Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00460 ATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCCGGAGCGTCCAAGACTTTCCCTCAGCAAGCTGGTACCATTCGCAAAAATGGCTACATCGTAATCAAGAACAGGCCCTGCAAGGTTGTTGAAGTTTCCACTTCAAAAACTGGAAAGCATGGACATGCGAAGTGTCACTTTGTGGCAATTGACATATTCAATGGAAAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGTTCCCCATGTTAATCGTACTGATTATCAGCTGATTGATATATCTGAGGATGGTTTTGTCAGTCTGCTTACTGAAAATGGAAACACTAAGGATGACCTGAGGCTTCCGACCGATGATAATCTGCTTACGCAGCTTAAAGATGGGTTCGCTGAAGGAAAGGATCTTGTTCTAACTGTTATGTCTGCAATGGGAGAGGAGCAGATCTGTGCTCTCAAGGACATCGGTCCTAAAGGCTAA 483 45.13 MSDEEHHFDSKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKG 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2245677 2248890 - CmoCh11G004600.1 Cmo11g00460 391079

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00460 160 SUPERFAMILY Translation proteins SH3-like domain 15 93 IPR008991 -
Cmo11g00460 160 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 156 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Cmo11g00460 160 SUPERFAMILY Nucleic acid-binding proteins 86 156 IPR012340 -
Cmo11g00460 160 CDD S1_eIF5A 86 156 - -
Cmo11g00460 160 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Cmo11g00460 160 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Cmo11g00460 160 SMART eIF_5a_2 85 154 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Cmo11g00460 160 TIGRFAM eIF_5A: translation elongation factor IF5A 18 153 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Cmo11g00460 160 Gene3D - 1 85 IPR014722 -
Cmo11g00460 160 PANTHER BNAA07G09420D PROTEIN 1 156 - -
Cmo11g00460 160 Gene3D - 86 159 IPR012340 -
Cmo11g00460 160 MobiDBLite consensus disorder prediction 1 21 - -
Cmo11g00460 160 PIRSF Transl_init_eIF5A 1 157 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00460 K03263 EIF5A; translation initiation factor 5A - csv:101210204 325.479
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00460 Cmo-Chr11:2245677 Cmo18g01144 Cmo-Chr18:11697801 2.49E-109 dispersed
Cmo10g00501 Cmo-Chr10:2234753 Cmo11g00460 Cmo-Chr11:2245677 1.49E-77 wgd
Cmo11g00460 Cmo-Chr11:2245677 Cmo09g00416 Cmo-Chr9:1817752 1.29E-105 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo17g00105 . 1 446 Eukaryotic Initiation Factors Gene Family AT5G60390 96.4 1.4e-253 872.5
Cmo08g00989 . 1 446 Eukaryotic Initiation Factors Gene Family AT5G60390 96.4 1.8e-253 872.1
Cmo15g00448 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 7.5e-252 866.7
Cmo15g00449 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 7.5e-252 866.7
Cmo02g00876 . 125 573 Eukaryotic Initiation Factors Gene Family AT5G60390 94.7 1.7e-251 865.5
Cmo20g00507 . 599 1037 Eukaryotic Initiation Factors Gene Family AT5G60390 95.2 1.7e-248 855.5
Cmo17g00105 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07920 96.4 1.4e-253 872.5
Cmo08g00989 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07920 96.4 1.8e-253 872.1
Cmo15g00448 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 7.5e-252 866.7
Cmo15g00449 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 7.5e-252 866.7
Cmo02g00876 . 125 573 Eukaryotic Initiation Factors Gene Family AT1G07920 94.7 1.7e-251 865.5
Cmo20g00507 . 599 1037 Eukaryotic Initiation Factors Gene Family AT1G07920 95.2 1.7e-248 855.5
Cmo17g00105 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07930 80.5 1.7e-201 699.1
Cmo08g00989 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07930 80.5 2.2e-201 698.7
Cmo02g00876 . 125 573 Eukaryotic Initiation Factors Gene Family AT1G07930 79.7 3.8e-201 698.0
Cmo15g00448 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 7.2e-200 693.7
Cmo15g00449 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.1 1.6e-199 692.6
Cmo20g00507 . 599 1037 Eukaryotic Initiation Factors Gene Family AT1G07930 79.7 1.5e-197 686.0
