Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00197 ATGAGCCTCCATGATGCTCTTGACCTTGGGCGAGAAGAGGGAGTAGACGGTGGACTGTCTTTTGGCAACTTCAAGCTGAGCCTTGCCGTCGGCGTAGGCGACGACGATGGACGAAGGATCGGAAAGGTTCCGGTTATGGCGGAAGCCGTCAACGGCGCGTCGTTTGGCGTACTCTCTGATGTTGTAATCACAGAAGTGACGGGCTGTACGGAGCAGAGAGCGAAGAAGCGAAAGGGATTCGGATCTCGTTGGAGTCGCCATTCTCGAAGGCGTGCTAAGACGATAGCGCAAAATCGTATGATCTCCCACCTAATTAAATTTCAATCTCAGCTTTCTCTCGATTATTACCAGAAAACTTGCCCCGATTTTGCACAGATCGTTCATGACACTGTTGCTCGCAAGCACGCTACTAGCCCTGTCACCGCCGCTGCATCTATGCGCCTTTTGTTCAGCGATTGTTTGGTTGGAGGCTGCGATGGCTCTGTTCTTGTTTCATCCAATGTCTTCAACCACGCCGAGCGCGATGCTGAAGTCAACCGCGATCTTCCTGGTGATGCCTTTGACGTCGTCACTCGAGCGAAAATTACCTTAGAGCTCTCCTGCCCTGGGATCGTCTCTTGCTCCGACGTGTTAGCGCAGGCGACTAGAGATCTCATCGCGGCCGCGGGCGGACCATCGTACAAAGTTGAATTAGGGCGAAAAGATAGCCTCGTCTCCAAAGTTTCGGACGTGGAAGGAAACATTCCGAAACCGAATCAATCAATCGACGACGACCGGCTCTTCAATTTCAACAAAAACACACCAACAGATCCTGAGATTAATTCAAAATACGCGGAAGCGTTGAAGAAGTCCTGCGCCGATTACGAGAAGAATCCAGCAAGTTCGGCGTACAGCGACCCTGTAACGCCAGGGAAGTTCGACAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTTGGCGTCGGATCACGCGCTGGTGAAGGATCCGAGAACAAGGAAATTCGTGGAGATGTATGCAGGAAACCAGGCATTATTCTTCAAGGATTTTGGAGAGGCGATGGAGAAGATGAGTGTTCGCGAGAACCTCTCCCATCCACCCACCTGCACTTCACAACAATACCTTGCAATGGGTTTGATTCATTGCTTCCTTCTTCCTCCTCACCACACTACACACATCCCTTCCACTTTTCCACATCCAGAGGAAGCAGGTTTTCCCCCGCCTCCTTCCTCTACCGCCATGGCCTTCTTTCACCCTGCCGCTCTTCTTCTACTTTTCCTATCTCTTCCATTCTCAGTTCAATCTCAGCTTTCTCTCGATTATTACCAGAAAACTTGCCCCGATTTCGCACAGATCGTTCATGACACTGTTGCTCGCAAGCACGCTACTAGCCCTGTCACCGCCGCTGCATCTATGCGACTCTTCTTCAGCGATTGTTTGGTTGGAGGCTGCGATGGCTCTGTTCTTGTTTCATCTAATGTCTTCAACCACGCCGAGCGCGATGCTGAAATCAACCGCGATCTTCCTGGTGACGCCTTCGACGTCGTCACTCGAGCGAAGATCACCTTAGAGCTCTCCTGCCCTGGGATTGTCTCTTGCTCCGACGTGTTAGCGCAAGCGACTAGAGATCTCATCGCGGCTACAGGCGGACCATCGTACAAAGTTGAATTAGGGCGAAAAGATAGCCTCGTCTCCAAAGTTTCGGACGTGGAAGGCAACATTCCGAAACCGAATCAATCAATCGACGAGTTGATCAAGCTATACACAGCGAAAGGCTTCACGATTCAAGAAATGGTAGCGCTATATGGCGGACGCACGATCGGGTTCTCAAATTGCAAGGAATTCAGCGACCGGCTCTTCAATTTCAGCAAAAACACACCAACAGATCCTGAGATTAATTCGAAATACGCGGAAGCGTTGAAGAAATCCTGCGCCGATTACGAGAAGAATTCAGGAAGTTCGGCGTACAGCGACCCTGTAACGCCAGGGAAGTTCGACAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTTGGCGTCGGATCACGCGCTGGTGAAGGATCCTAGGACAAGGAAATTCGTGGAGATGTATGCAGGAAACCAGGCATTATTCTTCAAGGATTTCGGACACGCGATGGAGAAGATGAGCGTTCGAGAGGTGAAAACTGACGGGAAAGGAGAAGTGAGGACAAGATGCGATGCATTCAATTCAATCAACCATTAA 2232 50.54 MSLHDALDLGREEGVDGGLSFGNFKLSLAVGVGDDDGRRIGKVPVMAEAVNGASFGVLSDVVITEVTGCTEQRAKKRKGFGSRWSRHSRRRAKTIAQNRMISHLIKFQSQLSLDYYQKTCPDFAQIVHDTVARKHATSPVTAAASMRLLFSDCLVGGCDGSVLVSSNVFNHAERDAEVNRDLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAAAGGPSYKVELGRKDSLVSKVSDVEGNIPKPNQSIDDDRLFNFNKNTPTDPEINSKYAEALKKSCADYEKNPASSAYSDPVTPGKFDNVYYQNLLRGMGLLASDHALVKDPRTRKFVEMYAGNQALFFKDFGEAMEKMSVRENLSHPPTCTSQQYLAMGLIHCFLLPPHHTTHIPSTFPHPEEAGFPPPPSSTAMAFFHPAALLLLFLSLPFSVQSQLSLDYYQKTCPDFAQIVHDTVARKHATSPVTAAASMRLFFSDCLVGGCDGSVLVSSNVFNHAERDAEINRDLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAATGGPSYKVELGRKDSLVSKVSDVEGNIPKPNQSIDELIKLYTAKGFTIQEMVALYGGRTIGFSNCKEFSDRLFNFSKNTPTDPEINSKYAEALKKSCADYEKNSGSSAYSDPVTPGKFDNVYYQNLLRGMGLLASDHALVKDPRTRKFVEMYAGNQALFFKDFGHAMEKMSVREVKTDGKGEVRTRCDAFNSINH 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 964110 968874 - CmoCh11G001970.1 Cmo11g00197 390816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00197 743 Gene3D Peroxidase, domain 2 255 358 - -
