Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00464 | ATGGCGTTGTTGCGCAAATTGTTCTTTCGGAAGCCGCCCGATGGTCTTCTCGAGATCTGTGAAAGAGTTTATGTTTTTGATTGCTGTTTTACCACAGATTCATGGAAGGAAGAGAATTATGAAGTTTATTTGGGTGGAATAGTGGCTCAACTCCGTGAGCATTTAGTAGACGCATCTTTCTTGGTATTCAATTTTAGGATCTTAGAGATGCAAAGTCAGGTGGGCGATATCTTATCTAAGTTTGATATGACCATAATGGACTACCCTCAGCAGTACGAGGGTTGCCCAGTTCTGACGATGGAAGTGCTTCACCATTTTCTAAGATCATGTGAGAGTTGGCTTTCCCTTGGGCAGAATAACGTTTTGTTAATGCACTGTGAACGTGGTGGTTGGCCAGTTCTAGCGTTCATGCTTTCGGCTCTCTTGATTTATAGGAAGCAATATAGTGGGGAGCAAAGGACACTGGACATGGTTTATAGGCAGGCACCTCGGGAGCTTTTGCATTTTTTTTCTCCTATGAATCCAGTTCCTTCTCAATTAAGGTATCTGCAATATGTCGCAAGGAGGAATGTAGCCTTAGAATGGCCACCTGTGGACAGAGCTCTCACTTTAGACTGTATCATTTTGAGATTTATTCCAAATTTTGATGGAGAGGGTGGTTGCCGACCAATATTTCGAATATATGGACAAGATCCACTACTTGTCAGCGATCGAACTCCTAAAGTTCTGTATTCAACTCCAAAAAGAAGCAAAAATCTCCGAACTTACAAACAGGCAGAAGCAGAACTGGTTAAGATTGATGTAAATTGCCATATTCAAGGTGATGTTGTTCTTGAGTGCATCTCCTTGCATGACAACATGGAATTTGAAGAGATGATGTTCAGAGCAATGTTTAATACTGCTTTTATTCGCTCTAATATTTTAATTCTCAACCGTGAAGAGATCGACACTTTGTGGAATGGCAAAGATAGATTTCCAAAGGACTTTCGAGCAGAGATTCTTTTCTCTGAGATGGATGCTGCAACGTGTCCTGTTGCAAATGATGTAGTTTGCTTTGAGGAGGAAGGTCTCCCCATGGAAGCATTTGCTAAAGTGCAAGAGATCTTTAGTCATGTGGATTGGTTAGATCCCAAAGCAGATGTTGCGCTCAATGTTCTCCATCAGATGAATGCCTTAAGCATAGCCCAAGAGAAGTCAGAAAGTAGTTCTCCTCGGAGTACGCCAGTTAGTCCTTTATTTCAGAGTACAAGTCCCAGAAAACTTTCGCTGAAGAAATTCACAATGGATAACAAAACAAAAATCCTAGAGAAGGAACAATTTAGTCCAACATCTAAATTTTCACTGTATGCTGCTAAATCTAATTCAGTATTCCAACAGGTGCCTCAATCTTCGGAGTGTTTCCCACTCGACATTTTGCAAGATTCGCCAATTTCAGAGAGTAGCGATAGGACCTCATTCAGTGCTTCGGTTGGAAGCCACTCAGTTTTTGATTCTGAAGGAGAAACAGAGGTTTCTCATCTGAAAACTGTATCTTCATCTTTTCCGAATGCAGCATTGGCTGTTTCTCTTGCACCCGAGTCTCTCCAGACTAAGAGTCTCCTAACAGAAAGAATAGTCCCATCACCTCCTCCTCTCCCCCAACTTTCCACGAATATTTCTGCTGCTAATTCTCTAACTTATCCTTCCGCTCCTCCAACTGCCTTATCACTTCGGTCTAATAACTTTTCAACTCTAAGACCAGATAAATTCTCACTCACTGAGGTAGTAGAAAACTATTCGAAGGATCAAAGGCAGTTATCAACCGTTAGCCCCCCACTTTCTGTAACCTCAATACAATCATCTCCACTGCCTCCTTCTACACCTCCTTTGAAGGATACCATAGCAGCTAGAGTTAAAGCTTCTCTGCCACCACCCCCTCCTTTTTCTTCAACATTAGCTTCCCATCCTGCAAATGCATCCTTTTTGCCTCAACCACCACCACCTCCTTCTCCTCCTTCAACATCCATTGTTAGTCGTAAAATTTCATCTCCAATCCCTTCACCACCACCACCTCCTCCTCCAATGGACATTACGGATCCTAAAATTTTCTCTCCCGTGCCTCCACCACCACCGCCTCCTCCTCTGACATCCAAACAGGTTGAAAGTACTTCAACATCTCCATTTGTTCCTCCTCCACCACCACCACCTTTTCCTATGACGTCCAGCCAGGTTGGAAGTATTTCTACATCTTTGTCTGTTCCTCCACCGCCGCCACCCCTTCCGTCCAGACAGGATGGAAATACTTCAACATCTCCACCTGTTCCTCCTCCACCACCACCTGCTCCCACCAAGGGCTCCTCTCCACCTGTTCCTTCTGCTCCCCCTCCTCCTACCCTTTCTGGGAGGGGGACTTTAAAATCAGGTGAAGTGTTTCCTGGTTCTCCTTTGTCTTGGTCCTCTCTAGGGCCACCGTGTATTTCTCCATCAACAAAGGGACGAAGTTTGTCACGCACTATAAATTCAAGAGCACATATAACTAAGAAACTGAAGCCATTGCATTGGTTAAAGTTATCGAAAGCAGTGCAAGGAAGCTTATGGGCTGAAGCTCAAAAAACTGGTGAAGCTGCCAGGGCACCAGAGATTGACATGTCAGAGCTTGAAAGTCTTTTCTCAGCTGCAGTTCCTGCTTCTGATCAGAACCGGAAGTCGGGTGGACGTGGTTCTGTTGGGAATAAACCCGAAAAAGTACAACTGATTGATCACAGGCGAGCTTACAATTGTGAAATCATGCTTTCAAAGGTCAAGGCACCTTTGACTGATTTAATGAGTTCTGTGCTTGACCTCGAAGATTCAGCACTGGATATCGATCAGGTTGAGAATCTTATTAAGTTTTGCCCAACAAAAGAGGAAATGGATTTACTCAAGGGCTACACTGGAGAAAAGGAGATGCTTGGAAAATGTGAACAGTTCTTCTTAGAGTTGATGCAAGTACCTCGTGTAGAATCTAAGCTTCGAGTTTTCTCATTTAAAATACAGTTCATCTCTCAGATCACTGACCTCAAGAAAAGCCTGAACTTTGTCAACTCTGCAGCAGAAGAGATAAAAAGTTCAGTCAAGTTGAAGAGAGTCATGCAGACAATACTATCACTAGGAAATGCTTTAAACCAGGGAACGGCGAGGGGCTCTGCTATAGGATTTAGGCTGGATAGCCTTCTTAAACTAACAGAAACTCGTGCACGAAACAACAAGATGACTCTAATGCATTATCTTTGCAAGATACTTGCTGATAAACTGCCAGAAGTTCTGGATTTTTCAAACGATCTTCCAAGCTTGGAGCCTGCATCAAAGGAACAATTAAAGGTTTTGGCAGAGGAGATGCAATCAATTAGCAAGGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACCTCTGAAAATGATGGCCCTATATCCAATAATTTCCGAACGGTTTTAAAGGAGTTCCTTCGTTTTGCTGAAGCTGAAGTGAGAACTTTGGCTTCACTGTACTCTAGCGTGGGTAGAAGTGTAGATTCTTTGATTCTTTACTTCGGAGAAGACCCAGCTCGCTGCCCCTTTGAGCAAGTTATATCAACCTTATGCAACTTTGTGAGAATGTTTAACCGAGCCCACGAGGAGAACTGCAAGCAGATAGAGCTGGAAATGAAGAAAGCAACTGAAAGCGAAAAATCAAAGACAGGGCACATGCATAAGAGGTCAAGAACAAAACAGTTATCACACTCCCAGATCGAGATTGGCAATGTGAAGTAA | 3765 | 43.24 | MALLRKLFFRKPPDGLLEICERVYVFDCCFTTDSWKEENYEVYLGGIVAQLREHLVDASFLVFNFRILEMQSQVGDILSKFDMTIMDYPQQYEGCPVLTMEVLHHFLRSCESWLSLGQNNVLLMHCERGGWPVLAFMLSALLIYRKQYSGEQRTLDMVYRQAPRELLHFFSPMNPVPSQLRYLQYVARRNVALEWPPVDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPLLVSDRTPKVLYSTPKRSKNLRTYKQAEAELVKIDVNCHIQGDVVLECISLHDNMEFEEMMFRAMFNTAFIRSNILILNREEIDTLWNGKDRFPKDFRAEILFSEMDAATCPVANDVVCFEEEGLPMEAFAKVQEIFSHVDWLDPKADVALNVLHQMNALSIAQEKSESSSPRSTPVSPLFQSTSPRKLSLKKFTMDNKTKILEKEQFSPTSKFSLYAAKSNSVFQQVPQSSECFPLDILQDSPISESSDRTSFSASVGSHSVFDSEGETEVSHLKTVSSSFPNAALAVSLAPESLQTKSLLTERIVPSPPPLPQLSTNISAANSLTYPSAPPTALSLRSNNFSTLRPDKFSLTEVVENYSKDQRQLSTVSPPLSVTSIQSSPLPPSTPPLKDTIAARVKASLPPPPPFSSTLASHPANASFLPQPPPPPSPPSTSIVSRKISSPIPSPPPPPPPMDITDPKIFSPVPPPPPPPPLTSKQVESTSTSPFVPPPPPPPFPMTSSQVGSISTSLSVPPPPPPLPSRQDGNTSTSPPVPPPPPPAPTKGSSPPVPSAPPPPTLSGRGTLKSGEVFPGSPLSWSSLGPPCISPSTKGRSLSRTINSRAHITKKLKPLHWLKLSKAVQGSLWAEAQKTGEAARAPEIDMSELESLFSAAVPASDQNRKSGGRGSVGNKPEKVQLIDHRRAYNCEIMLSKVKAPLTDLMSSVLDLEDSALDIDQVENLIKFCPTKEEMDLLKGYTGEKEMLGKCEQFFLELMQVPRVESKLRVFSFKIQFISQITDLKKSLNFVNSAAEEIKSSVKLKRVMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKILADKLPEVLDFSNDLPSLEPASKEQLKVLAEEMQSISKGLEKVVQELSTSENDGPISNNFRTVLKEFLRFAEAEVRTLASLYSSVGRSVDSLILYFGEDPARCPFEQVISTLCNFVRMFNRAHEENCKQIELEMKKATESEKSKTGHMHKRSRTKQLSHSQIEIGNVK | 1254 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2265801 | 2278181 | + | CmoCh11G004640.1 | Cmo11g00464 | 391083 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 676 | 710 | - | - | |
