Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00223 ATGGAAGTTAATACCTACAGTGATCTATCACACAAAATTCTTTTTCAAATGGAATGCTACTCGGCTCGACAGAAAAGAGTTGTACTCTTAGCACTTCTGATCTTTGCAACTTTCTATTCAACTGGGGCTTATGATCCATTGGATCCGAATGGAAACATAACAATCAAATGGGATGTAGTTTCTTGGACGCCAGATGGATATGTTGCTGTAGTGACAATGAACAATTTTCAGATGTACCGCCATATCAATGCACCAGGATGGACCCTGGGCTGGTCATGGGCCAAGAAAGAAGTGATATGGTCTATGGTGGGAGCTCAGACAACAGAGCAAGGAGATTGTTCCAAGTTCAAAGGAAACGTACCTCATTGCTGCAAGAAAACCCCTATAGTTGTTGATTTGCTCCCCGGTGTTCCTTACAACCAGCAATTCTCCAATTGCTGCAAGGGTGGAGTGTTGGCTTCTTGGGGACAGGACCCAGTAGGTTCAGTCTCTGCCTTCCAGGTGAGTGTTGGACTAGCTGGCACTTCGAACAAAACGGTAAAGTTGCCGAAGAACTTCACTCTGCTCGGTCCAGGACCAGGCTACACATGTGGACCTGCAAAAGTTGTGCCTTCTACAGTCTTCCTTACTCCTGATCGCCGGAGGAAAACTCAAGCACTGATGACATGGAATGTAACCTGCACTTACTCACAGTTTCTGGCCTCTAAGAACCCAACTTGCTGCGTATCACTCTCGACTTTCTACAATGATACGATCACTTCTTGCCCAACCTGTGCATGTGGCTGCCAGAACAAACACAATTGTATAAAGAGTAACTCAAAGCTACTGCACAAGGACGGAATAAATACTCCTAAAAAGGATAATACGCCTTTACTACAGTGCACCCATCACATGTGTCCTGTTCGAGTACACTGGCACGTAAAAATTAATTACAAGGATTACTGGCGTGTGAAGGTTGCTGTAACCAACTTCAACTACAGGATGAACTATACGCTATGGACACTGGCAGTGCAGCATCCAAATCTGAATAATGTAACTCAAGTCTTCAGTTTTGACTACAAACCCCTAGTTCCCTATGAATCCATTAATGATACTGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTGCAATCTGAAGTACTAATGAAGAAGGACAAGGATACATTTACCTTCAAGCAGGGTTGGGCCTTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCATACCCATATCTACCCAACTCTGCTCCTGAAGGCTCCAGTGCAGTTAGCAAGTTGACCACCTCCTTGCTTTTGATAATCTGGCTTTTGTGGTGA 1371 44.13 MEVNTYSDLSHKILFQMECYSARQKRVVLLALLIFATFYSTGAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMNNFQMYRHINAPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPIVVDLLPGVPYNQQFSNCCKGGVLASWGQDPVGSVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNDTITSCPTCACGCQNKHNCIKSNSKLLHKDGINTPKKDNTPLLQCTHHMCPVRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPYLPNSAPEGSSAVSKLTTSLLLIIWLLW 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1109123 1111432 - CmoCh11G002230.1 Cmo11g00223 390842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00223 456 PIRSF COBRA 11 456 IPR006918 GO:0010215|GO:0031225
Cmo11g00223 456 PANTHER COBRA-LIKE PROTEIN 27 453 - -
Cmo11g00223 456 PANTHER PROTEIN COBRA 27 453 IPR006918 GO:0010215|GO:0031225
Cmo11g00223 456 Pfam COBRA-like protein 67 230 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00306 Cmo11g00223 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00449 Cmo-Chr1:2164388 Cmo11g00223 Cmo-Chr11:1109123 0 dispersed
Cmo10g00306 Cmo-Chr10:1366269 Cmo11g00223 Cmo-Chr11:1109123 0 dispersed
Cmo11g00223 Cmo-Chr11:1109123 Cmo14g01186 Cmo-Chr14:9952375 0 dispersed
Cmo11g00221 Cmo-Chr11:1105614 Cmo11g00223 Cmo-Chr11:1109123 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00223 - - cmo:103494059 908.286