Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00467 ATGAAACAGAAGTGGCCAAATACGATTTCAGAAACCAGGGTGAATGCAATTGCAGAAGGTTCAGATTCAAGCTGCATCACTTGCCCATTCCCTGCAAATGGGTGCAGTAAGCAAGGAAGGAGTTTAACCTCAAAATTCAAGGGTGTTGTGCCTCAACAGAACGGCCACTGGGGTGCTCAAATTTACGCCAATCATCAGCGTATTTGGCTTGGGACATTCAAGTCAGAAAACGAGGCAGCCATGGCTTATGATAGTGCAGCTATCAGAATCAGGAGTGGAGATTGTCATAGAAACTTTCCTTGGACCAAAGTCACAATTGAAGAGCCAAACTTTCAGACACTTTACACTACAGAAGCTTTGCTTAATATGTTAAAGGACGGTTCTTACACAACCAAATTTGCTGAGTATTTGAGGGACCGTTCTGAAAGTGCACAAACATCAGCCGGCCCCTCTGCAGCAAATATAAATAACAATGAAGGGACTATTAAGCAACTTTTTCAAAAGGAGCTAACACCGAGCGATGTGGGTAAGTTGAACAGATTGGTCATCCCAAAGAAATATGCTGTTAAATACTTTCCTCACGTATCAGCTAGCACATTAGAAAACGTAGAATGTGCCGATGACGATCGTGATGTGCAGCTGATGTTTTTTGACAAAACAATGAGACAATGGAAATTTCGTTACTGTTACTGGAAAAGCAGCCAGAGCTATGTGTTCACACGTGGTTGGAATCGATTTGTGAAGGAAAAACAACTGAAAGCTAATGACACAATAGCTTTCTACTTGTGTGAAGCAGCAAAGACAAATGATGCTAAAACTACATTCTGTGTGGTAGATGTTAAAAATCGTAATGGTGCCAGCTCGGTCGAGAATGAAGCCGAAGAATTGTTATCGCCCAAGAACAAGGACGATGGACTAAAAGGTGATGCTGAAGTTGAGGGTTTCAAATTGTTTGGAGTGCATATTAAGTGA 972 41.77 MKQKWPNTISETRVNAIAEGSDSSCITCPFPANGCSKQGRSLTSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSENEAAMAYDSAAIRIRSGDCHRNFPWTKVTIEEPNFQTLYTTEALLNMLKDGSYTTKFAEYLRDRSESAQTSAGPSAANINNNEGTIKQLFQKELTPSDVGKLNRLVIPKKYAVKYFPHVSASTLENVECADDDRDVQLMFFDKTMRQWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAFYLCEAAKTNDAKTTFCVVDVKNRNGASSVENEAEELLSPKNKDDGLKGDAEVEGFKLFGVHIK 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2286432 2287403 - CmoCh11G004670.1 Cmo11g00467 391086

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00467 323 Gene3D AP2/ERF domain 44 101 IPR036955 GO:0003700|GO:0006355
Cmo11g00467 323 ProSiteProfiles B3 DNA-binding domain profile. 166 281 IPR003340 GO:0003677
Cmo11g00467 323 SMART rav1_2 45 106 IPR001471 GO:0003700|GO:0006355
Cmo11g00467 323 PANTHER DNA-BINDING PROTEIN RAV1 1 293 - -
Cmo11g00467 323 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 293 IPR044800 GO:0003700
Cmo11g00467 323 Pfam AP2 domain 44 91 IPR001471 GO:0003700|GO:0006355
Cmo11g00467 323 ProSiteProfiles AP2/ERF domain profile. 45 100 IPR001471 GO:0003700|GO:0006355
Cmo11g00467 323 SUPERFAMILY DNA-binding domain 44 101 IPR016177 GO:0003677
Cmo11g00467 323 CDD AP2 44 102 IPR001471 GO:0003700|GO:0006355
Cmo11g00467 323 SMART B3_2 166 281 IPR003340 GO:0003677
Cmo11g00467 323 Pfam B3 DNA binding domain 166 267 IPR003340 GO:0003677
Cmo11g00467 323 CDD B3_DNA 165 277 IPR003340 GO:0003677
Cmo11g00467 323 SUPERFAMILY DNA-binding pseudobarrel domain 165 265 IPR015300 -
