Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00300 ATGTTACTGGTGCTGTACAAGCGAACTCCCAAGACGTTAAGTTTTTTTGTACGAGTGGACCGCTTTACTTGGGATTGTGGAATTCGCCAGAGATTTCACATTGTGTCAAGAGTTGCTTTGAACATTGGTGTTAGTAAAGTCGTGTATCCGGTGTATCGAAACGCGATCGCTTTAGCTCTGTTGAGTCCTTTTGCCTATTTCCTTGAGAAGAATGAAAGGCCTCCTCTTACTTTTTCTTTGCTGTTTCAGTTCTTTCTTCTAGCTTTACTTGGAATCACTGCCAATCAAGGATTTTACCTCTTGGGGCTAAACAATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCTGTTCCTGCTATTACCTTTGTGATGGCTTCTGTTCTAAGGCTTGAGCAAATCAACTTCAGAAGGAGAGATGGGTTAGCAAAGCTTTTGGGAACTATTGGGAGTGTTGGAGGAGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTTTTCACAACTTACTAACTCAAGGAAGTAGCATCTTGGGGATGGATGAACCTACACTTAAAGTGCAGAACTGGAGATGGGGCTGCATATACCTGCTAGGCCACTGCCTATCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTGTGTTGAAAAAATATCCAGCAAAGCTAACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATTGCTGGCTTTGTGGAAACAGACTATCAGTACTGGAAAATCCAATCTGCAGAAGAACTCTTCACAATCTTATACGCTGGTGTTGTAGCCTCTGGCATTGTCATATCTCTCCAAACATGGTGCATTCAAAACAGTGATCCTGTCTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTAGTAGCCATCATGGCGTTTCTCATCCTCGGCGATCGGTTATTCTCCGGCGGGGTTATTGGAGCTGTTCTTATAACATTTGGTCTCTACTTAGTTTTGTGGGGAAAAAGTAAAGAAAAGGCATTGGAAGAAGAAGAAGACAAGTGTTTGAAACAGCCACTTTTGGAAGACCAAAAAGGGGACAAAGAAGACAACGTTGTTTCAGACATACCATGA 1107 42.82 MLLVLYKRTPKTLSFFVRVDRFTWDCGIRQRFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLFQFFLLALLGITANQGFYLLGLNNASPTFASAMQNSVPAITFVMASVLRLEQINFRRRDGLAKLLGTIGSVGGATVITLYRGPPLFHNLLTQGSSILGMDEPTLKVQNWRWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGVVASGIVISLQTWCIQNSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVLITFGLYLVLWGKSKEKALEEEEDKCLKQPLLEDQKGDKEDNVVSDIP 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1446008 1450897 + CmoCh11G003000.1 Cmo11g00300 390919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00300 368 PANTHER WAT1-RELATED PROTEIN 31 341 - -
Cmo11g00300 368 PANTHER WAT1-RELATED PROTEIN 31 341 IPR030184 GO:0016021|GO:0022857
Cmo11g00300 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 335 - -
Cmo11g00300 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
Cmo11g00300 368 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Cmo11g00300 368 Pfam EamA-like transporter family 51 158 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00123 Cmo-Chr9:572730 Cmo11g00300 Cmo-Chr11:1446008 9.59E-130 dispersed
Cmo11g00300 Cmo-Chr11:1446008 Cmo12g00386 Cmo-Chr12:2398747 1.45E-137 dispersed
Cmo11g00300 Cmo-Chr11:1446008 Cmo05g00280 Cmo-Chr5:1203071 5.92E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00300 - - cmos:111433746 660.218