Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00404 ATGCAGAGACAGACAAGATATATGGAGAGGACGAACTCCATGAGAGAAAAAAGGGGCTTGGAGGGTGGAGATGATGAGCTGCCGGAGCGAAAGCGACCAGCTCTAGCTAGTGTGATTGTAGAAGCCCTGAAGGTGGATAGTTTACAAAAGCTCTTCTCATCAATGGAACCAATACTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTACTGGAAGGTCTTCTCCTAAAAGGATTGAAGGCCCTGATGGAAGAAACTTGCAACTGCATTTTAGGTCTAGATTGTCTCTTCCCCTGTTCACTGGAGGGAAAGTGGAAGGTGAACAGGGTGCAGCAATCCATGTTGTTCTGCTTGATGCCAACACAGGTCGTGTAGTAACATCTGGACCTGAATCCTTGTCAAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACGGAGGAAGACTTTGAAGGTCATGTGGTAAAAGAGCGTGAAGGAAAGAGGCCTCTATTGACCGGTGACCTGCAGGTTTCCCTCAAGGAAGGTGTTGGAACACTAGGGGATTTGACCTTCACTGATAACTCAAGTTGGATTAGGAGCAGAAAGTTCAGACTTGGGTTAAAGATGGCTTCAGGATTTTGTGAAGGTGTTCGTATTCGTGAAGCAAAAACTGAAGCTTTTACAGTTAAAGATCATCGAGGAGAACTGTATAAAAAACATTACCCACCTGCATTAAACGATGATGTGTGGAGATTAGAGAAGATTGGAAAGGATGGTTCCTTTCACAAACGACTAAATAAAAGTGGAATAGTCACTGTCGAAGACTTTCTCCGACTGGTAGTTCGAGATTCTCAAAGACTACGAAGTATCCTTGGAAGTGGTATGTCAAATAAGATGTGGGAGGCTCTCTTAGAACATGCTAAGACCTGTGTCCTGAGCGGGAAGTTGTATATTTATTATCCAGAGGAATCCAGAAATGTTGGTGTTGTTTTTAACAATATCTACGAGCTCAACGGCCTGATTGCAGAGGAACAATACTTTCCTGCTGATTCTCTGTCTGAGAGCCAGAAGGTTTATGTAGATACACTAGTGAATAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGGAAGTCACTTTTGAGCTCTAAGAAGCCAAAGAAGTCCAATGCATCCCGAAATGACTTTCAAGGAGGTCATCTTGATCTTTCTAATACTCATGTGTCAGTGCCCCGCATGCCAGTATCAGTTCAGCCTCAGCAGCCTATCGTGGATTCAGGACTCTCAGTTGCAGGGTATAATGATAATACAGCCACAAGATATTCAACCCAACCACAGTTTGTGAATTCAACTTCTCGACCCCAATTTGACAACTCCTCATTTACTCCAAATGAGTTGCTCGGCAATTCTAACCACGTTCATGTCACAAGAAATGACCCTAGTACTTTTGGTTTGGCTCTTGGTCCTCCGCAAGCATCGTCATCTTCAGGTTTTCAGCCGCTTGGTTCTTCTCTTCAGGAATCTAATATGAATCCATTTGACTGGTCAAACAATAGAGACAAGGTAGTGGATGACTTCTTTTCAGAGGATGAGATTCGTATGAGAAGTCACGAGATGCTGGAAAATGAAGATATGCAGCAATTGTTGCGAATGTTTAGCATGGGTGGCCATTCATCTGTTAACGTCCATGATGAGAGTTTTTCATTCCCATCATTCATGCCTTCACCAATGCCAAATTTTGATGATCGAAACCGTCCTGGAAAAGCTGTGGTAGGTTGGTTGAAGATCAAAGCTGCAATGAGGTGGGGCTTCTTCATCAGGAAGAAAGCAGCCGAGAGACGTGCACAGATTGTCGAGTTGGATGAGGAGTAG 1911 43.43 MQRQTRYMERTNSMREKRGLEGGDDELPERKRPALASVIVEALKVDSLQKLFSSMEPILRRVVSEEVERALAKIGPARITGRSSPKRIEGPDGRNLQLHFRSRLSLPLFTGGKVEGEQGAAIHVVLLDANTGRVVTSGPESLSKLDIVVLEGDFNNEDDEDWTEEDFEGHVVKEREGKRPLLTGDLQVSLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKMASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDDVWRLEKIGKDGSFHKRLNKSGIVTVEDFLRLVVRDSQRLRSILGSGMSNKMWEALLEHAKTCVLSGKLYIYYPEESRNVGVVFNNIYELNGLIAEEQYFPADSLSESQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKKPKKSNASRNDFQGGHLDLSNTHVSVPRMPVSVQPQQPIVDSGLSVAGYNDNTATRYSTQPQFVNSTSRPQFDNSSFTPNELLGNSNHVHVTRNDPSTFGLALGPPQASSSSGFQPLGSSLQESNMNPFDWSNNRDKVVDDFFSEDEIRMRSHEMLENEDMQQLLRMFSMGGHSSVNVHDESFSFPSFMPSPMPNFDDRNRPGKAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELDEE 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1990248 1997332 - CmoCh11G004040.1 Cmo11g00404 391023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00404 636 MobiDBLite consensus disorder prediction 393 417 - -
Cmo11g00404 636 MobiDBLite consensus disorder prediction 9 29 - -
Cmo11g00404 636 PANTHER CALMODULIN-BINDING PROTEIN 60 B 7 634 - -
Cmo11g00404 636 Pfam Calmodulin binding protein central domain 255 321 IPR046830 -
Cmo11g00404 636 Pfam Calmodulin binding protein C-terminal domain 326 388 IPR046829 -
Cmo11g00404 636 PANTHER OS02G0177800 PROTEIN 7 634 IPR012416 GO:0005516
Cmo11g00404 636 MobiDBLite consensus disorder prediction 1 29 - -
Cmo11g00404 636 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00441 Cmo11g00404 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g01099 Cmo-Chr5:8771263 Cmo11g00404 Cmo-Chr11:1990248 1.90E-66 dispersed
Cmo10g00154 Cmo-Chr10:706974 Cmo11g00404 Cmo-Chr11:1990248 1.05E-100 dispersed
Cmo11g00118 Cmo-Chr11:611915 Cmo11g00404 Cmo-Chr11:1990248 1.15E-106 dispersed
Cmo11g00404 Cmo-Chr11:1990248 Cmo13g01056 Cmo-Chr13:8797595 2.63E-98 dispersed
Cmo10g00441 Cmo-Chr10:1996992 Cmo11g00404 Cmo-Chr11:1990248 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00404 - - cmo:103494282 1147.11