Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00451 ATGTCTTCTGTTTATCAGAGCTTTCTCTCTCGTCATTACAAGAGAGAGAAACGGGTAGAAACCAAAACCTTTATCACTTCTCTTCAAATCCTATCCAATTCAGCGCTCACCGCCGCTGAATCTTCTTCTTCCCAGCAAGCTGATCGGACGGTTCTAAGCTTGAGACCTGGTGGCGGTCGACCTAGACTCCTTGGTCCTCGCTTTGAGCATTCATCCTCCTCTTCCTCATCGTCTTCATCTTCTTTTACCTTCGGTTCATTTTCCTCTGATCTTTCCACCCTCCCGCCCCATGGCGGGCCTTCCGCTTCATTGTCTGTGAATGCTGAAGATTCACGGTTTGAGGGTCGTGAGCGTGTTCGATATACCCGAGATCAGCTTTTGCGGCTTCGAGTGCAGCTTCGAGAGGCTGTGGAAGTTCCAGATGATATACTAATACTTAAACGGGATCTTGAAGTGGAAATTTTTGGCGAGGAACAAAGTTGGAGTCGTGGAGAGAGCAATCAACCTAATCAGTCTCAGAATCGCTATTCTGAGCCAGACAGTCGTGACTGGCGTGGCCGTTCTGCCCAATTCTCTGCTTCTGGAGAGGAGAGGTCCAGGGAAACAAATCGAGATAGAGATGTTGGTGGTCATTTTGACTCTAGACAGCAAGACGCAAACCAATTCAATCGTCAAGAGCATTGGACCAGGACCACTTCTAACCAAGGGGGAGGACTTCCCGCTTTAATCAAAGCTGAGGTTCCATGGTCAGCTAGGAGAGGAAATCTTTCTGAAAAGGATCGTGTCTTGAAGACTGTAAAGGGGATATTGAACAAGCTAACACCAGAAAAGTTCGATCTCCTCAAGGGTCAGCTAATGGACTCCGGAATCACCTCCGCTGATATTTTGAAGGATGTCATTTCACTGATTTTTGATAAGGCTGTTCTCGAGCCCACATTTTGCCCCATGTATGCCCAATTGTGTTCTGATCTGAATCAGAAGCTACCTCAATTTCCCTCCGATGAACCTGGTGGAAGGGAAATTACTTTTAAACGAGTCCTCTTAAATATCTGTCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTAGGCAGATGATTGCCCCTGAGCAAGAGAGCGAGCGCAGAGATAAAGAAAGACTGATCAAACTTCGTACTCTTGGAAATATTCGATTAATTGGAGAGCTTCTGAAGCAAAAGATGGTGCCTGAGAAGATTGTCCACCACATCGTGCAGGAACTTTTAGGACCAGATAACAAAATCTGTCCTGCTGAAGAAAATGTGGAGGCCATCTGTCAGTTCTTTAACACCATAGGTAAGCAGCTAGACGAGAATACAAAATCGCGGCGTATAAATGACATGTACTTTGGCCGATTGAAAGAATTGACTACACTCCCTCAGTTGGCTCCACGTTTGAAGTTCATGGTCCGCGATGTTCTTGATTTGCGAGCTAACAATTGGGTACCTAGGCGTGAAGAGGTTAAAGCCAAAACTATTACTGAAATACATTCAGAGGCAGAAAAAAATCTGGGACTACGTCCTGGTACTACTATCAATATCAGAAATAGTCGTGGTGTTGTGTCTGGCTCTCCTGGGAACACCAGCCCTGGGGGCTTTCCTATCAATCGACCTGGTTTGGGGGGTATGATGCCGGGCATGCCAGGAACCAGGAAGATGCCTGGTATGCCAGGAATGGATAATGACAATTGGGAGGTTCCTAGGGCCCGTACTGTACCTAGGGGGGCAAACGGATCTGGTATGCAGCCTTCTGGACGTGGCCAGACACAGTTGATTGGCAAAGCATCAACCTTGAATGCGAGGCTACTACCCCAGAGTTCTGGTGGCCTCATTAGTAACAAGACTAGTGCTCAATTGCAGGGTGCAGGAGCATCTACTACTCGTCCTATTAACTTCGGTCAAGGGTTGGGTCATAAACCTATTACGGCAGCAATGGTCCTTCCACCTGCTGAGAGACCACAGGTTCCAGCTGCATCTTTAAAACAAGTTGATCTCAAAAAGAAAACTCTCTCTCTTCTTGAAGAATATTTTAGTATCCGGATTTTGGATGAGGCTTTACAGTGCGTGGAAGAACTCATGTCACCAGCTTACCATCCTGAAGTTGTAAAAGAAGCCATTTCTTTAGCCCTAGAGAAAAGCCCACCCTGTGTTGAAGCAGTCGTAAAGTTTCTGGCCTATTTACTCTCCAGGAAGGTTTTTACTGCTGGAGACATTGAGACTGGATGTTTGCTATATGCTTCTGTGCTCGACGACGCAGGCATTGATTTACCAAAAGCCCCAATCAATTTCGGAGTGATAATTGGGAAACTTGTTATATCTGGTAGTTTGGATTTTCAGGTGGTGAAGGAGCTCCTTAAGAAGGTGGAAGATGACAGGTTCAGGAAAGACATATTTGATGCTGTCTTGCAGACGCTAAGTTCTGATGTGTCTGGACAAGGATTACTGGATTCATTGGCATCCTATATCGAGGCCTGTCGAAGTCTAGCATGTTAA 2517 