Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00464 ATGGCGTTGTTGCGCAAATTGTTCTTTCGGAAGCCGCCCGATGGTCTTCTCGAGATCTGTGAAAGAGTTTATGTTTTTGATTGCTGTTTTACCACAGATTCATGGAAGGAAGAGAATTATGAAGTTTATTTGGGTGGAATAGTGGCTCAACTCCGTGAGCATTTAGTAGACGCATCTTTCTTGGTATTCAATTTTAGGATCTTAGAGATGCAAAGTCAGGTGGGCGATATCTTATCTAAGTTTGATATGACCATAATGGACTACCCTCAGCAGTACGAGGGTTGCCCAGTTCTGACGATGGAAGTGCTTCACCATTTTCTAAGATCATGTGAGAGTTGGCTTTCCCTTGGGCAGAATAACGTTTTGTTAATGCACTGTGAACGTGGTGGTTGGCCAGTTCTAGCGTTCATGCTTTCGGCTCTCTTGATTTATAGGAAGCAATATAGTGGGGAGCAAAGGACACTGGACATGGTTTATAGGCAGGCACCTCGGGAGCTTTTGCATTTTTTTTCTCCTATGAATCCAGTTCCTTCTCAATTAAGGTATCTGCAATATGTCGCAAGGAGGAATGTAGCCTTAGAATGGCCACCTGTGGACAGAGCTCTCACTTTAGACTGTATCATTTTGAGATTTATTCCAAATTTTGATGGAGAGGGTGGTTGCCGACCAATATTTCGAATATATGGACAAGATCCACTACTTGTCAGCGATCGAACTCCTAAAGTTCTGTATTCAACTCCAAAAAGAAGCAAAAATCTCCGAACTTACAAACAGGCAGAAGCAGAACTGGTTAAGATTGATGTAAATTGCCATATTCAAGGTGATGTTGTTCTTGAGTGCATCTCCTTGCATGACAACATGGAATTTGAAGAGATGATGTTCAGAGCAATGTTTAATACTGCTTTTATTCGCTCTAATATTTTAATTCTCAACCGTGAAGAGATCGACACTTTGTGGAATGGCAAAGATAGATTTCCAAAGGACTTTCGAGCAGAGATTCTTTTCTCTGAGATGGATGCTGCAACGTGTCCTGTTGCAAATGATGTAGTTTGCTTTGAGGAGGAAGGTCTCCCCATGGAAGCATTTGCTAAAGTGCAAGAGATCTTTAGTCATGTGGATTGGTTAGATCCCAAAGCAGATGTTGCGCTCAATGTTCTCCATCAGATGAATGCCTTAAGCATAGCCCAAGAGAAGTCAGAAAGTAGTTCTCCTCGGAGTACGCCAGTTAGTCCTTTATTTCAGAGTACAAGTCCCAGAAAACTTTCGCTGAAGAAATTCACAATGGATAACAAAACAAAAATCCTAGAGAAGGAACAATTTAGTCCAACATCTAAATTTTCACTGTATGCTGCTAAATCTAATTCAGTATTCCAACAGGTGCCTCAATCTTCGGAGTGTTTCCCACTCGACATTTTGCAAGATTCGCCAATTTCAGAGAGTAGCGATAGGACCTCATTCAGTGCTTCGGTTGGAAGCCACTCAGTTTTTGATTCTGAAGGAGAAACAGAGGTTTCTCATCTGAAAACTGTATCTTCATCTTTTCCGAATGCAGCATTGGCTGTTTCTCTTGCACCCGAGTCTCTCCAGACTAAGAGTCTCCTAACAGAAAGAATAGTCCCATCACCTCCTCCTCTCCCCCAACTTTCCACGAATATTTCTGCTGCTAATTCTCTAACTTATCCTTCCGCTCCTCCAACTGCCTTATCACTTCGGTCTAATAACTTTTCAACTCTAAGACCAGATAAATTCTCACTCACTGAGGTAGTAGAAAACTATTCGAAGGATCAAAGGCAGTTATCAACCGTTAGCCCCCCACTTTCTGTAACCTCAATACAATCATCTCCACTGCCTCCTTCTACACCTCCTTTGAAGGATACCATAGCAGCTAGAGTTAAAGCTTCTCTGCCACCACCCCCTCCTTTTTCTTCAACATTAGCTTCCCATCCTGCAAATGCATCCTTTTTGCCTCAACCACCACCACCTCCTTCTCCTCCTTCAACATCCATTGTTAGTCGTAAAATTTCATCTCCAATCCCTTCACCACCACCACCTCCTCCTCCAATGGACATTACGGATCCTAAAATTTTCTCTCCCGTGCCTCCACCACCACCGCCTCCTCCTCTGACATCCAAACAGGTTGAAAGTACTTCAACATCTCCATTTGTTCCTCCTCCACCACCACCACCTTTTCCTATGACGTCCAGCCAGGTTGGAAGTATTTCTACATCTTTGTCTGTTCCTCCACCGCCGCCACCCCTTCCGTCCAGACAGGATGGAAATACTTCAACATCTCCACCTGTTCCTCCTCCACCACCACCTGCTCCCACCAAGGGCTCCTCTCCACCTGTTCCTTCTGCTCCCCCTCCTCCTACCCTTTCTGGGAGGGGGACTTTAAAATCAGGTGAAGTGTTTCCTGGTTCTCCTTTGTCTTGGTCCTCTCTAGGGCCACCGTGTATTTCTCCATCAACAAAGGGACGAAGTTTGTCACGCACTATAAATTCAAGAGCACATATAACTAAGAAACTGAAGCCATTGCATTGGTTAAAGTTATCGAAAGCAGTGCAAGGAAGCTTATGGGCTGAAGCTCAAAAAACTGGTGAAGCTGCCAGGGCACCAGAGATTGACATGTCAGAGCTTGAAAGTCTTTTCTCAGCTGCAGTTCCTGCTTCTGATCAGAACCGGAAGTCGGGTGGACGTGGTTCTGTTGGGAATAAACCCGAAAAAGTACAACTGATTGATCACAGGCGAGCTTACAATTGTGAAATCATGCTTTCAAAGGTCAAGGCACCTTTGACTGATTTAATGAGTTCTGTGCTTGACCTCGAAGATTCAGCACTGGATATCGATCAGGTTGAGAATCTTATTAAGTTTTGCCCAACAAAAGAGGAAATGGATTTACTCAAGGGCTACACTGGAGAAAAGGAGATGCTTGGAAAATGTGAACAGTTCTTCTTAGAGTTGATGCAAGTACCTCGTGTAGAATCTAAGCTTCGAGTTTTCTCATTTAAAATACAGTTCATCTCTCAGATCACTGACCTCAAGAAAAGCCTGAACTTTGTCAACTCTGCAGCAGAAGAGATAAAAAGTTCAGTCAAGTTGAAGAGAGTCATGCAGACAATACTATCACTAGGAAATGCTTTAAACCAGGGAACGGCGAGGGGCTCTGCTATAGGATTTAGGCTGGATAGCCTTCTTAAACTAACAGAAACTCGTGCACGAAACAACAAGATGACTCTAATGCATTATCTTTGCAAGATACTTGCTGATAAACTGCCAGAAGTTCTGGATTTTTCAAACGATCTTCCAAGCTTGGAGCCTGCATCAAAGGAACAATTAAAGGTTTTGGCAGAGGAGATGCAATCAATTAGCAAGGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACCTCTGAAAATGATGGCCCTATATCCAATAATTTCCGAACGGTTTTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGAGAACTTTGGCTTCACTGTACTCTAGCGTGGGTAGAAGTGTAGATTCTTTGATTCTTTACTTCGGAGAAGACCCAGCTCGCTGCCCCTTTGAGCAAGTTATATCAACCTTATGCAACTTTGTGAGAATGTTTAACCGAGCCCACGAGGAGAACTGCAAGCAGATAGAGCTGGAAATGAAGAAAGCAACTGAAAGCGAAAAATCAAAGACAGGGCACATGCATAAGAGGTCAAGAACAAAACAGTTATCACACTCCCAGATCGAGATTGGCAATGTGAAGTAA 3765 43.24 MALLRKLFFRKPPDGLLEICERVYVFDCCFTTDSWKEENYEVYLGGIVAQLREHLVDASFLVFNFRILEMQSQVGDILSKFDMTIMDYPQQYEGCPVLTMEVLHHFLRSCESWLSLGQNNVLLMHCERGGWPVLAFMLSALLIYRKQYSGEQRTLDMVYRQAPRELLHFFSPMNPVPSQLRYLQYVARRNVALEWPPVDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPLLVSDRTPKVLYSTPKRSKNLRTYKQAEAELVKIDVNCHIQGDVVLECISLHDNMEFEEMMFRAMFNTAFIRSNILILNREEIDTLWNGKDRFPKDFRAEILFSEMDAATCPVANDVVCFEEEGLPMEAFAKVQEIFSHVDWLDPKADVALNVLHQMNALSIAQEKSESSSPRSTPVSPLFQSTSPRKLSLKKFTMDNKTKILEKEQFSPTSKFSLYAAKSNSVFQQVPQSSECFPLDILQDSPISESSDRTSFSASVGSHSVFDSEGETEVSHLKTVSSSFPNAALAVSLAPESLQTKSLLTERIVPSPPPLPQLSTNISAANSLTYPSAPPTALSLRSNNFSTLRPDKFSLTEVVENYSKDQRQLSTVSPPLSVTSIQSSPLPPSTPPLKDTIAARVKASLPPPPPFSSTLASHPANASFLPQPPPPPSPPSTSIVSRKISSPIPSPPPPPPPMDITDPKIFSPVPPPPPPPPLTSKQVESTSTSPFVPPPPPPPFPMTSSQVGSISTSLSVPPPPPPLPSRQDGNTSTSPPVPPPPPPAPTKGSSPPVPSAPPPPTLSGRGTLKSGEVFPGSPLSWSSLGPPCISPSTKGRSLSRTINSRAHITKKLKPLHWLKLSKAVQGSLWAEAQKTGEAARAPEIDMSELESLFSAAVPASDQNRKSGGRGSVGNKPEKVQLIDHRRAYNCEIMLSKVKAPLTDLMSSVLDLEDSALDIDQVENLIKFCPTKEEMDLLKGYTGEKEMLGKCEQFFLELMQVPRVESKLRVFSFKIQFISQITDLKKSLNFVNSAAEEIKSSVKLKRVMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKILADKLPEVLDFSNDLPSLEPASKEQLKVLAEEMQSISKGLEKVVQELSTSENDGPISNNFRTVLKEFLRFAEAEVRTLASLYSSVGRSVDSLILYFGEDPARCPFEQVISTLCNFVRMFNRAHEENCKQIELEMKKATESEKSKTGHMHKRSRTKQLSHSQIEIGNVK 