Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00186 ATGGGGGCAGAATTCTGTACCACTCCATTCCCCTCCTCCCTTTTCCTCCTCTCTCTATTCCTCTTCTTCTCTCTCTCCTCTGCTATTCATCCCTCTTTTGTTCCCTTTTCCCCTCGCGACAATTACTTGATCGACTGCGGCTCGCCGGAGCAAACCCATCTCGACGACGGCCGGATTTTCAAATCCGATCGCGAATCGACTTCTCTCCTTGCCACTGAAGAAGACGTCCAAACCTCAATCGATTCCATTCCCGTAAACGCCACTGTTTCGCCTCTGTCTTCTTGGGCATTGCCTCTCTTCCGCACCGCCAGAATCTTCCCCAGCGATTCCACTTACACTTTCTTCATTTCTCAGGCCGGCCGCCATTGGATTCGCCTCTATTTTTACCCTCTTCCTCACCCTAATTATAATCTCTCCGATTCCGTTTTCACTGTCACAACAGACAGTTTCGTCCTCCTCCACGATTTCTCAATCAAGGCCGACTCCAAAATCGTCTCCAAGGAGTATCTAATCAACATCACCACTGATCGATTCTCCCTTCAATTCAAACCAAAGAAGAATTCATCGGCGTTCATCAATGCCATCGAAATCGTCTCCGCCCCAGATCCTCTGTTTTCCGATTCCGCCACCTCTGTTTCTCCGGTAGGGTTTTTTAGCGGATTGTCTCATTTCGCTCTGGAAATCTGCTACCGTGTTAATGTCGGAGGGCCTCAGATTGTTCCTAGAAACGATACGTTGTCAAGAACGTGGGAAACAGATGATGCTTTTAACAGATTCCCACAAGGTTCTAAGAACGTTTCTGTGGGTTTGAACTCGATTAAATACCCTGGAAACGACTTGACTCCATTGATTGCTCCATATTGGGTTTATGCAACGGCGGAGGATCTGCAAGATTCAAAAACAATGCAAGTAAGCTTTAATATGAGCTGGAGTTTTAATGTGGAGCAGAGCTATTCGTATTTGATCAGACTCCATTTCTGTGACATTGTGAGCTCCGTCCTCAACACTTTGTACTTCAATGTTTACATCAATGGGATGATGGGTATTGCAGATCTTGACCTCTCTCAGCTCACCGGCGATCTTTCAACTCCTTACTACAGAGACCTCGTCCTCAATGCCTCCTCCGTCAAGAACAACACCATCATGATTCAGGTCGGTCCATCCAATCTGAATTCAGGCCTTCAAGATGCAATCCTTAATGGTGTAGAGATCATGAAGATGAGCAACGATGCACAGAGCTTGGATGGGTTGTTTTCAGTGGATGGAAAATACATGGGAGGCTCAAGATTTAGCACCATGAAGATTGCAGCTATTGTGGCTTTGGGAATGGGAGTGATGGCGGTTCTGTTTCTTGGAGTAATGTTCTTGAGATGGCAGAAAAGGCCTCAAGGATGGGAGAAGAGGAAGAGCTTCTCTTCATGGCTTCTCCCATTGCATTCAAATCAATCCAGTTTCTTCTCTAGCAAAAGCAGCTCCAGAAGATCAAGCGTTTTTGGGTCTCGCCGGAGCAAGACTGGGTTCTCAGGTATCTACACCAATGTCGGCCTCGGCCGTTTCTTCTCCCTCAATGAGTTACAGGTTGCGACCCATAATTTCGACGAGAAAGCAGTGATCGGCGTTGGTGGGTTCGGCAAAGTCTACGTCGGAGCATTAGAAGACGGAACCAAACTCGCTATCAAACGAGGAAACCCTAGCTCTGATCAAGGCATTAACGAGTTCAGAACTGAAATCGAAATGCTCTCCAAACTCCGCCATCGCCATCTCGTTTCCCTAATCGGTTACTGCGACGAGCAATCCGAGATGATTCTTGTGTACGAATACATGGCCAATGGCCCATTTCGCGACCATTTATACGGCTCAAATCTCCCTCCATTGTCGTGGAAACAGAGGCTCGAAATCTGCATAGGCGCCGCCCGTGGGCTGCACTATCTCCACACCGGTGCAGCTCAGGGCATCATCCACCGTGATGTGAAGACCACAAACATTCTCCTCGACGAGAATTTTGTTGCTAAAGTCTCTGATTTTGGACTCTCGAAAGCCGCCCCATCACTGGAACAGACCCATGTCAGCACTGCAGTGAAAGGAAGCTTCGGTTACCTCGATCCAGAGTACTTCAGACGACAACAATTGACTGACAAATCTGATGTTTACTCATTTGGGGTTGTTCTATTTGAAGTCCTATGCGCGAGACAAGTGATAAACCCGACATTGCCGCGAGAGCAGGTGAATTTGGCGGAGTGGGCAATGCAGAATTACAGAAAAGGAAAGCTAGAGAAGATAATCGATCCTGTTATTAGCAGCTCAATAGTACAGGGGTCGCTGAAGAAATTCGTGGAAGCAGCAGAGAAATGCTTGGGTGAGTATGGCGTGGACAGGCCGAGCATGGGAGATGTGCTGTGGAACTTAGAATATGCTTTGCAGCTGCAAGAGGCAGTGTCAGAGCTGGAGGACCCAGAGGAAGACAAGTGCGAAGGGCTGGCGGCTTTGGACAAAGGAAACGACGATGAACCCAAAGGAAAAGGCAGTGCTTCTGCGAGTAATGATGCTTCTGAAGTGTCAGTGAGTGCTCCTCTGTTTGCAGAGATATGGAGGAATCAACAGCTTCTTCATTATGACCAAACAACCCTTTGGATTCATAGCCCCAAACCCATCGTTTTGATTCAAGTTCTTCCAATGGAGGATTCAAGAAAGCTCCTCAGAAGATCGGTTTACAGTTTTCTTCAGAATTATCAGTTCTTCACCTCAATTGCGGCTGTTCTTGCGTTTCCGTATGCAATCTCTGTTCTTCTTTCACAAACTGTTCTTCCTTCGTCTTCTCTTTTTTCCTCTGCTTTTGATCATTTCAGGGCTCTGTTTGATGCTGCTGGGTTCCCCATATCTTCAAAATTCTTCTCAATTCTCATTCAGAAGCTCTCTCAAACGGTTGTTTCATCCATTTATTCTCTACCCTTTTCTCTGACTTTCCTTTTGATTTCAAAAGCCTGTGTAATTCAAGCTTTGAATCAGCAGAAACCCAGTTTGGAGCCGTCTTTTTCTTCGATTATGTCGCTTTTCAATCCCCTCCTTGTGACCCATGTCTGCAATTCGTTCGTCTTCGTCTCTGTCAATGCAACAGTGTTTTTCCTGCTGTTTTTCGCCTTCAATTGCCTCCAGGGATTTGGGTTCTTCTTCTCCCCCAATTGGATCATGTGGGTATCAGTTTTTGGGGCTTTTTTGTATTCAATAGCGATTGCTAAAGCCATCATAATCTGTAATTTGGCATCGGTGTTGTCGGGGATGGAGAGGAAAGGAGGATTCATGGCGATTCTTAAGGCTTGGGTTTTGATTCAGGGGAGAAGCGCGACGGCGCTGTTGGTGGCGCTGCCTTTCAATATGGGTATGGCAGGCATTGAAGCTCTGTTCCAGTACAGAATAGTGGGAGGTTACCATTCAAGGGAGAGATTGGGAGGTTGGGTGGTGGTGGAAGGAATGTTTGTGGCGTATTTGTACTCTGTTTTTGTGGTACTTGACGCCATTGTTAACACCATGTTCTTCAAAAGTTACAGAATGGGTTATGGAATGTGTCTGGAAAGGAAGAGGTGTGTTTGTTGTTGGATGGATGTTGGTGAGAAGGAGGGTGAAGGTGGGTGGCCTCCATTGGAAGGGCTTTGA 3651 46.81 MGAEFCTTPFPSSLFLLSLFLFFSLSSAIHPSFVPFSPRDNYLIDCGSPEQTHLDDGRIFKSDRESTSLLATEEDVQTSIDSIPVNATVSPLSSWALPLFRTARIFPSDSTYTFFISQAGRHWIRLYFYPLPHPNYNLSDSVFTVTTDSFVLLHDFSIKADSKIVSKEYLINITTDRFSLQFKPKKNSSAFINAIEIVSAPDPLFSDSATSVSPVGFFSGLSHFALEICYRVNVGGPQIVPRNDTLSRTWETDDAFNRFPQGSKNVSVGLNSIKYPGNDLTPLIAPYWVYATAEDLQDSKTMQVSFNMSWSFNVEQSYSYLIRLHFCDIVSSVLNTLYFNVYINGMMGIADLDLSQLTGDLSTPYYRDLVLNASSVKNNTIMIQVGPSNLNSGLQDAILNGVEIMKMSNDAQSLDGLFSVDGKYMGGSRFSTMKIAAIVALGMGVMAVLFLGVMFLRWQKRPQGWEKRKSFSSWLLPLHSNQSSFFSSKSSSRRSSVFGSRRSKTGFSGIYTNVGLGRFFSLNELQVATHNFDEKAVIGVGGFGKVYVGALEDGTKLAIKRGNPSSDQGINEFRTEIEMLSKLRHRHLVSLIGYCDEQSEMILVYEYMANGPFRDHLYGSNLPPLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVSDFGLSKAAPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARQVINPTLPREQVNLAEWAMQNYRKGKLEKIIDPVISSSIVQGSLKKFVEAAEKCLGEYGVDRPSMGDVLWNLEYALQLQEAVSELEDPEEDKCEGLAALDKGNDDEPKGKGSASASNDASEVSVSAPLFAEIWRNQQLLHYDQTTLWIHSPKPIVLIQVLPMEDSRKLLRRSVYSFLQNYQFFTSIAAVLAFPYAISVLLSQTVLPSSSLFSSAFDHFRALFDAAGFPISSKFFSILIQKLSQTVVSSIYSLPFSLTFLLISKACVIQALNQQKPSLEPSFSSIMSLFNPLLVTHVCNSFVFVSVNATVFFLLFFAFNCLQGFGFFFSPNWIMWVSVFGAFLYSIAIAKAIIICNLASVLSGMERKGGFMAILKAWVLIQGRSATALLVALPFNMGMAGIEALFQYRIVGGYHSRERLGGWVVVEGMFVAYLYSVFVVLDAIVNTMFFKSYRMGYGMCLERKRCVCCWMDVGEKEGEGGWPPLEGL 1216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 903039 911864 + CmoCh11G001860.1 Cmo11g00186 390805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00186 1216 Gene3D Phosphorylase Kinase; domain 1 502 607 - -
Cmo11g00186 1216 PANTHER OS07G0166700 PROTEIN 31 840 IPR045272 GO:0004714|GO:0006468
Cmo11g00186 1216 Pfam Protein tyrosine and serine/threonine kinase 536 741 IPR001245 GO:0004672|GO:0006468
Cmo11g00186 1216 ProSiteProfiles Protein kinase domain profile. 532 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00186 1216 MobiDBLite consensus disorder prediction 828 848 - -
Cmo11g00186 1216 Pfam Malectin-like domain 44 407 IPR024788 -
Cmo11g00186 1216 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Cmo11g00186 1216 SMART serkin_6 532 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00186 1216 CDD STKc_IRAK 538 803 - -
Cmo11g00186 1216 Gene3D Transferase(Phosphotransferase) domain 1 608 825 - -
Cmo11g00186 1216 PANTHER OS03G0759600 PROTEIN 31 840 - -
Cmo11g00186 1216 SUPERFAMILY Protein kinase-like (PK-like) 506 803 IPR011009 -
Cmo11g00186 1216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Cmo11g00186 1216 Gene3D - 41 201 - -
Cmo11g00186 1216 Gene3D - 224 410 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00610 Cmo-Chr8:3704128 Cmo11g00186 Cmo-Chr11:903039 0 dispersed
Cmo11g00186 Cmo-Chr11:903039 Cmo17g00792 Cmo-Chr17:7601963 0 dispersed
Cmo01g00844 Cmo-Chr1:4493135 Cmo11g00186 Cmo-Chr11:903039 6.40E-43 wgd
Cmo10g00226 Cmo-Chr10:983518 Cmo11g00186 Cmo-Chr11:903039 2.10E-151 wgd
Cmo11g00186 Cmo-Chr11:903039 Cmo13g01143 Cmo-Chr13:9260063 2.19E-84 wgd
Cmo11g00186 Cmo-Chr11:903039 Cmo04g01764 Cmo-Chr4:8901963 1.26E-17 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74643 PF12819 Malectin_like 5.90E-37 CL0202 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00186 - - cpep:111793369 1670.6