Cmo17g00105 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07940 96.4 1.4e-253 872.5
Cmo08g00989 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07940 96.4 1.8e-253 872.1
Cmo15g00448 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 7.5e-252 866.7
Cmo15g00449 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 7.5e-252 866.7
Cmo02g00876 . 125 573 Eukaryotic Initiation Factors Gene Family AT1G07940 94.7 1.7e-251 865.5
Cmo20g00507 . 599 1037 Eukaryotic Initiation Factors Gene Family AT1G07940 95.2 1.7e-248 855.5
Cmo05g01199 . 1 720 Eukaryotic Initiation Factors Gene Family AT3G02270 56.4 9.1e-185 644.4
Cmo19g00956 CST 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 88.5 3.7e-54 208.0
Cmo19g00955 . 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 88.5 6.2e-54 207.2
Cmo11g01909 CST 1 111 Eukaryotic Initiation Factors Gene Family AT4G27130 88.3 4.0e-53 204.5
Cmo09g00953 CST 261 371 Eukaryotic Initiation Factors Gene Family AT4G27130 80.4 1.1e-45 179.9
Cmo01g01180 CST 34 145 Eukaryotic Initiation Factors Gene Family AT4G27130 77.0 2.4e-45 178.7
Cmo19g00956 CST 1 113 Eukaryotic Initiation Factors Gene Family AT5G54760 87.6 8.2e-54 206.8
Cmo19g00955 . 1 113 Eukaryotic Initiation Factors Gene Family AT5G54760 87.6 1.4e-53 206.1
Cmo11g01909 CST 1 111 Eukaryotic Initiation Factors Gene Family AT5G54760 87.4 9.0e-53 203.4
Cmo09g00953 CST 261 371 Eukaryotic Initiation Factors Gene Family AT5G54760 80.4 1.1e-45 179.9
Cmo01g01180 CST 34 145 Eukaryotic Initiation Factors Gene Family AT5G54760 77.0 2.4e-45 178.7
Cmo01g01180 CST 34 145 Eukaryotic Initiation Factors Gene Family AT5G54940 85.7 8.9e-53 203.4
Cmo09g00953 CST 261 371 Eukaryotic Initiation Factors Gene Family AT5G54940 83.8 1.4e-50 196.1
Cmo19g00956 CST 1 113 Eukaryotic Initiation Factors Gene Family AT5G54940 73.5 2.9e-43 171.8
Cmo19g00955 . 1 113 Eukaryotic Initiation Factors Gene Family AT5G54940 72.6 8.4e-43 170.2
Cmo11g01909 CST 1 111 Eukaryotic Initiation Factors Gene Family AT5G54940 72.1 1.3e-40 162.9
Cmo19g00956 CST 1 113 Eukaryotic Initiation Factors Gene Family AT1G54290 88.5 9.6e-55 209.9
Cmo19g00955 . 1 113 Eukaryotic Initiation Factors Gene Family AT1G54290 88.5 1.6e-54 209.1
Cmo11g01909 CST 1 111 Eukaryotic Initiation Factors Gene Family AT1G54290 87.4 1.2e-52 203.0
Cmo01g01180 CST 34 145 Eukaryotic Initiation Factors Gene Family AT1G54290 76.1 1.4e-45 179.5
Cmo09g00953 CST 261 371 Eukaryotic Initiation Factors Gene Family AT1G54290 78.6 2.4e-45 178.7
Cmo11g01868 . 1 128 Eukaryotic Initiation Factors Gene Family AT5G35680 93.8 7.2e-66 247.3
Cmo20g00665 . 1 128 Eukaryotic Initiation Factors Gene Family AT5G35680 93.0 3.6e-65 245.0
Cmo20g00664 . 1 128 Eukaryotic Initiation Factors Gene Family AT5G35680 93.0 3.6e-65 245.0
Cmo14g01510 . 1 128 Eukaryotic Initiation Factors Gene Family AT5G35680 92.2 8.0e-65 243.8
Cmo06g01652 . 8 135 Eukaryotic Initiation Factors Gene Family AT5G35680 92.2 1.0e-64 243.4
Cmo11g01868 . 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 89.7 2.7e-70 261.9
Cmo20g00665 . 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 88.3 1.0e-69 260.0
Cmo20g00664 . 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 88.3 1.0e-69 260.0
Cmo14g01510 . 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 88.3 1.4e-69 259.6
Cmo06g01652 . 8 152 Eukaryotic Initiation Factors Gene Family AT2G04520 88.3 1.8e-69 259.2
Cmo04g01170 CST 397 621 Eukaryotic Initiation Factors Gene Family AT2G40290 89.3 3.2e-116 415.2
Cmo04g00133 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 88.4 1.6e-115 412.9
Cmo04g01170 CST 397 740 Eukaryotic Initiation Factors Gene Family AT5G05470 82.0 2.8e-158 555.4
Cmo04g00133 . 1 344 Eukaryotic Initiation Factors Gene Family AT5G05470 80.9 1.8e-157 552.7