1254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2265801 2278181 + CmoCh11G004640.1 Cmo11g00464 391083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 676 710 - -
Cmo11g00464 1254 ProSiteProfiles Formin homology-2 (FH2) domain profile. 832 1231 IPR015425 -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 1224 1254 - -
Cmo11g00464 1254 Pfam Formin Homology 2 Domain 839 1206 IPR015425 -
Cmo11g00464 1254 PANTHER FORMIN-J 1 748 - -
Cmo11g00464 1254 PANTHER FORMIN-J 746 1234 - -
Cmo11g00464 1254 SUPERFAMILY Formin homology 2 domain (FH2 domain) 845 1222 - -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 595 831 - -
Cmo11g00464 1254 Coils Coil 1206 1226 - -
Cmo11g00464 1254 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Cmo11g00464 1254 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 885 906 - -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 595 614 - -
Cmo11g00464 1254 Gene3D Protein tyrosine phosphatase superfamily 15 198 IPR029021 -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 653 667 - -
Cmo11g00464 1254 SMART PTEN_C2_2 197 337 IPR014020 -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 763 791 - -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 813 831 - -
Cmo11g00464 1254 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 186 IPR029021 -
Cmo11g00464 1254 SMART it6_source 832 1252 IPR015425 -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 719 733 - -
Cmo11g00464 1254 MobiDBLite consensus disorder prediction 396 415 - -
Cmo11g00464 1254 Gene3D - 199 341 - -
Cmo11g00464 1254 Gene3D Formin, FH2 domain 830 1216 IPR042201 -
Cmo11g00464 1254 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01701 Cmo-Chr2:9740911 Cmo11g00464 Cmo-Chr11:2265801 4.38E-174 dispersed
Cmo11g00187 Cmo-Chr11:912910 Cmo11g00464 Cmo-Chr11:2265801 1.16E-137 dispersed
Cmo11g00464 Cmo-Chr11:2265801 Cmo13g01141 Cmo-Chr13:9242670 3.54E-138 dispersed
Cmo10g00505 Cmo-Chr10:2257120 Cmo11g00464 Cmo-Chr11:2265801 0 wgd
Cmo11g00464 Cmo-Chr11:2265801 Cmo09g00417 Cmo-Chr9:1825147 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00464 - - csv:101221713 1867.43