Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00451 | ATGTCTTCTGTTTATCAGAGCTTTCTCTCTCGTCATTACAAGAGAGAGAAACGGGTAGAAACCAAAACCTTTATCACTTCTCTTCAAATCCTATCCAATTCAGCGCTCACCGCCGCTGAATCTTCTTCTTCCCAGCAAGCTGATCGGACGGTTCTAAGCTTGAGACCTGGTGGCGGTCGACCTAGACTCCTTGGTCCTCGCTTTGAGCATTCATCCTCCTCTTCCTCATCGTCTTCATCTTCTTTTACCTTCGGTTCATTTTCCTCTGATCTTTCCACCCTCCCGCCCCATGGCGGGCCTTCCGCTTCATTGTCTGTGAATGCTGAAGATTCACGGTTTGAGGGTCGTGAGCGTGTTCGATATACCCGAGATCAGCTTTTGCGGCTTCGAGTGCAGCTTCGAGAGGCTGTGGAAGTTCCAGATGATATACTAATACTTAAACGGGATCTTGAAGTGGAAATTTTTGGCGAGGAACAAAGTTGGAGTCGTGGAGAGAGCAATCAACCTAATCAGTCTCAGAATCGCTATTCTGAGCCAGACAGTCGTGACTGGCGTGGCCGTTCTGCCCAATTCTCTGCTTCTGGAGAGGAGAGGTCCAGGGAAACAAATCGAGATAGAGATGTTGGTGGTCATTTTGACTCTAGACAGCAAGACGCAAACCAATTCAATCGTCAAGAGCATTGGACCAGGACCACTTCTAACCAAGGGGGAGGACTTCCCGCTTTAATCAAAGCTGAGGTTCCATGGTCAGCTAGGAGAGGAAATCTTTCTGAAAAGGATCGTGTCTTGAAGACTGTAAAGGGGATATTGAACAAGCTAACACCAGAAAAGTTCGATCTCCTCAAGGGTCAGCTAATGGACTCCGGAATCACCTCCGCTGATATTTTGAAGGATGTCATTTCACTGATTTTTGATAAGGCTGTTCTCGAGCCCACATTTTGCCCCATGTATGCCCAATTGTGTTCTGATCTGAATCAGAAGCTACCTCAATTTCCCTCCGATGAACCTGGTGGAAGGGAAATTACTTTTAAACGAGTCCTCTTAAATATCTGTCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTAGGCAGATGATTGCCCCTGAGCAAGAGAGCGAGCGCAGAGATAAAGAAAGACTGATCAAACTTCGTACTCTTGGAAATATTCGATTAATTGGAGAGCTTCTGAAGCAAAAGATGGTGCCTGAGAAGATTGTCCACCACATCGTGCAGGAACTTTTAGGACCAGATAACAAAATCTGTCCTGCTGAAGAAAATGTGGAGGCCATCTGTCAGTTCTTTAACACCATAGGTAAGCAGCTAGACGAGAATACAAAATCGCGGCGTATAAATGACATGTACTTTGGCCGATTGAAAGAATTGACTACACTCCCTCAGTTGGCTCCACGTTTGAAGTTCATGGTCCGCGATGTTCTTGATTTGCGAGCTAACAATTGGGTACCTAGGCGTGAAGAGGTTAAAGCCAAAACTATTACTGAAATACATTCAGAGGCAGAAAAAAATCTGGGACTACGTCCTGGTACTACTATCAATATCAGAAATAGTCGTGGTGTTGTGTCTGGCTCTCCTGGGAACACCAGCCCTGGGGGCTTTCCTATCAATCGACCTGGTTTGGGGGGTATGATGCCGGGCATGCCAGGAACCAGGAAGATGCCTGGTATGCCAGGAATGGATAATGACAATTGGGAGGTTCCTAGGGCCCGTACTGTACCTAGGGGGGCAAACGGATCTGGTATGCAGCCTTCTGGACGTGGCCAGACACAGTTGATTGGCAAAGCATCAACCTTGAATGCGAGGCTACTACCCCAGAGTTCTGGTGGCCTCATTAGTAACAAGACTAGTGCTCAATTGCAGGGTGCAGGAGCATCTACTACTCGTCCTATTAACTTCGGTCAAGGGTTGGGTCATAAACCTATTACGGCAGCAATGGTCCTTCCACCTGCTGAGAGACCACAGGTTCCAGCTGCATCTTTAAAACAAGTTGATCTCAAAAAGAAAACTCTCTCTCTTCTTGAAGAATATTTTAGTATCCGGATTTTGGATGAGGCTTTACAGTGCGTGGAAGAACTCATGTCACCAGCTTACCATCCTGAAGTTGTAAAAGAAGCCATTTCTTTAGCCCTAGAGAAAAGCCCACCCTGTGTTGAAGCAGTCGTAAAGTTTCTGGCCTATTTACTCTCCAGGAAGGTTTTTACTGCTGGAGACATTGAGACTGGATGTTTGCTATATGCTTCTGTGCTCGACGACGCAGGCATTGATTTACCAAAAGCCCCAATCAATTTCGGAGTGATAATTGGGAAACTTGTTATATCTGGTAGTTTGGATTTTCAGGTGGTGAAGGAGCTCCTTAAGAAGGTGGAAGATGACAGGTTCAGGAAAGACATATTTGATGCTGTCTTGCAGACGCTAAGTTCTGATGTGTCTGGACAAGGATTACTGGATTCATTGGCATCCTATATCGAGGCCTGTCGAAGTCTAGCATGTTAA | 2517 | 46.21 | MSSVYQSFLSRHYKREKRVETKTFITSLQILSNSALTAAESSSSQQADRTVLSLRPGGGRPRLLGPRFEHSSSSSSSSSSSFTFGSFSSDLSTLPPHGGPSASLSVNAEDSRFEGRERVRYTRDQLLRLRVQLREAVEVPDDILILKRDLEVEIFGEEQSWSRGESNQPNQSQNRYSEPDSRDWRGRSAQFSASGEERSRETNRDRDVGGHFDSRQQDANQFNRQEHWTRTTSNQGGGLPALIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLMDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMIAPEQESERRDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNKICPAEENVEAICQFFNTIGKQLDENTKSRRINDMYFGRLKELTTLPQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGTTINIRNSRGVVSGSPGNTSPGGFPINRPGLGGMMPGMPGTRKMPGMPGMDNDNWEVPRARTVPRGANGSGMQPSGRGQTQLIGKASTLNARLLPQSSGGLISNKTSAQLQGAGASTTRPINFGQGLGHKPITAAMVLPPAERPQVPAASLKQVDLKKKTLSLLEEYFSIRILDEALQCVEELMSPAYHPEVVKEAISLALEKSPPCVEAVVKFLAYLLSRKVFTAGDIETGCLLYASVLDDAGIDLPKAPINFGVIIGKLVISGSLDFQVVKELLKKVEDDRFRKDIFDAVLQTLSSDVSGQGLLDSLASYIEACRSLAC | 838 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2202868 | 2209926 | + | CmoCh11G004510.1 | Cmo11g00451 | 391070 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00451 | 838 | MobiDBLite | consensus disorder prediction | 38 | 80 | - | - | |
Cmo11g00451 | 838 | Gene3D | - | 666 | 828 | - | - | |
Cmo11g00451 | 838 | SUPERFAMILY | ARM repeat | 256 | 491 | IPR016024 | - | |
Cmo11g00451 | 838 | ProSiteProfiles | MI domain profile. | 672 | 794 | IPR003891 | - | |
Cmo11g00451 | 838 | MobiDBLite | consensus disorder prediction | 214 | 238 | - | - | |
Cmo11g00451 | 838 | MobiDBLite | consensus disorder prediction | 197 | 213 | - | - | |
Cmo11g00451 | 838 | Pfam | MIF4G domain | 263 | 488 | IPR003890 | GO:0003723|GO:0005515 | |
Cmo11g00451 | 838 | Gene3D | - | 254 | 489 | - | - | |
Cmo11g00451 | 838 | PANTHER | MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 | 46 | 836 | - | - | |
Cmo11g00451 | 838 | MobiDBLite | consensus disorder prediction | 516 | 546 | - | - | |
Cmo11g00451 | 838 | Pfam | MA3 domain | 673 | 785 | IPR003891 | - | |
Cmo11g00451 | 838 | MobiDBLite | consensus disorder prediction | 160 | 177 | - | - | |
Cmo11g00451 | 838 | SUPERFAMILY | ARM repeat | 668 | 826 | IPR016024 | - | |
Cmo11g00451 | 838 | SMART | ma3_7 | 673 | 785 | IPR003891 | - | |
Cmo11g00451 | 838 | MobiDBLite | consensus disorder prediction | 159 | 240 | - | - | |
Cmo11g00451 | 838 | MobiDBLite | consensus disorder prediction | 517 | 539 | - | - | |
Cmo11g00451 | 838 | SMART | if4_15 | 263 | 488 | IPR003890 | GO:0003723|GO:0005515 | |
Cmo11g00451 | 838 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 46 | 836 | IPR045208 | GO:0003743 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00493 | Cmo11g00451 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00451 | Cmo-Chr11:2202868 | Cmo17g00073 | Cmo-Chr17:376950 | 6.78E-60 | dispersed | |
Cmo10g00493 | Cmo-Chr10:2201428 | Cmo11g00451 | Cmo-Chr11:2202868 | 0 | wgd | |
Cmo11g00451 | Cmo-Chr11:2202868 | Cmo09g00404 | Cmo-Chr9:1776429 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00451 | K03260 | - | csv:101207520 | 1277.31 |