Cmo13g00002 . 77 342 Eukaryotic Initiation Factors Gene Family AT5G20920 72.0 1.9e-101 366.3
Cmo01g00767 . 1 169 Eukaryotic Initiation Factors Gene Family AT5G20920 67.8 1.9e-53 206.8
Cmo13g00002 . 191 331 Eukaryotic Initiation Factors Gene Family AT5G01940 56.3 2.1e-38 156.8
Cmo13g00002 . 195 338 Eukaryotic Initiation Factors Gene Family AT3G07920 70.9 7.4e-56 214.2
Cmo04g00010 . 1 464 Eukaryotic Initiation Factors Gene Family AT1G04170 91.8 4.0e-248 854.4
Cmo04g01051 . 1 464 Eukaryotic Initiation Factors Gene Family AT1G04170 91.4 1.7e-246 849.0
Cmo04g00010 . 4 464 Eukaryotic Initiation Factors Gene Family AT4G18330 83.3 4.2e-221 764.6
Cmo04g01051 . 4 464 Eukaryotic Initiation Factors Gene Family AT4G18330 82.9 2.3e-219 758.8
Cmo04g00010 . 93 463 Eukaryotic Initiation Factors Gene Family AT2G18720 75.7 2.5e-163 572.4
Cmo04g01051 . 91 463 Eukaryotic Initiation Factors Gene Family AT2G18720 75.1 3.2e-163 572.0
Cmo08g00800 . 1 395 Eukaryotic Initiation Factors Gene Family AT1G53880 77.8 4.9e-167 584.7
Cmo08g00800 . 1 327 Eukaryotic Initiation Factors Gene Family AT1G72340 75.5 3.6e-131 465.3
Cmo11g00753 . 82 402 Eukaryotic Initiation Factors Gene Family AT2G05830 74.8 1.2e-134 476.9
Cmo04g02312 . 98 506 Eukaryotic Initiation Factors Gene Family AT3G07300 80.5 2.3e-175 612.5
Cmo15g00850 . 66 464 Eukaryotic Initiation Factors Gene Family AT3G07300 80.0 5.0e-170 594.7
Cmo11g00254 . 1 647 Eukaryotic Initiation Factors Gene Family AT5G38640 60.5 8.0e-199 691.0
Cmo10g00273 CST 1 731 Eukaryotic Initiation Factors Gene Family AT5G38640 52.2 1.2e-175 614.0
Cmo11g00252 CST 33 350 Eukaryotic Initiation Factors Gene Family AT5G38640 78.6 2.4e-142 503.4
Cmo11g00254 . 324 647 Eukaryotic Initiation Factors Gene Family AT2G44070 75.1 1.5e-140 496.5
Cmo11g00252 CST 33 350 Eukaryotic Initiation Factors Gene Family AT2G44070 74.3 4.7e-134 474.9
Cmo10g00273 CST 400 731 Eukaryotic Initiation Factors Gene Family AT2G44070 69.1 3.3e-127 452.2
Cmo11g00254 . 1 579 Eukaryotic Initiation Factors Gene Family AT1G48970 58.5 5.0e-169 592.0
Cmo10g00273 CST 1 651 Eukaryotic Initiation Factors Gene Family AT1G48970 50.6 2.9e-153 539.7
Cmo11g00252 CST 22 281 Eukaryotic Initiation Factors Gene Family AT1G48970 71.5 4.3e-104 376.3
Cmo05g01199 . 1 720 Eukaryotic Initiation Factors Gene Family AT2G34970 65.2 8.2e-240 827.4
Cmo12g01115 . 1 911 Eukaryotic Initiation Factors Gene Family AT2G34970 52.2 9.1e-215 744.2
Cmo05g01199 . 1 720 Eukaryotic Initiation Factors Gene Family AT3G02270 56.4 9.1e-185 644.4
Cmo05g01199 . 1 720 Eukaryotic Initiation Factors Gene Family AT4G18300 60.6 1.4e-207 720.3
Cmo13g01159 . 115 1054 Eukaryotic Initiation Factors Gene Family AT1G48410 83.1 0.0e+00 1563.9
Cmo01g00803 . 119 1041 Eukaryotic Initiation Factors Gene Family AT1G48410 82.2 0.0e+00 1518.4
Cmo14g01794 CST 119 984 Eukaryotic Initiation Factors Gene Family AT1G48410 77.6 0.0e+00 1380.5
Cmo06g01375 CST 97 957 Eukaryotic Initiation Factors Gene Family AT1G48410 75.5 0.0e+00 1351.3
Cmo11g00584 . 64 927 Eukaryotic Initiation Factors Gene Family AT1G48410 69.8 0.0e+00 1243.0
Cmo13g00278 . 129 991 Eukaryotic Initiation Factors Gene Family AT1G48410 58.8 7.5e-295 1010.7
Cmo13g00276 . 129 400 Eukaryotic Initiation Factors Gene Family AT1G48410 51.8 2.3e-70 265.0
Cmo14g01794 CST 1 984 Eukaryotic Initiation Factors Gene Family AT5G43810 82.2 0.0e+00 1649.8
Cmo06g01375 CST 48 957 Eukaryotic Initiation Factors Gene Family AT5G43810 84.8 0.0e+00 1602.8
Cmo13g01159 . 181 1054 Eukaryotic Initiation Factors Gene Family AT5G43810 76.6 0.0e+00 1377.8
Cmo01g00803 . 183 1008 Eukaryotic Initiation Factors Gene Family AT5G43810 78.2 0.0e+00 1337.4
Cmo11g00584 . 70 927 Eukaryotic Initiation Factors Gene Family AT5G43810 74.5 0.0e+00 1330.9
