Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00187 ATGGACGAATCAGTATTAGACGTTGATCAGGTGGAAAATCTCATAAAGTTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATAAGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGGGTAGAGTCGAAGATGAAAGTGTTTTCCTTTAAGATTCAGTTCGGCTCTCAGTTATCAGAATTTAAGAAGAGTTTGAATACTGTCAACTCGGCTTGTCATGAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACGGCGAGGGGTTCTGCAGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACGCTCATGCATTATCTTTGCAAGGTCCTTGCTTCGAAGACACCAGCTCTTCTTAAATTTCATTTGGACCTGGGTAGCCTAGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCGGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAAGCAGGAATTTGTTGCTTCTGAAAATGATGGCCCAGTCTCCGAAATTTTTCGAAAGACGTTGAAAGAATTCATTGCTACTGCTGAGACAGAGGCGGCGTCGGTGACAAATCTGTACTCTGTTGTGGGTAGAAATGCAGACGCACTTGCATTATATTTTGGTGAGGACCCGGCTCGTTGTCCATTTGAGCAGGTTATAGTGACATTATTGAACTTTATGAGATTATTTCGGAAAGCCCACGAAGAGAACTGCAAACAGGCTGAATTGGAAAAGAAAAAATCCGATAAGGATGCTGAAATGGAGAATGCCAAAGGAATTAAATAG 891 41.08 MDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDNLGKCEQYFLELMKVPRVESKMKVFSFKIQFGSQLSEFKKSLNTVNSACHEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLKFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVKQEFVASENDGPVSEIFRKTLKEFIATAETEAASVTNLYSVVGRNADALALYFGEDPARCPFEQVIVTLLNFMRLFRKAHEENCKQAELEKKKSDKDAEMENAKGIK 296
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 912910 920010 - CmoCh11G001870.1 Cmo11g00187 390806
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00187 296 Coils Coil 266 286 - -
Cmo11g00187 296 MobiDBLite consensus disorder prediction 276 296 - -
Cmo11g00187 296 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 291 IPR015425 -
Cmo11g00187 296 Coils Coil 172 192 - -
Cmo11g00187 296 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 292 - -
Cmo11g00187 296 Pfam Formin Homology 2 Domain 1 265 IPR015425 -
Cmo11g00187 296 Gene3D Formin, FH2 domain 1 296 IPR042201 -
Cmo11g00187 296 PANTHER FORMIN-J 1 293 - -
Cmo11g00187 296 SMART it6_source 1 296 IPR015425 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cmo10g00227 Cmo11g00187 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00187 Cmo-Chr11:912910 Cmo11g00464 Cmo-Chr11:2265801 1.16E-137 dispersed
Cmo01g00847 Cmo-Chr1:4495760 Cmo11g00187 Cmo-Chr11:912910 2.11E-152 wgd
Cmo10g00227 Cmo-Chr10:985213 Cmo11g00187 Cmo-Chr11:912910 0 wgd
Cmo11g00187 Cmo-Chr11:912910 Cmo13g01141 Cmo-Chr13:9242670 2.95E-129 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00187 - - cpep:111792358 573.548