Cmo11g00467 323 Gene3D - 161 293 IPR015300 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00467 K09287 RAV; RAV-like factor - csv:101212246 543.502
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00467 Cmo-Chr11:2286432 Cmo11g00834 Cmo-Chr11:4237476 7.17E-103 dispersed
Cmo10g00510 Cmo-Chr10:2288074 Cmo11g00467 Cmo-Chr11:2286432 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo06g00500 CST 1 146 RAV Transcription Factor Family AT2G36080 63.1 1.6e-48 189.9
Cmo14g00327 . 1 157 RAV Transcription Factor Family AT2G36080 62.3 1.6e-48 189.9
Cmo17g00535 . 73 207 RAV Transcription Factor Family AT2G36080 62.1 1.7e-42 169.9
Cmo08g00001 . 75 193 RAV Transcription Factor Family AT2G36080 66.4 5.4e-41 164.9
Cmo04g00786 . 35 144 RAV Transcription Factor Family AT2G36080 70.8 1.0e-39 160.6
Cmo02g00966 . 48 157 RAV Transcription Factor Family AT2G36080 69.9 1.7e-39 159.8
Cmo16g00647 CST 12 118 RAV Transcription Factor Family AT2G36080 70.3 6.6e-39 157.9
Cmo18g01060 CCT,ECH 160 292 RAV Transcription Factor Family AT2G36080 58.6 3.3e-38 155.6
Cmo15g01401 . 27 135 RAV Transcription Factor Family AT2G36080 68.8 3.6e-37 152.1
Cmo04g01591 . 175 298 RAV Transcription Factor Family AT2G36080 60.0 8.1e-37 151.0
Cmo02g00966 . 48 164 RAV Transcription Factor Family AT2G46870 87.3 6.3e-56 215.3
Cmo17g00535 . 73 295 RAV Transcription Factor Family AT2G46870 54.2 3.4e-54 209.5
Cmo04g00786 . 35 145 RAV Transcription Factor Family AT2G46870 84.8 7.2e-52 201.8
Cmo08g00001 . 80 196 RAV Transcription Factor Family AT2G46870 79.8 2.1e-51 200.3
Cmo15g01401 . 27 146 RAV Transcription Factor Family AT2G46870 81.0 2.1e-51 200.3
Cmo16g00647 CST 12 128 RAV Transcription Factor Family AT2G46870 76.2 1.3e-48 191.0
Cmo04g01591 . 177 289 RAV Transcription Factor Family AT2G46870 68.1 2.4e-39 160.2
Cmo06g00500 CST 35 163 RAV Transcription Factor Family AT2G46870 60.6 9.1e-39 158.3
Cmo18g01060 CCT,ECH 166 275 RAV Transcription Factor Family AT2G46870 67.3 2.0e-38 157.1
Cmo04g02102 . 164 277 RAV Transcription Factor Family AT2G46870 65.8 1.0e-37 154.8
Cmo14g00327 . 37 153 RAV Transcription Factor Family AT2G46870 64.2 2.2e-37 153.7
Cmo06g00500 CST 1 150 RAV Transcription Factor Family AT3G11580 57.9 1.3e-45 180.6
Cmo14g00327 . 37 164 RAV Transcription Factor Family AT3G11580 63.4 2.2e-42 169.9
Cmo08g00001 . 66 203 RAV Transcription Factor Family AT3G11580 57.7 5.5e-41 165.2
Cmo17g00535 . 69 202 RAV Transcription Factor Family AT3G11580 57.2 4.7e-40 162.2
Cmo02g00966 . 48 159 RAV Transcription Factor Family AT3G11580 63.4 5.2e-39 158.7
Cmo16g00647 CST 6 118 RAV Transcription Factor Family AT3G11580 61.6 5.7e-38 155.2