Cmo13g00278 . 105 991 Eukaryotic Initiation Factors Gene Family AT5G43810 56.8 1.7e-288 989.6
Cmo11g01303 . 1 956 Eukaryotic Initiation Factors Gene Family AT4G11420 69.8 0.0e+00 1127.1
Cmo10g01231 . 1 951 Eukaryotic Initiation Factors Gene Family AT4G11420 70.2 0.0e+00 1127.1
Cmo09g01150 . 5 714 Eukaryotic Initiation Factors Gene Family AT5G27640 76.1 0.0e+00 1135.2
Cmo11g00028 . 5 712 Eukaryotic Initiation Factors Gene Family AT5G27640 75.7 0.0e+00 1120.1
Cmo09g01150 . 9 714 Eukaryotic Initiation Factors Gene Family AT5G25780 74.4 0.0e+00 1110.1
Cmo11g00028 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G25780 74.0 0.0e+00 1095.5
Cmo16g00421 . 1 936 Eukaryotic Initiation Factors Gene Family AT3G56150 69.3 0.0e+00 1164.8
Cmo04g00573 . 1 832 Eukaryotic Initiation Factors Gene Family AT3G56150 73.0 0.0e+00 1104.4
Cmo16g00421 . 39 848 Eukaryotic Initiation Factors Gene Family AT3G22860 60.3 1.3e-257 886.7
Cmo04g00573 . 3 860 Eukaryotic Initiation Factors Gene Family AT3G22860 57.0 1.1e-248 857.1
Cmo03g01461 . 5 560 Eukaryotic Initiation Factors Gene Family AT4G20980 78.9 9.2e-258 886.7
Cmo07g00050 . 544 1099 Eukaryotic Initiation Factors Gene Family AT4G20980 78.6 7.3e-255 877.1
Cmo03g01461 . 5 549 Eukaryotic Initiation Factors Gene Family AT5G44320 77.5 2.4e-250 862.1
Cmo07g00050 . 544 1102 Eukaryotic Initiation Factors Gene Family AT5G44320 75.5 5.0e-248 854.4
Cmo03g00041 . 3 438 Eukaryotic Initiation Factors Gene Family AT3G57290 86.0 1.1e-223 773.1
Cmo07g01384 . 4 437 Eukaryotic Initiation Factors Gene Family AT3G57290 84.6 1.4e-218 756.1
Cmo04g03037 CCT,CST 2 285 Eukaryotic Initiation Factors Gene Family AT2G39990 75.9 9.9e-128 453.8
Cmo15g00136 CST 2 285 Eukaryotic Initiation Factors Gene Family AT2G39990 76.3 9.9e-128 453.8
Cmo01g00412 . 8 288 Eukaryotic Initiation Factors Gene Family AT3G11400 70.6 1.6e-118 423.3
Cmo14g00819 . 4 288 Eukaryotic Initiation Factors Gene Family AT3G11400 69.4 1.3e-117 420.2
Cmo13g01151 . 8 289 Eukaryotic Initiation Factors Gene Family AT3G11400 69.0 2.8e-115 412.5
Cmo01g00412 . 9 286 Eukaryotic Initiation Factors Gene Family AT5G06000 68.9 1.2e-107 387.1
Cmo14g00819 . 2 286 Eukaryotic Initiation Factors Gene Family AT5G06000 67.4 4.5e-107 385.2
Cmo13g01151 . 9 287 Eukaryotic Initiation Factors Gene Family AT5G06000 67.3 1.5e-105 380.2
Cmo06g01644 . 88 337 Eukaryotic Initiation Factors Gene Family AT1G10840 84.0 1.2e-121 433.3
Cmo14g01516 . 558 807 Eukaryotic Initiation Factors Gene Family AT1G10840 81.6 2.7e-118 422.2
Cmo11g01238 . 1 247 Eukaryotic Initiation Factors Gene Family AT2G46280 66.3 1.7e-91 333.2
Cmo14g00574 . 16 252 Eukaryotic Initiation Factors Gene Family AT2G46280 62.3 4.8e-78 288.5
Cmo11g01238 . 1 326 Eukaryotic Initiation Factors Gene Family AT2G46290 80.8 1.7e-158 556.2
Cmo14g00574 . 16 331 Eukaryotic Initiation Factors Gene Family AT2G46290 78.0 4.8e-145 511.5
Cmo11g00770 CST 1 234 Eukaryotic Initiation Factors Gene Family AT4G33250 75.2 4.8e-98 354.8
Cmo10g00822 CST 1 245 Eukaryotic Initiation Factors Gene Family AT4G33250 70.6 4.2e-94 341.7
Cmo14g01286 CCT,CST 4 395 Eukaryotic Initiation Factors Gene Family AT3G13920 93.4 1.1e-209 726.5
Cmo17g00686 . 150 540 Eukaryotic Initiation Factors Gene Family AT3G13920 93.4 1.5e-209 726.1
Cmo05g00440 . 1 391 Eukaryotic Initiation Factors Gene Family AT3G13920 93.1 7.3e-209 723.8
Cmo01g00057 CCT,CST 1 391 Eukaryotic Initiation Factors Gene Family AT3G13920 92.9 2.1e-208 722.2
Cmo08g00750 CCT 209 641 Eukaryotic Initiation Factors Gene Family AT3G13920 84.3 1.2e-203 706.4
Cmo14g00989 . 38 388 Eukaryotic Initiation Factors Gene Family AT3G13920 67.5 9.1e-135 477.6
Cmo01g00266 . 724 1059 Eukaryotic Initiation Factors Gene Family AT3G13920 68.2 1.5e-129 460.3
Cmo17g00686 . 150 562 Eukaryotic Initiation Factors Gene Family AT1G72730 90.3 1.6e-216 749.2
