Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00448 | ATGGATGTATGCGAATCGGCGCGGGCATTTAGAAAGCATACAGTAGCTGCGGCGCCAAGACAACCGTTGGTTCCTGCAGAAAAGAACAATGAAGTTATCACACGGTTTCCCTCGTGTTCCAAGAAAATGTCATCTTCTCCTTCATCCTTGTCTGGTCCTCGGCGTTGCCCATCACCAAGCATCACGCGGACGGTTCATACATCCTCCCAATTGGTTCTTAAAAGAGCTCAATCAGCAGAGAGGAAGCGACCGTCCACACCCCCTTCTCCAAGCCCGGCCGCACCGATTGATGGTTCACCAGCAGATTTACAGTTGCTATCGAAAAGAATGATTAGTGGTCGACCTGATAGCTTATGGCCCTCTACGATGAGAAGTTTGAGCGTCTCATTCCAATCTGATACAATTTCTATTCCTGTTAGTAAGAAGGGAAAACCCGTGTTATCATCTCCTTCTGATCGAACTCTTAGGCCTTCTTCCAATTTTCCTTCTAAGCAGGCCGAGACGCAAACTGTTGCAAGGAAGTCCGCGCCAGAAAGAAAGAGGAGTCCACTTAGAGGTAAAAATGGACACGATCAATCAGAGAATTTCAAACCAGTTGCTGGGTCACGTACCCAATTCATAGATCAGCATAGATGGCCTAGTCGAATTGGTGCGAAAGCATCCTCCAATTCATTAAATTGTTGCGTGGATCTCGCCGATAAAAGAGTCCCAATCTTAAATAAGCCACTTAGAGGAAGCGCATTATCTTGTACGGTCGAGACTGTTAGCAAACCTTTACAGAAATCGTCCAGTGGTGTTATGAGGCTATCATATGTTGATGGAAGGAGTAGAAAAGAATTTGAGGCAAATTCAGCCAATGACAATTCAATGCAGGAATCTGCAGCTAACAAGGTTGTTTCGTCAAGTTTATCAGACATAAAAATAACAACAAACCGAGTTGTGAGATATGACTCGCCTACTCTTGTCCCACGTCCATCCTCTGTTACTAGAAGAGCTAGTCCATCTCGAATGACACCATCAACTCCAACTCCTCGAGCAATTAGCTCATCACGAATCAGACCTTCAAATGCTACTCAACCCAATGTTTCAACTTCTGTTCTTAGTTTCATAGCAGATTTTAAGAAGGGAAAGAAGGCTACAAGCTATATAGAAGGTGCTCATCAGCTACGGCTTCTATACAATAGACATTTGCAATGGAGATGTGCTAATGCCCGCGCAGAGGCTGTTCTGCGTAATCAGGAGGTGGCGGCAGAGATGAGCTACCTCAACGAATGGGCAGTGCTTGAAAGAAGTCATAATCGATCCTTATCAGGTGTTATAGACGATTTGGAGTCGAGCACTCTTCGTGTTCCATTGACTGGAGGAGCAAAAGTAGATGCGGGCTCTTTAAATGATGCTATTTTTTCAGCCGTTGAGGTGATGCAAGCAATGGGATCCTCCATTTGCTCCATGCTCCCAAGGGTGGAGATAATGCAGACGTTGGTTATTGAACTTGCAATTTTAGCAGCCCAAGAAAAGGCTATGCTTGATGAATGTATAGCATTGTTGGCATCAACAGCAGCTTTGCAGGCTAAGCAAGCTAACAACAAAGCCCATTTTGTTACCTCACTGAAAGATGAGTCATTCTTCCAAATCAGTCTTCCCCCGCATCAAATCAACACAGTCTTCGACATCAACGTCAACGCCATTCTGAACGTAATGGCCGAGGCCAAGTGCAGGGGTGAAGAACTCTGTGTGGAACCAGTTGGCGGAGCCATGGAAGCCAGCGCAGGACTTGTCGCTGGTTCTCATAACCGCAATGAGCTTGTTGTCATTCATGGCCATGAGGAGCCGAAGCCATTGAAGAACTTGGATGGTCAAGTTTGTGAGATATGTGGCGACGAAGTGGGGCTTACTGTGGATGGTGATCTGTTTGTTGCCTGCAATGAATGTGGTTTTCCAGTCTGCAGACCTTGTTATGATCATATGGCAGAAGCTATGCTTCATGGAAAGATGAGCTACGGTAGAGGGCCAAATGATGATGAAAATGCACAGTATGGAAGAACAGAGCCAGAAAATGTTGAGCTTCCTTTATCATCCCAGGGTTATGGAGATCAGATATCATCTTCTTCACTGCACAAACGAGTGCATCCATTTCCAGCTTCTGAACCAGGCAGTGGAAGATGGGATGAAAAGAGAGAGGAAGGTTGGAAAGATAGAATGGATGATTGGAAATTGCAGCAAGGCAATCTTGGGCCTGAACCTGATGATGCCAATGACCCTGACATGGCTATGATTGATGCAGCTAGACAGCCACTATCAAGGAAGGTACCAATAGCATCTAGCAAAATTAATCCTTACCGAATGGTTATTGTGGCTCGGCTCGTTATTCTTGCCTTCTTCCTTCGGTATCGGATTCTAAATCCAGTGCATGATGCATTGGGTTTGTGGCTAACTTCTGTGATATGTGAAATCTGGTTTGCATTTTCGTGGATCCTCGATCAGTTCCCCAAATGGTTCCCAATCGATCGTGAAACCTACTTGGATCGTCTGTCCCTCAGGTATGAACGAGAGGGTGAACCTAATTTGCTTGCTCCAGTGGACATTTTTGTCAGTACTGTTGATCCGATGAAGGAACCTCCTCTTGTAACAGCTAACACAATCTTATCTATCTTGGCCATGGACTATCCAGTTGATAAGGTTTCATGCTACGTTTCAGATGATGGAGCTTCCATGCTTACCTTCGAAGCAATGTCTGAAACTGCAGAATTTGCCAGGAAATGGGTGCCCTTCTGTAAGAAGTTTTCGATAGAACCTCGAGCACCTGAAATGTACTTTTGTGAGAAGATCGATTATCTCAAGGATAAAGTCCAACCAACGTTTGTAAAGGAGCGTCGAGCAATGAAGAGAGAATATGAAGAATTCAAGGTCAGGATAAATGCCCAAGTAGCAAAAGCCATAAAAGTTCCCACAGAAGGATGGATAATGCAAGATGGAACACCATGGCCAGGCAACAACACAAAAGATCACCCTGGTATGATCCAAGTCTTTCTGGGTCACAGTGGAGGCCTTGATGCAGAAGGGAATGAACTCCCCCGCTTAGTGTACGTATCTCGTGAGAAAAGACCAGGTTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCCTTGATTCGTGTATCTGCAGTGCTTACAAACGCTCCATTCATGTTGAACTTGGATTGTGATCACTACATAAACAATAGCAAAGCAGCAAGAGAGGCAATGTGTTTCCTTATGGACCCTCAAGTTGGAAAGAAAGTCTGTTATGTACAATTTCCACAAAGATTTGATGGAATAGATAGGCATGATCGTTATGCCAACAGAAATACAGTCTTCTTTGATATTAACATGCGAGGTTTAGATGGAATTCAGGGACCTGTCTATGTCGGAACAGGGTGTGTCTTCAGGAGACAGGCTTTATATGGTTATGAACCCCCAAAAGGACCGAAGCGCCCAAAAATGGTATGCTGTGACTGTTGTCCATGCTTTGGACGTCGCAAGAAGCTTAAGAGCTCTAAAAGTGGGGTAGATGGAGATGCTGCAGCGATGGAAGATAACAAGGAGCTGCTAATGTCGCAAATGAATTTCGAAAAGAAATTTGGGCAGTCATCAATTTTTGTTACCTCGACTTTGATGGAAGAAGGTGGTGTTCCACCCTCCTCGGGTCCAGCGGCCCTACTTAAGGAAGCAATTCATGTTATCAGTTGCGGTTATGAAGACAAAACCGAATGGGGTACAGAGTTGGGCTGGATTTATGGGTCGATCACAGAAGATATTCTAACAGGTTTCAAGATGCATTGTCGTGGCTGGAGATCTATATACTGCATGCCAAAGAGACCTGCATTTAAGGGTACAGCTCCCATTAACTTGTCTGACCGGCTGAACCAGGTGCTTCGTTGGGCACTCGGGTCTATTGAAATCTTTTTCAGCAATCACTGCCCTGTTTGGTATGGTTATAAGGGTGGGAAGCTAAAGTGGCTAGAGAGATTTGCATACGTCAACACAACTGTCTACCCCTTCACTTCAATACCACTTCTCGCTTACTGTACCCTCCCTGCGATCTGCCTGCTCACCGATAAGTTTATCATGCCACCGATAAGCACTTTTGCAAGTCTCTACTTCATTGCCTTGTTTCTTTCCATTTTTGCTACGGGTATTCTAGAGCTTAAATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTATTTCAGCTCATCTATTTGCTGTTGTTCAAGGTCTATTGAAGGTTCTGGCTGGAATTGATACTAGCTTCACAGTTACATCCAAGGCAACAGATGACGAAGATTTTGGAGAATTATATGCCTTTAAGTGGACCACTCTACTAATCCCTCCAACAACTATTTTGATCATCAACCTTGTTGGGGTTGTTGCAGGCATCTCAGATGCCATAAACAATGGCTATCAATCATGGGGACCCCTATTTGGGAAGCTTTTCTTTGCCTTCTGGGTGATTGTCCATCTCTACCCATTCCTTAAGGGTCTGATGGGCCGACAAAACCGCACACCGACTATAGTCGTCATATGGTCCGTGCTGTTGGCTTCAATCTTCTCCTTGCTTTGGGTTCGAATTGATCCATTTGTGATGAAAACAAAGGGACCAGATACCAAGCAATGTGGACTAAATTGCTGA | 4698 | 44.85 | MDVCESARAFRKHTVAAAPRQPLVPAEKNNEVITRFPSCSKKMSSSPSSLSGPRRCPSPSITRTVHTSSQLVLKRAQSAERKRPSTPPSPSPAAPIDGSPADLQLLSKRMISGRPDSLWPSTMRSLSVSFQSDTISIPVSKKGKPVLSSPSDRTLRPSSNFPSKQAETQTVARKSAPERKRSPLRGKNGHDQSENFKPVAGSRTQFIDQHRWPSRIGAKASSNSLNCCVDLADKRVPILNKPLRGSALSCTVETVSKPLQKSSSGVMRLSYVDGRSRKEFEANSANDNSMQESAANKVVSSSLSDIKITTNRVVRYDSPTLVPRPSSVTRRASPSRMTPSTPTPRAISSSRIRPSNATQPNVSTSVLSFIADFKKGKKATSYIEGAHQLRLLYNRHLQWRCANARAEAVLRNQEVAAEMSYLNEWAVLERSHNRSLSGVIDDLESSTLRVPLTGGAKVDAGSLNDAIFSAVEVMQAMGSSICSMLPRVEIMQTLVIELAILAAQEKAMLDECIALLASTAALQAKQANNKAHFVTSLKDESFFQISLPPHQINTVFDINVNAILNVMAEAKCRGEELCVEPVGGAMEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDEVGLTVDGDLFVACNECGFPVCRPCYDHMAEAMLHGKMSYGRGPNDDENAQYGRTEPENVELPLSSQGYGDQISSSSLHKRVHPFPASEPGSGRWDEKREEGWKDRMDDWKLQQGNLGPEPDDANDPDMAMIDAARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNLLAPVDIFVSTVDPMKEPPLVTANTILSILAMDYPVDKVSCYVSDDGASMLTFEAMSETAEFARKWVPFCKKFSIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINAQVAKAIKVPTEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAAREAMCFLMDPQVGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVCCDCCPCFGRRKKLKSSKSGVDGDAAAMEDNKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSGPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSNHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCTLPAICLLTDKFIMPPISTFASLYFIALFLSIFATGILELKWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKVLAGIDTSFTVTSKATDDEDFGELYAFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKQCGLNC | 1565 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2188522 | 2198452 | + | CmoCh11G004480.1 | Cmo11g00448 | 391067 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00448 | 1565 | MobiDBLite | consensus disorder prediction | 140 | 200 | - | - | |
Cmo11g00448 | 1565 | MobiDBLite | consensus disorder prediction | 35 | 75 | - | - | |
Cmo11g00448 | 1565 | MobiDBLite | consensus disorder prediction | 173 | 192 | - | - | |
Cmo11g00448 | 1565 | Pfam | Cellulose synthase | 860 | 1559 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Cmo11g00448 | 1565 | Pfam | QWRF family | 257 | 419 | IPR007573 | - | |