Cmo04g00786 . 35 144 RAV Transcription Factor Family AT3G11580 62.0 2.2e-37 153.3
Cmo02g00966 . 23 164 RAV Transcription Factor Family AT3G61970 70.3 1.2e-51 201.1
Cmo04g00786 . 27 165 RAV Transcription Factor Family AT3G61970 68.3 3.2e-49 193.0
Cmo08g00001 . 78 189 RAV Transcription Factor Family AT3G61970 82.6 4.2e-49 192.6
Cmo15g01401 . 7 155 RAV Transcription Factor Family AT3G61970 66.4 4.2e-49 192.6
Cmo17g00535 . 74 188 RAV Transcription Factor Family AT3G61970 79.8 9.3e-49 191.4
Cmo16g00647 CST 1 119 RAV Transcription Factor Family AT3G61970 76.4 1.2e-48 191.0
Cmo04g01591 . 177 289 RAV Transcription Factor Family AT3G61970 68.4 1.4e-39 161.0
Cmo18g01060 CCT,ECH 166 275 RAV Transcription Factor Family AT3G61970 67.3 5.7e-38 155.6
Cmo04g02102 . 163 277 RAV Transcription Factor Family AT3G61970 65.8 9.7e-38 154.8
Cmo02g00966 . 49 164 RAV Transcription Factor Family AT4G01500 67.5 7.2e-42 168.7
Cmo08g00001 . 71 196 RAV Transcription Factor Family AT4G01500 64.2 2.1e-41 167.2
Cmo15g01401 . 8 146 RAV Transcription Factor Family AT4G01500 59.1 8.8e-40 161.8
Cmo16g00647 CST 13 118 RAV Transcription Factor Family AT4G01500 67.2 7.5e-39 158.7
Cmo04g00786 . 36 163 RAV Transcription Factor Family AT4G01500 60.6 9.7e-39 158.3
Cmo14g00327 . 32 230 RAV Transcription Factor Family AT5G06250 55.6 2.5e-53 206.5
Cmo06g00500 CST 27 235 RAV Transcription Factor Family AT5G06250 52.0 3.1e-51 199.5
Cmo17g00535 . 76 184 RAV Transcription Factor Family AT5G06250 66.4 5.4e-40 162.2
Cmo08g00001 . 81 189 RAV Transcription Factor Family AT5G06250 66.4 7.1e-40 161.8
Cmo04g00786 . 36 144 RAV Transcription Factor Family AT5G06250 67.2 1.2e-39 161.0
Cmo02g00966 . 49 157 RAV Transcription Factor Family AT5G06250 66.4 1.6e-39 160.6
Cmo16g00647 CST 13 118 RAV Transcription Factor Family AT5G06250 68.4 2.1e-39 160.2
Cmo18g01060 CCT,ECH 163 288 RAV Transcription Factor Family AT5G06250 59.6 1.3e-38 157.5
Cmo04g01591 . 172 285 RAV Transcription Factor Family AT5G06250 61.5 1.5e-37 154.1
Cmo15g01401 . 28 135 RAV Transcription Factor Family AT5G06250 64.4 5.6e-37 152.1
Cmo11g00467 . 45 323 RAV Transcription Factor Family AT1G50680 54.3 5.0e-83 305.4
Cmo10g00510 . 41 333 RAV Transcription Factor Family AT1G50680 52.1 1.8e-80 297.0
Cmo11g00834 CCT,ECH 52 279 RAV Transcription Factor Family AT1G50680 59.5 2.7e-76 283.1
Cmo11g00467 . 37 323 RAV Transcription Factor Family AT1G51120 52.2 1.5e-82 303.9
Cmo10g00510 . 37 333 RAV Transcription Factor Family AT1G51120 51.6 2.7e-79 293.1
Cmo11g00834 CCT,ECH 52 284 RAV Transcription Factor Family AT1G51120 59.2 6.0e-79 292.0