Cmo14g01286 CCT,CST 5 417 Eukaryotic Initiation Factors Gene Family AT1G72730 89.4 2.3e-215 745.3
Cmo01g00057 CCT,CST 1 413 Eukaryotic Initiation Factors Gene Family AT1G72730 89.4 2.3e-215 745.3
Cmo05g00440 . 1 413 Eukaryotic Initiation Factors Gene Family AT1G72730 89.9 2.3e-215 745.3
Cmo08g00750 CCT 209 663 Eukaryotic Initiation Factors Gene Family AT1G72730 81.4 1.9e-209 725.7
Cmo14g00989 . 38 410 Eukaryotic Initiation Factors Gene Family AT1G72730 64.9 1.2e-139 493.8
Cmo01g00266 . 724 1059 Eukaryotic Initiation Factors Gene Family AT1G72730 67.3 3.1e-127 452.6
Cmo14g00989 . 22 410 Eukaryotic Initiation Factors Gene Family AT3G19760 89.5 2.5e-201 698.7
Cmo01g00266 . 708 1059 Eukaryotic Initiation Factors Gene Family AT3G19760 88.1 4.5e-179 624.8
Cmo17g00686 . 186 562 Eukaryotic Initiation Factors Gene Family AT3G19760 64.2 7.0e-140 494.6
Cmo05g00440 . 37 413 Eukaryotic Initiation Factors Gene Family AT3G19760 64.2 7.0e-140 494.6
Cmo14g01286 CCT,CST 41 417 Eukaryotic Initiation Factors Gene Family AT3G19760 63.9 7.8e-139 491.1
Cmo01g00057 CCT,CST 37 413 Eukaryotic Initiation Factors Gene Family AT3G19760 63.7 1.0e-138 490.7
Cmo08g00750 CCT 245 663 Eukaryotic Initiation Factors Gene Family AT3G19760 57.8 1.7e-133 473.4
Cmo05g00386 CST 36 459 Eukaryotic Initiation Factors Gene Family AT5G11200 86.1 1.1e-224 776.5
Cmo12g00285 CST 1 424 Eukaryotic Initiation Factors Gene Family AT5G11200 86.1 1.4e-224 776.2
Cmo05g00386 CST 119 459 Eukaryotic Initiation Factors Gene Family AT5G11170 95.3 5.8e-188 654.1
Cmo12g00285 CST 84 424 Eukaryotic Initiation Factors Gene Family AT5G11170 95.3 7.6e-188 653.7
Cmo05g00053 . 1 517 Eukaryotic Initiation Factors Gene Family AT3G26400 51.4 1.1e-105 381.3
Cmo12g00028 . 1 515 Eukaryotic Initiation Factors Gene Family AT3G26400 50.2 3.9e-98 356.3
Cmo05g00053 . 1 517 Eukaryotic Initiation Factors Gene Family AT1G13020 52.0 3.1e-114 409.8
Cmo12g00028 . 1 514 Eukaryotic Initiation Factors Gene Family AT1G13020 52.1 2.1e-110 397.1
Cmo20g00764 CCT,CST 2 405 Eukaryotic Initiation Factors Gene Family AT4G38710 51.4 3.0e-70 263.5
Cmo11g01728 CCT 3 390 Eukaryotic Initiation Factors Gene Family AT4G38710 52.3 2.4e-67 253.8
Cmo13g00599 CST 1 234 Eukaryotic Initiation Factors Gene Family AT4G18040 68.5 1.1e-92 337.0
Cmo18g00422 CST 1 219 Eukaryotic Initiation Factors Gene Family AT4G18040 68.3 1.4e-84 310.1
Cmo08g01033 CST 61 232 Eukaryotic Initiation Factors Gene Family AT4G18040 54.7 1.6e-56 216.9
Cmo17g00144 CST 25 201 Eukaryotic Initiation Factors Gene Family AT4G18040 52.2 1.4e-55 213.8
Cmo13g00599 CST 48 234 Eukaryotic Initiation Factors Gene Family AT1G29590 63.6 8.8e-74 274.2
Cmo18g00422 CST 48 219 Eukaryotic Initiation Factors Gene Family AT1G29590 64.0 9.4e-68 254.2
Cmo17g00144 CST 25 205 Eukaryotic Initiation Factors Gene Family AT1G29590 51.4 7.7e-54 208.0
Cmo08g01033 CST 60 223 Eukaryotic Initiation Factors Gene Family AT1G29590 54.3 4.2e-52 202.2
Cmo13g00599 CST 48 234 Eukaryotic Initiation Factors Gene Family AT1G29550 63.1 3.3e-73 272.3
Cmo18g00422 CST 48 219 Eukaryotic Initiation Factors Gene Family AT1G29550 63.4 3.6e-67 252.3
Cmo17g00144 CST 25 205 Eukaryotic Initiation Factors Gene Family AT1G29550 50.3 3.8e-53 205.7
Cmo08g01033 CST 60 223 Eukaryotic Initiation Factors Gene Family AT1G29550 53.7 5.5e-52 201.8
Cmo08g01033 CST 40 230 Eukaryotic Initiation Factors Gene Family AT5G35620 66.0 1.9e-69 259.6
Cmo17g00144 CST 15 196 Eukaryotic Initiation Factors Gene Family AT5G35620 67.7 1.9e-69 259.6
Cmo13g00599 CST 58 224 Eukaryotic Initiation Factors Gene Family AT5G35620 56.4 1.0e-51 200.7
Cmo18g00422 CST 58 219 Eukaryotic Initiation Factors Gene Family AT5G35620 56.9 7.3e-50 194.5
Cmo14g01118 . 6 181 Eukaryotic Initiation Factors Gene Family AT5G18110 86.9 4.3e-91 331.6
