Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00166 ATGGACCCTTTTCCTTTGTCATGCCATCTTTCCCCTCTCCATTTCAGGAACTGCAATTTTGGGTTTCAAGACAGCATTTTTGACGTTGTTCCATTGTTTGAGACATGCCCAAATGACTCCTTTTTGGTTCTAAAGGATATTGAACCCAATAACACCATTATATCAGAAGATGGTGGAGAAAATGAAAAGAAGGGATTAGAGAGGAAAGAAGGGAGGGGCAAAAGGAAGTGGCGCGGAGAAAGGAGCAGCAGCCCATCAAAAGGTTTGTCAAGAAAGACAATATCTGAGTACTTCTGGATGCCCATAAGTCAGGCCGCTAAGGAATTGAATGTGGGGCTCACTCTGTTGAAGAAGAGGTGTAGAGAATTGGGCATAAGGAGATGGCCTCATAGGAAGCTGATGAGCCTCCAAACGCTAATCAGGAATGTGAAGGAGCTTGAGAAGGAAGATGGAGTGAAGCTAAGGCATGTATTGGAGATATTAGAGAATGAGAAGAAGTTAATGGAAGAGAGGCCAGATTTACAGTTGGAGGACAACACGAAGAGGCTTAGACAAGCCTGCTTCAAGGCCAACTACAAGAAAAAAAGGCTGTCCGGAACAAACAACTCCTCAGCCACCAGGGTTCATCAGGATGATGATGAAGAAGAAGAAGATGAAGAAATGAAGTATCTGTTGGCGGATTGCTCATTTTCATTCACTGGTGGCAGCCTGTTGCTGTACTAA 723 44.12 MDPFPLSCHLSPLHFRNCNFGFQDSIFDVVPLFETCPNDSFLVLKDIEPNNTIISEDGGENEKKGLERKEGRGKRKWRGERSSSPSKGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIRNVKELEKEDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKRLSGTNNSSATRVHQDDDEEEEDEEMKYLLADCSFSFTGGSLLLY 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 818859 819737 + CmoCh11G001660.1 Cmo11g00166 390785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00166 240 MobiDBLite consensus disorder prediction 57 82 - -
Cmo11g00166 240 MobiDBLite consensus disorder prediction 53 89 - -
Cmo11g00166 240 Pfam RWP-RK domain 89 136 IPR003035 -
Cmo11g00166 240 PANTHER PROTEIN RKD1-RELATED 20 211 - -
Cmo11g00166 240 ProSiteProfiles RWP-RK domain profile. 69 156 IPR003035 -
Cmo11g00166 240 MobiDBLite consensus disorder prediction 197 216 - -
Cmo11g00166 240 PANTHER PROTEIN RKD4 20 211 IPR044607 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00208 Cmo11g00166 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00166 Cmo-Chr11:818859 Cmo18g01356 Cmo-Chr18:12775025 8.50E-33 dispersed
Cmo11g00166 Cmo-Chr11:818859 Cmo10g00207 Cmo-Chr10:926403 6.76E-81 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10522 PF02042 RWP-RK 2.40E-20 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00166 - - cmax:111471365 417.157