Cmo11g00464 | 1254 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 832 | 1231 | IPR015425 | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 1224 | 1254 | - | - | |
Cmo11g00464 | 1254 | Pfam | Formin Homology 2 Domain | 839 | 1206 | IPR015425 | - | |
Cmo11g00464 | 1254 | PANTHER | FORMIN-J | 1 | 748 | - | - | |
Cmo11g00464 | 1254 | PANTHER | FORMIN-J | 746 | 1234 | - | - | |
Cmo11g00464 | 1254 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 845 | 1222 | - | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 595 | 831 | - | - | |
Cmo11g00464 | 1254 | Coils | Coil | 1206 | 1226 | - | - | |
Cmo11g00464 | 1254 | ProSiteProfiles | C2 tensin-type domain profile. | 199 | 338 | IPR014020 | - | |
Cmo11g00464 | 1254 | Pfam | C2 domain of PTEN tumour-suppressor protein | 200 | 337 | IPR014020 | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 885 | 906 | - | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 595 | 614 | - | - | |
Cmo11g00464 | 1254 | Gene3D | Protein tyrosine phosphatase superfamily | 15 | 198 | IPR029021 | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 653 | 667 | - | - | |
Cmo11g00464 | 1254 | SMART | PTEN_C2_2 | 197 | 337 | IPR014020 | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 763 | 791 | - | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 813 | 831 | - | - | |
Cmo11g00464 | 1254 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 12 | 186 | IPR029021 | - | |
Cmo11g00464 | 1254 | SMART | it6_source | 832 | 1252 | IPR015425 | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 719 | 733 | - | - | |
Cmo11g00464 | 1254 | MobiDBLite | consensus disorder prediction | 396 | 415 | - | - | |
Cmo11g00464 | 1254 | Gene3D | - | 199 | 341 | - | - | |
Cmo11g00464 | 1254 | Gene3D | Formin, FH2 domain | 830 | 1216 | IPR042201 | - | |
Cmo11g00464 | 1254 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 338 | IPR035892 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01701 | Cmo-Chr2:9740911 | Cmo11g00464 | Cmo-Chr11:2265801 | 4.38E-174 | dispersed | |
Cmo11g00187 | Cmo-Chr11:912910 | Cmo11g00464 | Cmo-Chr11:2265801 | 1.16E-137 | dispersed | |
Cmo11g00464 | Cmo-Chr11:2265801 | Cmo13g01141 | Cmo-Chr13:9242670 | 3.54E-138 | dispersed | |
Cmo10g00505 | Cmo-Chr10:2257120 | Cmo11g00464 | Cmo-Chr11:2265801 | 0 | wgd | |
Cmo11g00464 | Cmo-Chr11:2265801 | Cmo09g00417 | Cmo-Chr9:1825147 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00464 | - | - | csv:101221713 | 1867.43 |