Cmo10g00493 CST 1 787 Eukaryotic Initiation Factors Gene Family AT5G57870 64.8 1.2e-276 949.9
Cmo11g00451 CST 45 836 Eukaryotic Initiation Factors Gene Family AT5G57870 61.5 5.8e-260 894.4
Cmo09g00404 CST 2 765 Eukaryotic Initiation Factors Gene Family AT5G57870 59.4 9.3e-250 860.5
Cmo01g01725 CST 2 766 Eukaryotic Initiation Factors Gene Family AT5G57870 57.2 7.4e-239 824.3
Cmo10g00493 CST 2 787 Eukaryotic Initiation Factors Gene Family AT2G24050 56.3 3.5e-230 795.4
Cmo09g00404 CST 2 766 Eukaryotic Initiation Factors Gene Family AT2G24050 55.9 1.4e-223 773.5
Cmo01g01725 CST 2 767 Eukaryotic Initiation Factors Gene Family AT2G24050 54.2 1.5e-220 763.5
Cmo11g00451 CST 45 836 Eukaryotic Initiation Factors Gene Family AT2G24050 54.4 1.3e-219 760.4
Cmo10g00493 CST 247 437 Eukaryotic Initiation Factors Gene Family AT1G62410 52.4 5.9e-48 188.3
Cmo11g00451 CST 296 486 Eukaryotic Initiation Factors Gene Family AT1G62410 52.4 1.3e-47 187.2
Cmo05g00505 . 1 448 Eukaryotic Initiation Factors Gene Family AT1G77840 63.3 1.2e-140 497.3
Cmo05g00505 . 1 448 Eukaryotic Initiation Factors Gene Family AT1G36730 62.1 4.6e-121 432.2
Cmo01g01713 CCT,CST 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 84.3 1.0e-58 223.4
Cmo09g00416 CCT,CST 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 84.3 1.3e-58 223.0
Cmo18g01144 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 2.5e-57 218.8
Cmo11g00460 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 5.6e-57 217.6
Cmo04g01767 . 296 422 Eukaryotic Initiation Factors Gene Family AT1G26630 81.1 1.3e-56 216.5
Cmo05g00354 CCT 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 79.5 1.2e-54 209.9
Cmo10g00501 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 62.2 9.0e-39 157.1
Cmo01g01713 CCT,CST 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 86.2 1.2e-76 283.1
Cmo04g01767 . 296 454 Eukaryotic Initiation Factors Gene Family AT1G69410 84.3 2.1e-76 282.3
Cmo18g01144 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 83.6 4.7e-76 281.2
Cmo05g00354 CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.9 3.1e-75 278.5
Cmo11g00460 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.3 4.0e-75 278.1
Cmo09g00416 CCT,CST 1 188 Eukaryotic Initiation Factors Gene Family AT1G69410 72.9 5.4e-72 267.7
Cmo10g00501 . 1 149 Eukaryotic Initiation Factors Gene Family AT1G69410 64.4 7.1e-48 187.6
Cmo01g01713 CCT,CST 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 91.2 1.0e-78 290.0
Cmo04g01767 . 296 454 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 9.6e-77 283.5
Cmo18g01144 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 86.8 2.8e-76 282.0
Cmo11g00460 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 3.6e-76 281.6
Cmo05g00354 CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 88.1 4.0e-75 278.1
Cmo09g00416 CCT,CST 1 188 Eukaryotic Initiation Factors Gene Family AT1G13950 77.1 4.4e-74 274.6
Cmo10g00501 . 1 149 Eukaryotic Initiation Factors Gene Family AT1G13950 67.1 1.5e-50 196.4
Cmo09g01088 . 333 1346 Eukaryotic Initiation Factors Gene Family AT1G76810 68.3 0.0e+00 1134.0
Cmo01g01046 . 332 1549 Eukaryotic Initiation Factors Gene Family AT1G76810 56.4 8.6e-293 1004.2
Cmo09g01088 . 467 1346 Eukaryotic Initiation Factors Gene Family AT1G21160 59.9 1.5e-261 900.2
Cmo02g00654 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.3 8.6e-125 443.7
Cmo20g01053 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.3 1.9e-124 442.6
Cmo02g00654 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 68.0 3.5e-94 342.0
Cmo20g01053 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 67.6 6.0e-94 341.3
Cmo04g00516 . 15 654 Eukaryotic Initiation Factors Gene Family AT2G23350 59.8 8.6e-204 707.6
