Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00189 | ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATATCCGAGAGAGTCTATGTGTTCGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCTGATGCGTCTTTCATGGTTTTCAACTTCACAGAAGGTGGTAAGCGAAGTCAAGTTTCTGATGTACTGAGTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATACGAGGGATGTCCTTTATTGCCATTGGAGATGGTTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCGCTGCAGGGTCAACAGAATGTGTTATTGATGCATTGTGAAAGGGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGAAAACAGTACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTCTTATCTCCTTTAAACCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAACTTAGGTTCTGATTGGCCTCCGGCAGATACACCCCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGACGGGGGAAAAGGGTGTAGGCCTGTTGTGCGTGTCTATGGTCAAGACCCCTCAATACCGGCCAATAGAACTTCAAAGCTTTTATTTTCAACATCTATCAACAGAAAACATATCCGAAACTACCAACAGGAAGAGTGTATGCTGGTGAAAGTTGATATTAATTGCCATATTCAAGGGGACGTAGTTGTTGAATGCATCCATTTGGATGAAGATCTAGTACACGAGGAGATGATGTTTAGAGTTATGTTTCACACAACATTTGTTAGATCAAATATTATAATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCAAGGGACCAGCTCCCTAAGGACTTCAGAGTTGAGGCACTCTTTTTGGGTGCTGATGCTGATGTCGTTGTCCCCAATCTTACCACAACCTTTGATGATGAAGATGAAAATGAAGCTGGAGTTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATTTTCAGTAATGCAATGGATGGGCAGGAAGCAAAGGGATCCAATCATCCTCAATTGATCAATCGTGCAGACCGTAAAGCAGATAGGAAGGAGGACTTTGATCCGCCTGCATTCCAAGATTGTGCAACTGATGATGGAAATCTCAAGCATGTGAAGAAATCAGATTTTGATGCAGTGAAGGACATTGCTGTGGATGATGTGAAGTACAAGCTGGATGAAAATATATATTCCAACCTTAATGCTGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTCCTGGTTGCTGCTGCTAATGTCTTGACTCATGTGAAAGCCCAGGGGTTGGTAGATGCCGCATATGGAAAAGTTGAAGATAATGAAGAAAAGGATGATGGAAGAGGTGCTGCACCTGCGAAATTGGAAAACAAGGTTCTTCAGAAAAAGTTGAGTGCTGATGGTTCTAGACAAAAATCTGAAAAATTGCAAACACCAATCCCCAAGAAACAGCCTATCCCAAGTGGAAAACCTACCACTGATATGGTTTCAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTTTCTGCAAAACAAGCAAAGCCGAATGCAGCTTCTAGGTGGATTCCTCCTAACAAAGGCTCTTATATGAACTCTATGCATGTATCCTATCCTCCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCCTGTATTGCACCATCAAAGGATACAAGTGCAAATTCCAAAACAAAGGGTGCTGCCACCCTTGATTCTCTGGTTTCTACATATTTATTTAGTGAACGAAAAGATCAAAAAGTGGATTCTGTAAGGTCTTCACACTCTGCACCTGGGGAACTCATGCATGGCGCACCATCTCCAGTTGAGTCAATTGAGGAAGCAGATTCTTCCTCTGAAACTCCAAAACCATCACAAAGTGATTCACAACTTGAAGTAACACCTCCTCCCCTTCCCACAAAACCTCCATCTCCACATTTACCATCACTCCCCAGGGTAGATGCAATACCTCCTCCACCTCCTCCACCACCCCCATCCTTGCACCATATGGAGTCGACATACTCTGTTCCACCACTTTCTGTGTCTTTAGCACCACCACCCATTGCTAACTCATCAAAGGCAGTGACTCCCCCTCTCCCTCCCCCTCCTCCATTCAGTAGGCAGAACAGTGAGATACTTTTGCCCATTTCTTCTACACAGTCATCATGGGAGCAAAGATATTCTTCTGTTTCTAGTGTAAAGGTGGCTGGTTCTGTACCTCCTCCACCTGCACCCCCATCTCGACCTCGACCTCACTCTGTGGCCATGCCATCTACATTAAAGAATATTGCAAGTATTCCTCGTGTACCTGTTGTATCTCCTCCTTCAGCATTTCTTTCATTGGCATATAAAGGTATATTGCTATCATCACCCCCACCTCCCCCTCTTTCTAGGATACATGAACTACTTTCTCCACCATCTTCACCACACCTGCCTGCTCCAATATGCGGTGGTAAAACACCCCCACCTATTACTTCAGTTCATAGTGCACCCCCACCCCCACCTATTACTTCAGTTCATAGTGCACCCCCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCCCACCCCCATTAATGCAAGGGGCACTTCCTTCACCATCTCCAGGGGAAGGAACTCCACCCCCACCCACGCATGGTGTATCTCCAACACTACCTTTATTACATGGAGCACCACAGCCTCCCTCACCACCTCCTCCCCCACCACCTTCAAGTTATGGAGCACCTCCTCCTCCACCCCTTCCAATGTTTGGAGCACCCCCTCCTTTGATCCCTCCCATGCAAATGCAGAGGAGACCTCCTACACCTCCTCCATCGCCTCCAATGCATGGGTCTCCTCCACCAATGAATGCAACTCCACCGCCTCCCGTACGTGGGGCTTCTCCACCACCCCCACCTCCACTAATGCATGTGGCTCCTCTACCATCGCCACCGCCACCAATGCTTGGGAATCCTCCTCCACCTCCACCTCCACCTCCACCAATGCACGGGAATCCTCCACCACCCCTGCCACCTCCACCAATGCATGGTGCTCCTCCACCACCCCCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCCTCGCCACCTCCACCAATGCATGGGAATCCTCCACCACCTACCCCTCCACCCCCACCGCCACCCTCAGCCGGGGATGGTGGAGCCCCTCCACCACCTCCGCCACCCGGGGGTGGTGGAATCCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGAGCTCCCGCACCACCTCCGCCACCCGGGGGTGGTGGAGTCCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGAGCTCCCGCACCCCCTCCGCCACCCTGGGGTGGTGGGGCTCCCCCACCCCCTCCACCACCTGGGGGTGGTGGAGCTCCTGCACCCCCTCCTCCGCCAGGTGGTCATGCTCCAGCCCCACCTGGACCTCCAGGTGGTGGACCTCCTCCACCTCCACCGCTAGGTTCAAAAGGAGGAGCTGTTGCACCTCCTGACCCAAGAGGTTTGTCTGCTGGAAGGGGGCGTGGGCTAACACGCTCAGCTACTACTGCACCTCGAAGGTCCTCCTTGAAGCCTCTACATTGGAGCAAGGTTACAAGAGCTCTGCAAGGGAGCTTATGGGAAGAACTACAGAGATATGGCGAGACTCAAATGTATTTTGAATTCTCTTTTTATGTATCTTGCCGATTTGAATTGAAATTAATCCAGTCTTCCAAGAGGATATTTCTCAGTACTTTTAATGATTTTATGCTGTTTGCTTCTTATTGGTGCTTCCTTTTCCTCCCTCTCCTCAGTGCATCAGAGTTTGATGTGACCGAGATAGAGACTCTCTTTTCTGCAACTGTTCCCAAACCTGCTGATGGAGGCAAATCTCGAAGGAAGTCTGCTGGATCCAAAACTGACAAAGTTCATCTGGTAATTTTATAG | 4104 | 48.56 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFTEGGKRSQVSDVLSQYDMTVMDYPRQYEGCPLLPLEMVHHFLRSSESWLSLQGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPADTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSIPANRTSKLLFSTSINRKHIRNYQQEECMLVKVDINCHIQGDVVVECIHLDEDLVHEEMMFRVMFHTTFVRSNIIMLNRDEVDVLWDARDQLPKDFRVEALFLGADADVVVPNLTTTFDDEDENEAGVASPEEFFEVEEIFSNAMDGQEAKGSNHPQLINRADRKADRKEDFDPPAFQDCATDDGNLKHVKKSDFDAVKDIAVDDVKYKLDENIYSNLNAVKDIAVDDGDMNSNSFLVAAANVLTHVKAQGLVDAAYGKVEDNEEKDDGRGAAPAKLENKVLQKKLSADGSRQKSEKLQTPIPKKQPIPSGKPTTDMVSAKQKVKQQETQGFSAKQAKPNAASRWIPPNKGSYMNSMHVSYPPSRYNSAPAALACIAPSKDTSANSKTKGAATLDSLVSTYLFSERKDQKVDSVRSSHSAPGELMHGAPSPVESIEEADSSSETPKPSQSDSQLEVTPPPLPTKPPSPHLPSLPRVDAIPPPPPPPPPSLHHMESTYSVPPLSVSLAPPPIANSSKAVTPPLPPPPPFSRQNSEILLPISSTQSSWEQRYSSVSSVKVAGSVPPPPAPPSRPRPHSVAMPSTLKNIASIPRVPVVSPPSAFLSLAYKGILLSSPPPPPLSRIHELLSPPSSPHLPAPICGGKTPPPITSVHSAPPPPPITSVHSAPPPXXXXXXXXXPPPPLMQGALPSPSPGEGTPPPPTHGVSPTLPLLHGAPQPPSPPPPPPPSSYGAPPPPPLPMFGAPPPLIPPMQMQRRPPTPPPSPPMHGSPPPMNATPPPPVRGASPPPPPPLMHVAPLPSPPPPMLGNPPPPPPPPPPMHGNPPPPLPPPPMHGAPPPPPPPPPMHGNPPPPSPPPPMHGNPPPPTPPPPPPPSAGDGGAPPPPPPPGGGGIPAPPPPPWGGGAPAPPPPPGGGGVPAPPPPPWGGGAPAPPPPPWGGGAPPPPPPPGGGGAPAPPPPPGGHAPAPPGPPGGGPPPPPPLGSKGGAVAPPDPRGLSAGRGRGLTRSATTAPRRSSLKPLHWSKVTRALQGSLWEELQRYGETQMYFEFSFYVSCRFELKLIQSSKRIFLSTFNDFMLFASYWCFLFLPLLSASEFDVTEIETLFSATVPKPADGGKSRRKSAGSKTDKVHLVIL | 1367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 923749 | 929611 | - | CmoCh11G001890.1 | Cmo11g00189 | 390808 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 669 | 691 | - | - | |
Cmo11g00189 | 1367 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 336 | IPR035892 | - | |
Cmo11g00189 | 1367 | Gene3D | Formin, FH2 domain | 1236 | 1366 | IPR042201 | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 692 | 725 | - | - | |
Cmo11g00189 | 1367 | CDD | PTP_PTEN-like | 16 | 190 | - | - | |
Cmo11g00189 | 1367 | Pfam | C2 domain of PTEN tumour-suppressor protein | 200 | 336 | IPR014020 | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 748 | 765 | - | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 576 | 601 | - | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 795 | 809 | - | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 615 | 637 | - | - | |
Cmo11g00189 | 1367 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 204 | IPR029021 | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 847 | 1248 | - | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 730 | 746 | - | - | |
Cmo11g00189 | 1367 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 915 | 1218 | - | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 497 | 564 | - | - | |
Cmo11g00189 | 1367 | PANTHER | FORMIN-J | 1 | 1085 | - | - | |
Cmo11g00189 | 1367 | PANTHER | FORMIN-J | 1078 | 1363 | - | - | |
Cmo11g00189 | 1367 | SMART | PTEN_C2_2 | 198 | 1287 | IPR014020 | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 767 | 792 | - | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 864 | 898 | - | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 615 | 817 | - | - | |
Cmo11g00189 | 1367 | Gene3D | - | 205 | 336 | - | - | |
Cmo11g00189 | 1367 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 13 | 188 | IPR029021 | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 583 | 597 | - | - | |
Cmo11g00189 | 1367 | MobiDBLite | consensus disorder prediction | 546 | 564 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00847 | Cmo-Chr1:4495760 | Cmo11g00189 | Cmo-Chr11:923749 | 2.86E-24 | dispersed | |
Cmo10g00505 | Cmo-Chr10:2257120 | Cmo11g00189 | Cmo-Chr11:923749 | 1.58E-08 | dispersed | |
Cmo11g00189 | Cmo-Chr11:923749 | Cmo13g01141 | Cmo-Chr13:9242670 | 9.72E-21 | dispersed | |
Cmo11g00189 | Cmo-Chr11:923749 | Cmo10g00227 | Cmo-Chr10:985213 | 1.65E-36 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00189 | - | - | cpep:111792358 | 1681.0 |