Cmo04g01591 . 30 341 RAV Transcription Factor Family AT1G13260 67.3 6.0e-108 388.3
Cmo18g01060 CCT,ECH 16 333 RAV Transcription Factor Family AT1G13260 63.0 5.1e-99 358.6
Cmo15g01051 CCT,ECH 36 323 RAV Transcription Factor Family AT1G13260 64.0 5.3e-96 348.6
Cmo04g02102 . 37 324 RAV Transcription Factor Family AT1G13260 62.8 6.2e-89 325.1
Cmo06g00500 CST 35 155 RAV Transcription Factor Family AT1G13260 64.5 5.0e-38 156.0
Cmo02g00966 . 50 177 RAV Transcription Factor Family AT1G13260 62.8 8.5e-38 155.2
Cmo08g00001 . 82 190 RAV Transcription Factor Family AT1G13260 70.0 1.5e-37 154.5
Cmo17g00535 . 72 184 RAV Transcription Factor Family AT1G13260 68.4 1.5e-37 154.5
Cmo14g00327 . 24 154 RAV Transcription Factor Family AT1G13260 59.5 2.7e-36 150.2
Cmo04g01591 . 20 308 RAV Transcription Factor Family AT3G25730 66.2 3.2e-98 355.9
Cmo18g01060 CCT,ECH 15 300 RAV Transcription Factor Family AT3G25730 64.5 4.5e-92 335.5
Cmo15g01051 CCT,ECH 36 289 RAV Transcription Factor Family AT3G25730 66.3 1.3e-88 323.9
Cmo04g02102 . 22 322 RAV Transcription Factor Family AT3G25730 58.2 3.7e-86 315.8
Cmo06g00500 CST 35 155 RAV Transcription Factor Family AT3G25730 63.1 2.8e-38 156.8
Cmo04g01591 . 1 342 RAV Transcription Factor Family AT1G68840 61.6 2.7e-111 399.4
Cmo18g01060 CCT,ECH 10 334 RAV Transcription Factor Family AT1G68840 62.9 2.8e-105 379.4
Cmo15g01051 CCT,ECH 1 324 RAV Transcription Factor Family AT1G68840 56.9 1.1e-93 340.9
Cmo04g02102 . 37 325 RAV Transcription Factor Family AT1G68840 61.2 4.7e-92 335.5
Cmo08g00001 . 58 190 RAV Transcription Factor Family AT1G68840 58.7 3.5e-39 159.8
Cmo17g00535 . 76 184 RAV Transcription Factor Family AT1G68840 70.3 1.8e-38 157.5
Cmo02g00966 . 49 157 RAV Transcription Factor Family AT1G68840 70.3 6.7e-38 155.6
Cmo06g00500 CST 35 155 RAV Transcription Factor Family AT1G68840 62.8 8.7e-38 155.2
Cmo04g00786 . 11 154 RAV Transcription Factor Family AT1G68840 54.8 5.7e-37 152.5
Cmo14g00327 . 37 167 RAV Transcription Factor Family AT1G68840 60.2 1.3e-36 151.4
Cmo16g00647 CST 4 118 RAV Transcription Factor Family AT1G68840 64.4 1.6e-36 151.0
Cmo04g01591 . 20 308 RAV Transcription Factor Family AT3G25730 66.2 3.2e-98 355.9
Cmo18g01060 CCT,ECH 15 300 RAV Transcription Factor Family AT3G25730 64.5 4.5e-92 335.5
Cmo15g01051 CCT,ECH 36 289 RAV Transcription Factor Family AT3G25730 66.3 1.3e-88 323.9
Cmo04g02102 . 22 322 RAV Transcription Factor Family AT3G25730 58.2 3.7e-86 315.8
Cmo06g00500 CST 35 155 RAV Transcription Factor Family AT3G25730 63.1 2.8e-38 156.8
Cmo11g00467 . 37 323 RAV Transcription Factor Family AT1G51120 52.2 1.5e-82 303.9