Cmo16g00375 . 15 653 Eukaryotic Initiation Factors Gene Family AT2G23350 59.0 2.8e-202 702.6
Cmo19g00614 CST 5 647 Eukaryotic Initiation Factors Gene Family AT2G23350 59.0 8.0e-202 701.0
Cmo11g01376 CST 25 643 Eukaryotic Initiation Factors Gene Family AT2G23350 59.2 1.1e-195 680.6
Cmo04g02588 . 35 636 Eukaryotic Initiation Factors Gene Family AT2G23350 51.1 1.0e-140 498.0
Cmo04g00516 . 3 651 Eukaryotic Initiation Factors Gene Family AT4G34110 70.9 1.5e-253 872.8
Cmo16g00375 . 18 650 Eukaryotic Initiation Factors Gene Family AT4G34110 71.0 3.4e-250 861.7
Cmo19g00614 CST 1 644 Eukaryotic Initiation Factors Gene Family AT4G34110 69.5 2.2e-249 859.0
Cmo11g01376 CST 20 640 Eukaryotic Initiation Factors Gene Family AT4G34110 70.0 2.3e-243 839.0
Cmo15g00576 . 27 662 Eukaryotic Initiation Factors Gene Family AT4G34110 52.7 2.0e-165 580.1
Cmo04g02588 . 20 655 Eukaryotic Initiation Factors Gene Family AT4G34110 53.9 1.3e-164 577.4
Cmo15g00576 . 1 651 Eukaryotic Initiation Factors Gene Family AT1G22760 55.2 4.9e-183 638.6
Cmo04g02588 . 1 636 Eukaryotic Initiation Factors Gene Family AT1G22760 56.5 4.7e-178 622.1
Cmo04g00516 . 3 626 Eukaryotic Initiation Factors Gene Family AT1G22760 54.4 1.1e-169 594.3
Cmo16g00375 . 29 627 Eukaryotic Initiation Factors Gene Family AT1G22760 54.4 7.1e-166 581.6
Cmo19g00614 CST 25 632 Eukaryotic Initiation Factors Gene Family AT1G22760 53.7 1.7e-164 577.0
Cmo11g01376 CST 3 620 Eukaryotic Initiation Factors Gene Family AT1G22760 53.0 2.8e-162 569.7
Cmo15g00576 . 3 646 Eukaryotic Initiation Factors Gene Family AT1G71770 54.3 5.2e-180 628.6
Cmo04g02588 . 33 655 Eukaryotic Initiation Factors Gene Family AT1G71770 55.3 6.6e-175 611.7
Cmo04g00516 . 29 629 Eukaryotic Initiation Factors Gene Family AT1G71770 54.7 2.3e-167 586.6
Cmo19g00614 CST 25 642 Eukaryotic Initiation Factors Gene Family AT1G71770 53.7 8.6e-167 584.7
Cmo16g00375 . 29 630 Eukaryotic Initiation Factors Gene Family AT1G71770 54.3 8.6e-167 584.7
Cmo11g01376 CST 21 641 Eukaryotic Initiation Factors Gene Family AT1G71770 52.8 1.2e-163 574.3
Cmo16g00375 . 3 654 Eukaryotic Initiation Factors Gene Family AT1G49760 70.6 1.5e-256 882.9
Cmo04g00516 . 28 655 Eukaryotic Initiation Factors Gene Family AT1G49760 73.6 4.8e-255 877.9
Cmo19g00614 CST 24 647 Eukaryotic Initiation Factors Gene Family AT1G49760 72.4 6.6e-252 867.5
Cmo11g01376 CST 20 643 Eukaryotic Initiation Factors Gene Family AT1G49760 71.2 1.1e-246 850.1
Cmo15g00576 . 34 661 Eukaryotic Initiation Factors Gene Family AT1G49760 52.7 8.2e-162 568.2
Cmo04g02588 . 33 654 Eukaryotic Initiation Factors Gene Family AT1G49760 54.1 5.0e-159 558.9
Cmo14g00244 . 526 1125 Eukaryotic Initiation Factors Gene Family AT2G36660 50.1 1.9e-149 526.9
Cmo04g02588 . 95 405 Eukaryotic Initiation Factors Gene Family AT1G34140 55.4 7.4e-89 325.1
Cmo17g00105 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07920 96.4 1.4e-253 872.5
Cmo08g00989 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07920 96.4 1.8e-253 872.1
Cmo15g00448 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 7.5e-252 866.7
Cmo15g00449 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 7.5e-252 866.7
Cmo02g00876 . 125 573 Eukaryotic Initiation Factors Gene Family AT1G07920 94.7 1.7e-251 865.5
Cmo20g00507 . 599 1037 Eukaryotic Initiation Factors Gene Family AT1G07920 95.2 1.7e-248 855.5
Cmo17g00105 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07930 80.5 1.7e-201 699.1
Cmo08g00989 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07930 80.5 2.2e-201 698.7
Cmo02g00876 . 125 573 Eukaryotic Initiation Factors Gene Family AT1G07930 79.7 3.8e-201 698.0
Cmo15g00448 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 7.2e-200 693.7
Cmo15g00449 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.1 1.6e-199 692.6
