Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00189 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATATCCGAGAGAGTCTATGTGTTCGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCTGATGCGTCTTTCATGGTTTTCAACTTCACAGAAGGTGGTAAGCGAAGTCAAGTTTCTGATGTACTGAGTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATACGAGGGATGTCCTTTATTGCCATTGGAGATGGTTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCGCTGCAGGGTCAACAGAATGTGTTATTGATGCATTGTGAAAGGGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGAAAACAGTACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTCTTATCTCCTTTAAACCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAACTTAGGTTCTGATTGGCCTCCGGCAGATACACCCCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGACGGGGGAAAAGGGTGTAGGCCTGTTGTGCGTGTCTATGGTCAAGACCCCTCAATACCGGCCAATAGAACTTCAAAGCTTTTATTTTCAACATCTATCAACAGAAAACATATCCGAAACTACCAACAGGAAGAGTGTATGCTGGTGAAAGTTGATATTAATTGCCATATTCAAGGGGACGTAGTTGTTGAATGCATCCATTTGGATGAAGATCTAGTACACGAGGAGATGATGTTTAGAGTTATGTTTCACACAACATTTGTTAGATCAAATATTATAATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCAAGGGACCAGCTCCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGGTGCTGATGCTGATGTCGTTGTCCCCAATCTTACCACAACCTTTGATGATGAAGATGAAAATGAAGCTGGAGTTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATTTTCAGTAATGCAATGGATGGGCAGGAAGCAAAGGGATCCAATCATCCTCAATTGATCAATCGTGCAGACCGTAAAGCAGATAGGAAGGAGGACTTTGATCCGCCTGCATTCCAAGATTGTGCAACTGATGATGGAAATCTCAAGCATGTGAAGAAATCAGATTTTGATGCAGTGAAGGACATTGCTGTGGATGATGTGAAGTACAAGCTGGATGAAAATATATATTCCAACCTTAATGCTGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTCCTGGTTGCTGCTGCTAATGTCTTGACTCATGTGAAAGCCCAGGGGTTGGTAGATGCCGCATATGGAAAAGTTGAAGATAATGAAGAAAAGGATGATGGAAGAGGTGCTGCACCTGCGAAATTGGAAAACAAGGTTCTTCAGAAAAAGTTGAGTGCTGATGGTTCTAGACAAAAATCTGAAAAATTGCAAACACCAATCCCCAAGAAACAGCCTATCCCAAGTGGAAAACCTACCACTGATATGGTTTCAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTTTCTGCAAAACAAGCAAAGCCGAATGCAGCTTCTAGGTGGATTCCTCCTAACAAAGGCTCTTATATGAACTCTATGCATGTATCCTATCCTCCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCCTGTATTGCACCATCAAAGGATACAAGTGCAAATTCCAAAACAAAGGGTGCTGCCACCCTTGATTCTCTGGTTTCTACATATTTATTTAGTGAACGAAAAGATCAAAAAGTGGATTCTGTAAGGTCTTCACACTCTGCACCTGGGGAACTCATGCATGGCGCACCATCTCCAGTTGAGTCAATTGAGGAAGCAGATTCTTCCTCTGAAACTCCAAAACCATCACAAAGTGATTCACAACTTGAAGTAACACCTCCTCCCCTTCCCACAAAACCTCCATCTCCACATTTACCATCACTCCCCAGGGTAGATGCAATACCTCCTCCACCTCCTCCACCACCCCCATCCTTGCACCATATGGAGTCGACATACTCTGTTCCACCACTTTCTGTGTCTTTAGCACCACCACCCATTGCTAACTCATCAAAGGCAGTGACTCCCCCTCTCCCTCCCCCTCCTCCATTCAGTAGGCAGAACAGTGAGATACTTTTGCCCATTTCTTCTACACAGTCATCATGGGAGCAAAGATATTCTTCTGTTTCTAGTGTAAAGGTGGCTGGTTCTGTACCTCCTCCACCTGCACCCCCATCTCGACCTCGACCTCACTCTGTGGCCATGCCATCTACATTAAAGAATATTGCAAGTATTCCTCGTGTACCTGTTGTATCTCCTCCTTCAGCATTTCTTTCATTGGCATATAAAGGTATATTGCTATCATCACCCCCACCTCCCCCTCTTTCTAGGATACATGAACTACTTTCTCCACCATCTTCACCACACCTGCCTGCTCCAATATGCGGTGGTAAAACACCCCCACCTATTACTTCAGTTCATAGTGCACCCCCACCCCCACCTATTACTTCAGTTCATAGTGCACCCCCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCCCACCCCCATTAATGCAAGGGGCACTTCCTTCACCATCTCCAGGGGAAGGAACTCCACCCCCACCCACGCATGGTGTATCTCCAACACTACCTTTATTACATGGAGCACCACAGCCTCCCTCACCACCTCCTCCCCCACCACCTTCAAGTTATGGAGCACCTCCTCCTCCACCCCTTCCAATGTTTGGAGCACCCCCTCCTTTGATCCCTCCCATGCAAATGCAGAGGAGACCTCCTACACCTCCTCCATCGCCTCCAATGCATGGGTCTCCTCCACCAATGAATGCAACTCCACCGCCTCCCGTACGTGGGGCTTCTCCACCACCCCCACCTCCACTAATGCATGTGGCTCCTCTACCATCGCCACCGCCACCAATGCTTGGGAATCCTCCTCCACCTCCACCTCCACCTCCACCAATGCACGGGAATCCTCCACCACCCCTGCCACCTCCACCAATGCATGGTGCTCCTCCACCACCCCCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCCTCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCTACCCCTCCACCCCCACCGCCACCCTCAGCCGGGGATGGTGGAGCCCCTCCACCACCTCCGCCACCCGGGGGTGGTGGAATCCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGAGCTCCCGCACCACCTCCGCCACCCGGGGGTGGTGGAGTCCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGAGCTCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGGGCTCCCCCACCCCCTCCACCACCTGGGGGTGGTGGAGCTCCTGCACCCCCTCCTCCGCCAGGTGGTCATGCTCCAGCCCCACCTGGACCTCCAGGTGGTGGACCTCCTCCACCTCCACCGCTAGGTTCAAAAGGAGGAGCTGTTGCACCTCCTGACCCAAGAGGTTTGTCTGCTGGAAGGGGGCGTGGGCTAACACGCTCAGCTACTACTGCACCTCGAAGGTCCTCCTTGAAGCCTCTACATTGGAGCAAGGTTACAAGAGCTCTGCAAGGGAGCTTATGGGAAGAACTACAGAGATATGGCGAGACTCAAATGTATTTTGAATTCTCTTTTTATGTATCTTGCCGATTTGAATTGAAATTAATCCAGTCTTCCAAGAGGATATTTCTCAGTACTTTTAATGATTTTATGCTGTTTGCTTCTTATTGGTGCTTCCTTTTCCTCCCTCTCCTCAGTGCATCAGAGTTTGATGTGACCGAGATAGAGACTCTCTTTTCTGCAACTGTTCCCAAACCTGCTGATGGAGGCAAATCTCGAAGGAAGTCTGCTGGATCCAAAACTGACAAAGTTCATCTGGTAATTTTATAG 4104 48.56 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFTEGGKRSQVSDVLSQYDMTVMDYPRQYEGCPLLPLEMVHHFLRSSESWLSLQGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPADTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSIPANRTSKLLFSTSINRKHIRNYQQEECMLVKVDINCHIQGDVVVECIHLDEDLVHEEMMFRVMFHTTFVRSNIIMLNRDEVDVLWDARDQLPKDFRVEALFLGADADVVVPNLTTTFDDEDENEAGVASPEEFFEVEEIFSNAMDGQEAKGSNHPQLINRADRKADRKEDFDPPAFQDCATDDGNLKHVKKSDFDAVKDIAVDDVKYKLDENIYSNLNAVKDIAVDDGDMNSNSFLVAAANVLTHVKAQGLVDAAYGKVEDNEEKDDGRGAAPAKLENKVLQKKLSADGSRQKSEKLQTPIPKKQPIPSGKPTTDMVSAKQKVKQQETQGFSAKQAKPNAASRWIPPNKGSYMNSMHVSYPPSRYNSAPAALACIAPSKDTSANSKTKGAATLDSLVSTYLFSERKDQKVDSVRSSHSAPGELMHGAPSPVESIEEADSSSETPKPSQSDSQLEVTPPPLPTKPPSPHLPSLPRVDAIPPPPPPPPPSLHHMESTYSVPPLSVSLAPPPIANSSKAVTPPLPPPPPFSRQNSEILLPISSTQSSWEQRYSSVSSVKVAGSVPPPPAPPSRPRPHSVAMPSTLKNIASIPRVPVVSPPSAFLSLAYKGILLSSPPPPPLSRIHELLSPPSSPHLPAPICGGKTPPPITSVHSAPPPPPITSVHSAPPPXXXXXXXXXPPPPLMQGALPSPSPGEGTPPPPTHGVSPTLPLLHGAPQPPSPPPPPPPSSYGAPPPPPLPMFGAPPPLIPPMQMQRRPPTPPPSPPMHGSPPPMNATPPPPVRGASPPPPPPLMHVAPLPSPPPPMLGNPPPPPPPPPPMHGNPPPPLPPPPMHGAPPPPPPPPPMHGNPPPPSPPPPMHGNPPPPTPPPPPPPSAGDGGAPPPPPPPGGGGIPAPPPPPWGGGAPAPPPPPGGGGVPAPPPPPWGGGAPAPPPPPWGGGAPPPPPPPGGGGAPAPPPPPGGHAPAPPGPPGGGPPPPPPLGSKGGAVAPPDPRGLSAGRGRGLTRSATTAPRRSSLKPLHWSKVTRALQGSLWEELQRYGETQMYFEFSFYVSCRFELKLIQSSKRIFLSTFNDFMLFASYWCFLFLPLLSASEFDVTEIETLFSATVPKPADGGKSRRKSAGSKTDKVHLVIL 1367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 923749 929611 - CmoCh11G001890.1 Cmo11g00189 390808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 669 691 - -
Cmo11g00189 1367 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Cmo11g00189 1367 Gene3D Formin, FH2 domain 1236 1366 IPR042201 -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 692 725 - -
Cmo11g00189 1367 CDD PTP_PTEN-like 16 190 - -
Cmo11g00189 1367 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 748 765 - -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 576 601 - -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 795 809 - -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 615 637 - -
Cmo11g00189 1367 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 847 1248 - -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 730 746 - -
Cmo11g00189 1367 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 915 1218 - -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 497 564 - -
Cmo11g00189 1367 PANTHER FORMIN-J 1 1085 - -
Cmo11g00189 1367 PANTHER FORMIN-J 1078 1363 - -
Cmo11g00189 1367 SMART PTEN_C2_2 198 1287 IPR014020 -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 767 792 - -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 864 898 - -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 615 817 - -
Cmo11g00189 1367 Gene3D - 205 336 - -
Cmo11g00189 1367 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 583 597 - -
Cmo11g00189 1367 MobiDBLite consensus disorder prediction 546 564 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00847 Cmo-Chr1:4495760 Cmo11g00189 Cmo-Chr11:923749 2.86E-24 dispersed
Cmo10g00505 Cmo-Chr10:2257120 Cmo11g00189 Cmo-Chr11:923749 1.58E-08 dispersed
Cmo11g00189 Cmo-Chr11:923749 Cmo13g01141 Cmo-Chr13:9242670 9.72E-21 dispersed
Cmo11g00189 Cmo-Chr11:923749 Cmo10g00227 Cmo-Chr10:985213 1.65E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00189 - - cpep:111792358 1681.0