Cmo11g00448 | 1565 | Pfam | QWRF family | 418 | 510 | IPR007573 | - | |
Cmo11g00448 | 1565 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 605 | 663 | IPR013083 | - | |
Cmo11g00448 | 1565 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 710 | 1565 | - | - | |
Cmo11g00448 | 1565 | MobiDBLite | consensus disorder prediction | 151 | 172 | - | - | |
Cmo11g00448 | 1565 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] | 586 | 655 | - | - | |
Cmo11g00448 | 1565 | MobiDBLite | consensus disorder prediction | 35 | 100 | - | - | |
Cmo11g00448 | 1565 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 873 | 1389 | IPR029044 | - | |
Cmo11g00448 | 1565 | Pfam | Zinc-binding RING-finger | 612 | 655 | IPR027934 | - | |
Cmo11g00448 | 1565 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 969 | 1151 | IPR029044 | - | |
Cmo11g00448 | 1565 | SUPERFAMILY | RING/U-box | 606 | 655 | - | - | |
Cmo11g00448 | 1565 | MobiDBLite | consensus disorder prediction | 700 | 727 | - | - | |
Cmo11g00448 | 1565 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] | 710 | 1565 | - | - | |
Cmo11g00448 | 1565 | MobiDBLite | consensus disorder prediction | 319 | 359 | - | - | |
Cmo11g00448 | 1565 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 586 | 655 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00448 | Cmo-Chr11:2188522 | Cmo17g01333 | Cmo-Chr17:10447348 | 0 | dispersed | |
Cmo18g00405 | Cmo-Chr18:2623298 | Cmo11g00448 | Cmo-Chr11:2188522 | 0 | dispersed | |
Cmo19g00571 | Cmo-Chr19:6527967 | Cmo11g00448 | Cmo-Chr11:2188522 | 4.29E-08 | dispersed | |
Cmo20g00637 | Cmo-Chr20:3127970 | Cmo11g00448 | Cmo-Chr11:2188522 | 4.07E-130 | dispersed | |
Cmo20g00943 | Cmo-Chr20:4924526 | Cmo11g00448 | Cmo-Chr11:2188522 | 0 | dispersed | |
Cmo10g00491 | Cmo-Chr10:2193786 | Cmo11g00448 | Cmo-Chr11:2188522 | 0 | transposed | |
Cmo10g00489 | Cmo-Chr10:2185055 | Cmo11g00448 | Cmo-Chr11:2188522 | 0 | wgd | |
Cmo11g00448 | Cmo-Chr11:2188522 | Cmo12g00853 | Cmo-Chr12:7788536 | 4.31E-132 | wgd | |
Cmo11g00448 | Cmo-Chr11:2188522 | Cmo12g00853 | Cmo-Chr12:7788536 | 4.31E-132 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00448 | K10999 | - | csv:101214842 | 1945.24 |