Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo11g00187 | ATGGACGAATCAGTATTAGACGTTGATCAGGTGGAAAATCTCATAAAGTTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATAAGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGGGTAGAGTCGAAGATGAAAGTGTTTTCCTTTAAGATTCAGTTCGGCTCTCAGTTATCAGAATTTAAGAAGAGTTTGAATACTGTCAACTCGGCTTGTCATGAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACGGCGAGGGGTTCTGCAGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACGCTCATGCATTATCTTTGCAAGGTCCTTGCTTCGAAGACACCAGCTCTTCTTAAATTTCATTTGGACCTGGGTAGCCTAGAGGCAGCAACCAAGATACAATTGAAGTCTTTAGCGGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAAGCAGGAATTTGTTGCTTCTGAAAATGATGGCCCAGTCTCCGAAATTTTTCGAAAGACGTTGAAAGAATTCATTGCTACTGCTGAGACAGAGGCGGCGTCGGTGACAAATCTGTACTCTGTTGTGGGTAGAAATGCAGACGCACTTGCATTATATTTTGGTGAGGACCCGGCTCGTTGTCCATTTGAGCAGGTTATAGTGACATTATTGAACTTTATGAGATTATTTCGGAAAGCCCACGAAGAGAACTGCAAACAGGCTGAATTGGAAAAGAAAAAATCCGATAAGGATGCTGAAATGGAGAATGCCAAAGGAATTAAATAG | 891 | 41.08 | MDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDNLGKCEQYFLELMKVPRVESKMKVFSFKIQFGSQLSEFKKSLNTVNSACHEVRNSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLKFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVKQEFVASENDGPVSEIFRKTLKEFIATAETEAASVTNLYSVVGRNADALALYFGEDPARCPFEQVIVTLLNFMRLFRKAHEENCKQAELEKKKSDKDAEMENAKGIK | 296 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 912910 | 920010 | - | CmoCh11G001870.1 | Cmo11g00187 | 390806 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo11g00187 | 296 | Coils | Coil | 266 | 286 | - | - | |
| Cmo11g00187 | 296 | MobiDBLite | consensus disorder prediction | 276 | 296 | - | - | |
| Cmo11g00187 | 296 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1 | 291 | IPR015425 | - | |
| Cmo11g00187 | 296 | Coils | Coil | 172 | 192 | - | - | |
| Cmo11g00187 | 296 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1 | 292 | - | - | |
| Cmo11g00187 | 296 | Pfam | Formin Homology 2 Domain | 1 | 265 | IPR015425 | - | |
| Cmo11g00187 | 296 | Gene3D | Formin, FH2 domain | 1 | 296 | IPR042201 | - | |
| Cmo11g00187 | 296 | PANTHER | FORMIN-J | 1 | 293 | - | - | |
| Cmo11g00187 | 296 | SMART | it6_source | 1 | 296 | IPR015425 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo10g00227 | Cmo11g00187 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo11g00187 | Cmo-Chr11:912910 | Cmo11g00464 | Cmo-Chr11:2265801 | 1.16E-137 | dispersed | |
| Cmo01g00847 | Cmo-Chr1:4495760 | Cmo11g00187 | Cmo-Chr11:912910 | 2.11E-152 | wgd | |
| Cmo10g00227 | Cmo-Chr10:985213 | Cmo11g00187 | Cmo-Chr11:912910 | 0 | wgd | |
| Cmo11g00187 | Cmo-Chr11:912910 | Cmo13g01141 | Cmo-Chr13:9242670 | 2.95E-129 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo11g00187 | - | - | cpep:111792358 | 573.548 |