Cmo10g00510 . 37 333 RAV Transcription Factor Family AT1G51120 51.6 2.7e-79 293.1
Cmo11g00834 CCT,ECH 52 284 RAV Transcription Factor Family AT1G51120 59.2 6.0e-79 292.0
Cmo06g00500 CST 1 150 RAV Transcription Factor Family AT3G11580 57.9 1.3e-45 180.6
Cmo14g00327 . 37 164 RAV Transcription Factor Family AT3G11580 63.4 2.2e-42 169.9
Cmo08g00001 . 66 203 RAV Transcription Factor Family AT3G11580 57.7 5.5e-41 165.2
Cmo17g00535 . 69 202 RAV Transcription Factor Family AT3G11580 57.2 4.7e-40 162.2
Cmo02g00966 . 48 159 RAV Transcription Factor Family AT3G11580 63.4 5.2e-39 158.7
Cmo16g00647 CST 6 118 RAV Transcription Factor Family AT3G11580 61.6 5.7e-38 155.2
Cmo04g00786 . 35 144 RAV Transcription Factor Family AT3G11580 62.0 2.2e-37 153.3
Cmo02g00966 . 49 164 RAV Transcription Factor Family AT4G01500 67.5 7.2e-42 168.7
Cmo08g00001 . 71 196 RAV Transcription Factor Family AT4G01500 64.2 2.1e-41 167.2
Cmo15g01401 . 8 146 RAV Transcription Factor Family AT4G01500 59.1 8.8e-40 161.8
Cmo16g00647 CST 13 118 RAV Transcription Factor Family AT4G01500 67.2 7.5e-39 158.7
Cmo04g00786 . 36 163 RAV Transcription Factor Family AT4G01500 60.6 9.7e-39 158.3
Cmo06g00500 CST 1 146 RAV Transcription Factor Family AT2G36080 63.1 1.6e-48 189.9
Cmo14g00327 . 1 157 RAV Transcription Factor Family AT2G36080 62.3 1.6e-48 189.9
Cmo17g00535 . 73 207 RAV Transcription Factor Family AT2G36080 62.1 1.7e-42 169.9
Cmo08g00001 . 75 193 RAV Transcription Factor Family AT2G36080 66.4 5.4e-41 164.9
Cmo04g00786 . 35 144 RAV Transcription Factor Family AT2G36080 70.8 1.0e-39 160.6
Cmo02g00966 . 48 157 RAV Transcription Factor Family AT2G36080 69.9 1.7e-39 159.8
Cmo16g00647 CST 12 118 RAV Transcription Factor Family AT2G36080 70.3 6.6e-39 157.9
Cmo18g01060 CCT,ECH 160 292 RAV Transcription Factor Family AT2G36080 58.6 3.3e-38 155.6
Cmo15g01401 . 27 135 RAV Transcription Factor Family AT2G36080 68.8 3.6e-37 152.1
Cmo04g01591 . 175 298 RAV Transcription Factor Family AT2G36080 60.0 8.1e-37 151.0
Cmo14g00327 . 32 230 RAV Transcription Factor Family AT5G06250 55.6 2.5e-53 206.5
Cmo06g00500 CST 27 235 RAV Transcription Factor Family AT5G06250 52.0 3.1e-51 199.5
Cmo17g00535 . 76 184 RAV Transcription Factor Family AT5G06250 66.4 5.4e-40 162.2
Cmo08g00001 . 81 189 RAV Transcription Factor Family AT5G06250 66.4 7.1e-40 161.8
Cmo04g00786 . 36 144 RAV Transcription Factor Family AT5G06250 67.2 1.2e-39 161.0
Cmo02g00966 . 49 157 RAV Transcription Factor Family AT5G06250 66.4 1.6e-39 160.6
Cmo16g00647 CST 13 118 RAV Transcription Factor Family AT5G06250 68.4 2.1e-39 160.2