Cmo11g00197 743 ProSiteProfiles Plant heme peroxidase family profile. 110 381 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 CDD secretory_peroxidase 437 738 IPR033905 GO:0004601|GO:0042744
Cmo11g00197 743 SUPERFAMILY Heme-dependent peroxidases 110 362 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 Pfam Peroxidase 134 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 Pfam Peroxidase 461 702 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 Pfam Peroxidase 263 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Plant peroxidase signature 550 565 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Plant peroxidase signature 657 672 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Plant peroxidase signature 512 525 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Plant peroxidase signature 597 609 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Plant peroxidase signature 471 491 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Plant peroxidase signature 673 690 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Plant peroxidase signature 447 466 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Plant peroxidase signature 531 541 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PANTHER PEROXIDASE 41 258 362 - -
Cmo11g00197 743 Gene3D Peroxidase, domain 2 576 718 - -
Cmo11g00197 743 SUPERFAMILY Heme-dependent peroxidases 437 739 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 ProSiteProfiles Plant heme peroxidase family profile. 437 739 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PANTHER - 258 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 Gene3D - 441 739 - -
Cmo11g00197 743 CDD secretory_peroxidase 110 359 IPR033905 GO:0004601|GO:0042744
Cmo11g00197 743 Gene3D - 111 254 - -
Cmo11g00197 743 PANTHER PEROXIDASE 41 422 742 - -
Cmo11g00197 743 PANTHER PEROXIDASE 41 102 257 - -
Cmo11g00197 743 PRINTS Haem peroxidase superfamily signature 550 562 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Haem peroxidase superfamily signature 469 483 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Haem peroxidase superfamily signature 598 613 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Haem peroxidase superfamily signature 659 674 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PRINTS Haem peroxidase superfamily signature 532 549 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PANTHER - 422 742 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00197 743 PANTHER - 102 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00159 Cmo-Chr10:719459 Cmo11g00197 Cmo-Chr11:964110 8.95E-134 dispersed
Cmo11g00120 Cmo-Chr11:623106 Cmo11g00197 Cmo-Chr11:964110 1.33E-172 dispersed
Cmo11g00197 Cmo-Chr11:964110 Cmo11g01203 Cmo-Chr11:7087447 8.23E-168 dispersed
Cmo11g00197 Cmo-Chr11:964110 Cmo11g00119 Cmo-Chr11:619758 9.20E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00197 K00430 - csv:101213178 546.584