 1039.64