Cmo20g00507 . 599 1037 Eukaryotic Initiation Factors Gene Family AT1G07930 79.7 1.5e-197 686.0
Cmo17g00105 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07940 96.4 1.4e-253 872.5
Cmo08g00989 . 1 446 Eukaryotic Initiation Factors Gene Family AT1G07940 96.4 1.8e-253 872.1
Cmo15g00448 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 7.5e-252 866.7
Cmo15g00449 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 7.5e-252 866.7
Cmo02g00876 . 125 573 Eukaryotic Initiation Factors Gene Family AT1G07940 94.7 1.7e-251 865.5
Cmo20g00507 . 599 1037 Eukaryotic Initiation Factors Gene Family AT1G07940 95.2 1.7e-248 855.5
Cmo17g00105 . 1 446 Eukaryotic Initiation Factors Gene Family AT5G60390 96.4 1.4e-253 872.5
Cmo08g00989 . 1 446 Eukaryotic Initiation Factors Gene Family AT5G60390 96.4 1.8e-253 872.1
Cmo15g00448 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 7.5e-252 866.7
Cmo15g00449 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 7.5e-252 866.7
Cmo02g00876 . 125 573 Eukaryotic Initiation Factors Gene Family AT5G60390 94.7 1.7e-251 865.5
Cmo20g00507 . 599 1037 Eukaryotic Initiation Factors Gene Family AT5G60390 95.2 1.7e-248 855.5
Cmo13g00833 CST 1 226 Eukaryotic Initiation Factors Gene Family AT5G12110 52.4 4.6e-48 188.7
Cmo18g00213 CST 1307 1530 Eukaryotic Initiation Factors Gene Family AT5G12110 52.0 3.1e-44 176.0
Cmo18g00211 . 1 224 Eukaryotic Initiation Factors Gene Family AT5G12110 50.6 1.5e-43 173.7
Cmo13g00833 CST 1 226 Eukaryotic Initiation Factors Gene Family AT5G19510 59.3 3.7e-50 195.7
Cmo18g00211 . 1 224 Eukaryotic Initiation Factors Gene Family AT5G19510 59.6 6.6e-47 184.9
Cmo18g00213 CST 1307 1530 Eukaryotic Initiation Factors Gene Family AT5G19510 59.1 6.6e-47 184.9
Cmo13g00833 CST 7 226 Eukaryotic Initiation Factors Gene Family AT1G30230 77.9 1.1e-69 260.8
Cmo18g00211 . 4 225 Eukaryotic Initiation Factors Gene Family AT1G30230 75.7 5.4e-69 258.5
Cmo18g00213 CST 1310 1530 Eukaryotic Initiation Factors Gene Family AT1G30230 75.1 6.0e-68 255.0
Cmo13g00833 CST 4 226 Eukaryotic Initiation Factors Gene Family AT2G18110 77.7 3.0e-71 265.8
Cmo18g00211 . 4 224 Eukaryotic Initiation Factors Gene Family AT2G18110 76.9 2.5e-70 262.7
Cmo18g00213 CST 1310 1530 Eukaryotic Initiation Factors Gene Family AT2G18110 76.4 2.5e-70 262.7
Cmo04g02055 . 733 1154 Eukaryotic Initiation Factors Gene Family AT1G57720 72.7 2.3e-170 595.9
Cmo16g00830 CST 1 411 Eukaryotic Initiation Factors Gene Family AT1G57720 76.7 1.8e-167 586.3
Cmo04g00957 CST 1 412 Eukaryotic Initiation Factors Gene Family AT1G57720 73.6 3.2e-164 575.5
Cmo06g00918 . 1 479 Eukaryotic Initiation Factors Gene Family AT1G57720 62.6 1.6e-160 563.1
Cmo20g00272 . 1 843 Eukaryotic Initiation Factors Gene Family AT1G56070 94.0 0.0e+00 1603.2
Cmo20g00275 . 114 956 Eukaryotic Initiation Factors Gene Family AT1G56070 93.8 0.0e+00 1602.0
Cmo11g00806 . 552 1581 Eukaryotic Initiation Factors Gene Family AT3G22980 70.7 0.0e+00 1427.9
Cmo17g01343 . 1 434 Eukaryotic Initiation Factors Gene Family AT5G47880 88.2 6.6e-221 763.8
Cmo08g00033 . 1 434 Eukaryotic Initiation Factors Gene Family AT5G47880 87.8 4.3e-220 761.1
Cmo17g01343 . 6 436 Eukaryotic Initiation Factors Gene Family AT1G12920 89.8 5.2e-226 780.8
Cmo08g00033 . 6 436 Eukaryotic Initiation Factors Gene Family AT1G12920 89.3 2.0e-225 778.9
Cmo17g01343 . 1 436 Eukaryotic Initiation Factors Gene Family AT3G26618 90.8 1.7e-229 792.3
Cmo08g00033 . 1 436 Eukaryotic Initiation Factors Gene Family AT3G26618 90.4 1.9e-228 788.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000332 9 4 7 8 7 4 4 3 3 3 4 4 5 4 4 5 4 7 7 4 4 4 4 4 3 3 4 4 4 2 136
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo11g00460 Cmo_Chr11 FPKM 56.828403 58.063156 96.618706 96.317513 47.05061 50.881397 43.151611 81.212479 83.989822 82.501923