Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00197 | ATGAGCCTCCATGATGCTCTTGACCTTGGGCGAGAAGAGGGAGTAGACGGTGGACTGTCTTTTGGCAACTTCAAGCTGAGCCTTGCCGTCGGCGTAGGCGACGACGATGGACGAAGGATCGGAAAGGTTCCGGTTATGGCGGAAGCCGTCAACGGCGCGTCGTTTGGCGTACTCTCTGATGTTGTAATCACAGAAGTGACGGGCTGTACGGAGCAGAGAGCGAAGAAGCGAAAGGGATTCGGATCTCGTTGGAGTCGCCATTCTCGAAGGCGTGCTAAGACGATAGCGCAAAATCGTATGATCTCCCACCTAATTAAATTTCAATCTCAGCTTTCTCTCGATTATTACCAGAAAACTTGCCCCGATTTTGCACAGATCGTTCATGACACTGTTGCTCGCAAGCACGCTACTAGCCCTGTCACCGCCGCTGCATCTATGCGCCTTTTGTTCAGCGATTGTTTGGTTGGAGGCTGCGATGGCTCTGTTCTTGTTTCATCCAATGTCTTCAACCACGCCGAGCGCGATGCTGAAGTCAACCGCGATCTTCCTGGTGATGCCTTTGACGTCGTCACTCGAGCGAAAATTACCTTAGAGCTCTCCTGCCCTGGGATCGTCTCTTGCTCCGACGTGTTAGCGCAGGCGACTAGAGATCTCATCGCGGCCGCGGGCGGACCATCGTACAAAGTTGAATTAGGGCGAAAAGATAGCCTCGTCTCCAAAGTTTCGGACGTGGAAGGAAACATTCCGAAACCGAATCAATCAATCGACGACGACCGGCTCTTCAATTTCAACAAAAACACACCAACAGATCCTGAGATTAATTCAAAATACGCGGAAGCGTTGAAGAAGTCCTGCGCCGATTACGAGAAGAATCCAGCAAGTTCGGCGTACAGCGACCCTGTAACGCCAGGGAAGTTCGACAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTTGGCGTCGGATCACGCGCTGGTGAAGGATCCGAGAACAAGGAAATTCGTGGAGATGTATGCAGGAAACCAGGCATTATTCTTCAAGGATTTTGGAGAGGCGATGGAGAAGATGAGTGTTCGCGAGAACCTCTCCCATCCACCCACCTGCACTTCACAACAATACCTTGCAATGGGTTTGATTCATTGCTTCCTTCTTCCTCCTCACCACACTACACACATCCCTTCCACTTTTCCACATCCAGAGGAAGCAGGTTTTCCCCCGCCTCCTTCCTCTACCGCCATGGCCTTCTTTCACCCTGCCGCTCTTCTTCTACTTTTCCTATCTCTTCCATTCTCAGTTCAATCTCAGCTTTCTCTCGATTATTACCAGAAAACTTGCCCCGATTTCGCACAGATCGTTCATGACACTGTTGCTCGCAAGCACGCTACTAGCCCTGTCACCGCCGCTGCATCTATGCGACTCTTCTTCAGCGATTGTTTGGTTGGAGGCTGCGATGGCTCTGTTCTTGTTTCATCTAATGTCTTCAACCACGCCGAGCGCGATGCTGAAATCAACCGCGATCTTCCTGGTGACGCCTTCGACGTCGTCACTCGAGCGAAGATCACCTTAGAGCTCTCCTGCCCTGGGATTGTCTCTTGCTCCGACGTGTTAGCGCAAGCGACTAGAGATCTCATCGCGGCTACAGGCGGACCATCGTACAAAGTTGAATTAGGGCGAAAAGATAGCCTCGTCTCCAAAGTTTCGGACGTGGAAGGCAACATTCCGAAACCGAATCAATCAATCGACGAGTTGATCAAGCTATACACAGCGAAAGGCTTCACGATTCAAGAAATGGTAGCGCTATATGGCGGACGCACGATCGGGTTCTCAAATTGCAAGGAATTCAGCGACCGGCTCTTCAATTTCAGCAAAAACACACCAACAGATCCTGAGATTAATTCGAAATACGCGGAAGCGTTGAAGAAATCCTGCGCCGATTACGAGAAGAATTCAGGAAGTTCGGCGTACAGCGACCCTGTAACGCCAGGGAAGTTCGACAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTTGGCGTCGGATCACGCGCTGGTGAAGGATCCTAGGACAAGGAAATTCGTGGAGATGTATGCAGGAAACCAGGCATTATTCTTCAAGGATTTCGGACACGCGATGGAGAAGATGAGCGTTCGAGAGGTGAAAACTGACGGGAAAGGAGAAGTGAGGACAAGATGCGATGCATTCAATTCAATCAACCATTAA | 2232 | 50.54 | MSLHDALDLGREEGVDGGLSFGNFKLSLAVGVGDDDGRRIGKVPVMAEAVNGASFGVLSDVVITEVTGCTEQRAKKRKGFGSRWSRHSRRRAKTIAQNRMISHLIKFQSQLSLDYYQKTCPDFAQIVHDTVARKHATSPVTAAASMRLLFSDCLVGGCDGSVLVSSNVFNHAERDAEVNRDLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAAAGGPSYKVELGRKDSLVSKVSDVEGNIPKPNQSIDDDRLFNFNKNTPTDPEINSKYAEALKKSCADYEKNPASSAYSDPVTPGKFDNVYYQNLLRGMGLLASDHALVKDPRTRKFVEMYAGNQALFFKDFGEAMEKMSVRENLSHPPTCTSQQYLAMGLIHCFLLPPHHTTHIPSTFPHPEEAGFPPPPSSTAMAFFHPAALLLLFLSLPFSVQSQLSLDYYQKTCPDFAQIVHDTVARKHATSPVTAAASMRLFFSDCLVGGCDGSVLVSSNVFNHAERDAEINRDLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAATGGPSYKVELGRKDSLVSKVSDVEGNIPKPNQSIDELIKLYTAKGFTIQEMVALYGGRTIGFSNCKEFSDRLFNFSKNTPTDPEINSKYAEALKKSCADYEKNSGSSAYSDPVTPGKFDNVYYQNLLRGMGLLASDHALVKDPRTRKFVEMYAGNQALFFKDFGHAMEKMSVREVKTDGKGEVRTRCDAFNSINH | 743 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 964110 | 968874 | - | CmoCh11G001970.1 | Cmo11g00197 | 390816 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00197 | 743 | Gene3D | Peroxidase, domain 2 | 255 | 358 | - | - | |