46.21 MSSVYQSFLSRHYKREKRVETKTFITSLQILSNSALTAAESSSSQQADRTVLSLRPGGGRPRLLGPRFEHSSSSSSSSSSSFTFGSFSSDLSTLPPHGGPSASLSVNAEDSRFEGRERVRYTRDQLLRLRVQLREAVEVPDDILILKRDLEVEIFGEEQSWSRGESNQPNQSQNRYSEPDSRDWRGRSAQFSASGEERSRETNRDRDVGGHFDSRQQDANQFNRQEHWTRTTSNQGGGLPALIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLMDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMIAPEQESERRDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNKICPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLKELTTLPQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGTTINIRNSRGVVSGSPGNTSPGGFPINRPGLGGMMPGMPGTRKMPGMPGMDNDNWEVPRARTVPRGANGSGMQPSGRGQTQLIGKASTLNARLLPQSSGGLISNKTSAQLQGAGASTTRPINFGQGLGHKPITAAMVLPPAERPQVPAASLKQVDLKKKTLSLLEEYFSIRILDEALQCVEELMSPAYHPEVVKEAISLALEKSPPCVEAVVKFLAYLLSRKVFTAGDIETGCLLYASVLDDAGIDLPKAPINFGVIIGKLVISGSLDFQVVKELLKKVEDDRFRKDIFDAVLQTLSSDVSGQGLLDSLASYIEACRSLAC 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2202868 2209926 + CmoCh11G004510.1 Cmo11g00451 391070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00451 838 MobiDBLite consensus disorder prediction 38 80 - -
Cmo11g00451 838 Gene3D - 666 828 - -
Cmo11g00451 838 SUPERFAMILY ARM repeat 256 491 IPR016024 -
Cmo11g00451 838 ProSiteProfiles MI domain profile. 672 794 IPR003891 -
Cmo11g00451 838 MobiDBLite consensus disorder prediction 214 238 - -
Cmo11g00451 838 MobiDBLite consensus disorder prediction 197 213 - -
Cmo11g00451 838 Pfam MIF4G domain 263 488 IPR003890 GO:0003723|GO:0005515
Cmo11g00451 838 Gene3D - 254 489 - -
Cmo11g00451 838 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 46 836 - -
Cmo11g00451 838 MobiDBLite consensus disorder prediction 516 546 - -
Cmo11g00451 838 Pfam MA3 domain 673 785 IPR003891 -
Cmo11g00451 838 MobiDBLite consensus disorder prediction 160 177 - -
Cmo11g00451 838 SUPERFAMILY ARM repeat 668 826 IPR016024 -
Cmo11g00451 838 SMART ma3_7 673 785 IPR003891 -
Cmo11g00451 838 MobiDBLite consensus disorder prediction 159 240 - -
Cmo11g00451 838 MobiDBLite consensus disorder prediction 517 539 - -
Cmo11g00451 838 SMART if4_15 263 488 IPR003890 GO:0003723|GO:0005515
Cmo11g00451 838 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 46 836 IPR045208 GO:0003743
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00493 Cmo11g00451 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00451 Cmo-Chr11:2202868 Cmo17g00073 Cmo-Chr17:376950 6.78E-60 dispersed
Cmo10g00493 Cmo-Chr10:2201428 Cmo11g00451 Cmo-Chr11:2202868 0 wgd
Cmo11g00451 Cmo-Chr11:2202868 Cmo09g00404 Cmo-Chr9:1776429 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00451 K03260 - csv:101207520 1277.31