Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00307 ATGGCTGGAAGTGATCAAGATATGGCTGTTCACGAACCTCAAAAATGTGCCAATAATGCCGATCACCAACAAAGACCTTGCTTTGATCCTTCTTCTCTTCTTTCTCCCAAGGCTGTGCCGCCCATCTCGGTGGCCGCGGAGAGCGATCATGCTCTCCGTCGACCTCGCGGGCGGCCAGCTGGCTCCAAGAACAAGCCCAAACCCCCCATTATTGTTACCCGAGATAGCGCTAATGCTCTCCGGGCTCATGCCATTGAGGTTAGCTCTGGTTGTGATGTCAATGAGAGTCTCTCTAGCTTCGCTCGGAGGAAGCAGCGTGGCGTTTGTATTCTTAGTGGAAGTGGTTGTGTCGTTAATGTCACACTTCGTCAAGCTGCTTCCTCGGGTGCCATTGTCACTCTCCATGGCCGCTTCGAGATCGTTTCATTATTGGGATCGATCTTGCCACCGCCAGCACCGCTGGGGATCACCGGTCTGACAATTTACTTGGCCGGCGCACAAGGGCAGGTGGTCGGTGGAGTCGTGGTGGGCGCGCTCATTGCCTCCGGCCCCGTTGTGATCATGGCAGCGACGTTCATGAACGCGACATTTGACCGTCTGCCATCTGACGACGACGAAGTGACAGCCGCCATGCATAGTCAACACTACGGCCAAAATGGGCGGAGCCACCACCACCTTGATGTTTCTGATCTTGCTGTTGCAGGCAGCTTTTTTACCGCTGAGGCGTGCTTGGAAGGGATTAAGCCATTGGCATCCAATTCTCTCATTGCCGCTAACTCTGTCAGCCACCATTTCGCCTTTTCTTTTCTGCGCCCCCTGTGCTTTCTTCTTCTTCTTCTTCTTCTTCCTCCCTTTGCTTCCTTTTTCGTTAACCCATTAATCGATCTTCCCTTCATTCCTCCGCCATTGATAGACTTCACTCATTCTTCCCCAATTTCTTTACCTAAATCGCATTCTCTTCGCCAATGTCTTCAATCCCACGAATCTTTTTGCTTTTCTCCCTCGGTTTCTCTCTTTTTCCCTCGTTTTTCTCTCTTCCCCATCCAGACCCACTTACAATCCGTCCATTTCAGGTTAACCAGTCGCCGCCAGCCACTATTCCGGCCTTCCCTGAACAATCCGACGTTCAGGGCTGCCCGGGGTGTCTCCGGGGAGCTCCATCGTAGCCGTTGCTGTCCGGTCTTGGCTGCTTGGCTCTACGCTGCTTACTCCGCTACCGCATTGCAGAGAGCTGGACGACCCGGCGCAGCTGCTGGCCACACTGCGCCGTCGTATGACCTGCCGCTTCTACCGGATGACTCCGAAACTTGCGTCAGTAACTTGGATCAAGCGTTGAATCAAAGGGGAATCGAGCTAATGAAACCTAATGAGACTTGTGATGTGGTTTATTGCTATTGCGGCATAAGATTACACCCTTTGAGCTGCCCTGAAGCGTTTTCAGTGAACCAGAATGGGATTCTTGAAGGTGATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGCAATGGTAATGTCAATGGATTTCCAGGGCTTGGTGGCTGTTCCAAATGCTTGAAAAGCCTTTATCAGCTCAACAACAAAGAAACTTTGAATTCAAGCAAGGCAGAGAACAGGACCACCAAGATGCACCACAAGGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACGGCGTATATCCACACCATTACATCGGTGCTTCGCGCTAAAATGATGAGCAAAGACGGGTCGGATCCTAAGTCGTGTACTCTCAACAGCGACGGAATGCCTCTGGCTGTGGATTCGGCCGAGATCTCAGGCAGTTCTGTGTCAACACCAATTCAGGCATCACTGAATCTCGGCCTGGTTTGGGCTGGTTTGTTGTACAATATGATGATGTGGGTATCTACACGATGA 1911 51.33 MAGSDQDMAVHEPQKCANNADHQQRPCFDPSSLLSPKAVPPISVAAESDHALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSSFARRKQRGVCILSGSGCVVNVTLRQAASSGAIVTLHGRFEIVSLLGSILPPPAPLGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDDEVTAAMHSQHYGQNGRSHHHLDVSDLAVAGSFFTAEACLEGIKPLASNSLIAANSVSHHFAFSFLRPLCFLLLLLLLPPFASFFVNPLIDLPFIPPPLIDFTHSSPISLPKSHSLRQCLQSHESFCFSPSVSLFFPRFSLFPIQTHLQSVHFRLTSRRQPLFRPSLNNPTFRAARGVSGELHRSRCCPVLAAWLYAAYSATALQRAGRPGAAAGHTAPSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSVNQNGILEGDRNVKRLERNCLSNGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKAENRTTKMHHKECQLMGLTWLLAKNRTAYIHTITSVLRAKMMSKDGSDPKSCTLNSDGMPLAVDSAEISGSSVSTPIQASLNLGLVWAGLLYNMMMWVSTR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1487679 1494096 - CmoCh11G003070.1 Cmo11g00307 390926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00307 636 Gene3D - 80 215 - -
Cmo11g00307 636 PANTHER PROTEIN, PUTATIVE-RELATED 381 625 - -
Cmo11g00307 636 CDD DUF296 81 163 IPR005175 -
Cmo11g00307 636 PANTHER GPI-ANCHORED PROTEIN 381 625 IPR040376 -
Cmo11g00307 636 MobiDBLite consensus disorder prediction 1 70 - -
Cmo11g00307 636 Pfam SPARK 384 549 IPR043891 -
Cmo11g00307 636 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 193 IPR005175 -
Cmo11g00307 636 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 207 - -
Cmo11g00307 636 ProSiteProfiles PPC domain profile profile. 77 215 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00348 Cmo11g00307 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00307 Cmo-Chr11:1487679 Cmo10g00349 Cmo-Chr10:1579520 6.89E-120 dispersed
Cmo19g00986 Cmo-Chr19:8839661 Cmo11g00307 Cmo-Chr11:1487679 8.57E-55 dispersed
Cmo10g00348 Cmo-Chr10:1576542 Cmo11g00307 Cmo-Chr11:1487679 2.39E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00307 - - csv:105434582 473.011