Cmo11g00197 | 743 | ProSiteProfiles | Plant heme peroxidase family profile. | 110 | 381 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | CDD | secretory_peroxidase | 437 | 738 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo11g00197 | 743 | SUPERFAMILY | Heme-dependent peroxidases | 110 | 362 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | Pfam | Peroxidase | 134 | 257 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | Pfam | Peroxidase | 461 | 702 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | Pfam | Peroxidase | 263 | 342 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Plant peroxidase signature | 550 | 565 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Plant peroxidase signature | 657 | 672 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Plant peroxidase signature | 512 | 525 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Plant peroxidase signature | 597 | 609 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Plant peroxidase signature | 471 | 491 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Plant peroxidase signature | 673 | 690 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Plant peroxidase signature | 447 | 466 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Plant peroxidase signature | 531 | 541 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PANTHER | PEROXIDASE 41 | 258 | 362 | - | - | |
Cmo11g00197 | 743 | Gene3D | Peroxidase, domain 2 | 576 | 718 | - | - | |
Cmo11g00197 | 743 | SUPERFAMILY | Heme-dependent peroxidases | 437 | 739 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | ProSiteProfiles | Plant heme peroxidase family profile. | 437 | 739 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PANTHER | - | 258 | 362 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | Gene3D | - | 441 | 739 | - | - | |
Cmo11g00197 | 743 | CDD | secretory_peroxidase | 110 | 359 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo11g00197 | 743 | Gene3D | - | 111 | 254 | - | - | |
Cmo11g00197 | 743 | PANTHER | PEROXIDASE 41 | 422 | 742 | - | - | |
Cmo11g00197 | 743 | PANTHER | PEROXIDASE 41 | 102 | 257 | - | - | |
Cmo11g00197 | 743 | PRINTS | Haem peroxidase superfamily signature | 550 | 562 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Haem peroxidase superfamily signature | 469 | 483 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Haem peroxidase superfamily signature | 598 | 613 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Haem peroxidase superfamily signature | 659 | 674 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PRINTS | Haem peroxidase superfamily signature | 532 | 549 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PANTHER | - | 422 | 742 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo11g00197 | 743 | PANTHER | - | 102 | 257 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00159 | Cmo-Chr10:719459 | Cmo11g00197 | Cmo-Chr11:964110 | 8.95E-134 | dispersed | |
Cmo11g00120 | Cmo-Chr11:623106 | Cmo11g00197 | Cmo-Chr11:964110 | 1.33E-172 | dispersed | |
Cmo11g00197 | Cmo-Chr11:964110 | Cmo11g01203 | Cmo-Chr11:7087447 | 8.23E-168 | dispersed | |
Cmo11g00197 | Cmo-Chr11:964110 | Cmo11g00119 | Cmo-Chr11:619758 | 9.20E-174 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00197 | K00430 | - | csv:101213178 | 546.584 |