Cmo18g01060 CCT,ECH 163 288 RAV Transcription Factor Family AT5G06250 59.6 1.3e-38 157.5
Cmo04g01591 . 172 285 RAV Transcription Factor Family AT5G06250 61.5 1.5e-37 154.1
Cmo15g01401 . 28 135 RAV Transcription Factor Family AT5G06250 64.4 5.6e-37 152.1
Cmo02g00966 . 48 164 RAV Transcription Factor Family AT2G46870 87.3 6.3e-56 215.3
Cmo17g00535 . 73 295 RAV Transcription Factor Family AT2G46870 54.2 3.4e-54 209.5
Cmo04g00786 . 35 145 RAV Transcription Factor Family AT2G46870 84.8 7.2e-52 201.8
Cmo08g00001 . 80 196 RAV Transcription Factor Family AT2G46870 79.8 2.1e-51 200.3
Cmo15g01401 . 27 146 RAV Transcription Factor Family AT2G46870 81.0 2.1e-51 200.3
Cmo16g00647 CST 12 128 RAV Transcription Factor Family AT2G46870 76.2 1.3e-48 191.0
Cmo04g01591 . 177 289 RAV Transcription Factor Family AT2G46870 68.1 2.4e-39 160.2
Cmo06g00500 CST 35 163 RAV Transcription Factor Family AT2G46870 60.6 9.1e-39 158.3
Cmo18g01060 CCT,ECH 166 275 RAV Transcription Factor Family AT2G46870 67.3 2.0e-38 157.1
Cmo04g02102 . 164 277 RAV Transcription Factor Family AT2G46870 65.8 1.0e-37 154.8
Cmo14g00327 . 37 153 RAV Transcription Factor Family AT2G46870 64.2 2.2e-37 153.7
Cmo11g00467 . 45 323 RAV Transcription Factor Family AT1G50680 54.3 5.0e-83 305.4
Cmo10g00510 . 41 333 RAV Transcription Factor Family AT1G50680 52.1 1.8e-80 297.0
Cmo11g00834 CCT,ECH 52 279 RAV Transcription Factor Family AT1G50680 59.5 2.7e-76 283.1
Cmo02g00966 . 23 164 RAV Transcription Factor Family AT3G61970 70.3 1.2e-51 201.1
Cmo04g00786 . 27 165 RAV Transcription Factor Family AT3G61970 68.3 3.2e-49 193.0
Cmo08g00001 . 78 189 RAV Transcription Factor Family AT3G61970 82.6 4.2e-49 192.6
Cmo15g01401 . 7 155 RAV Transcription Factor Family AT3G61970 66.4 4.2e-49 192.6
Cmo17g00535 . 74 188 RAV Transcription Factor Family AT3G61970 79.8 9.3e-49 191.4
Cmo16g00647 CST 1 119 RAV Transcription Factor Family AT3G61970 76.4 1.2e-48 191.0
Cmo04g01591 . 177 289 RAV Transcription Factor Family AT3G61970 68.4 1.4e-39 161.0
Cmo18g01060 CCT,ECH 166 275 RAV Transcription Factor Family AT3G61970 67.3 5.7e-38 155.6
Cmo04g02102 . 163 277 RAV Transcription Factor Family AT3G61970 65.8 9.7e-38 154.8
Cmo04g01591 . 30 341 RAV Transcription Factor Family AT1G13260 67.3 6.0e-108 388.3
Cmo18g01060 CCT,ECH 16 333 RAV Transcription Factor Family AT1G13260 63.0 5.1e-99 358.6
Cmo15g01051 CCT,ECH 36 323 RAV Transcription Factor Family AT1G13260 64.0 5.3e-96 348.6
Cmo04g02102 . 37 324 RAV Transcription Factor Family AT1G13260 62.8 6.2e-89 325.1
Cmo06g00500 CST 35 155 RAV Transcription Factor Family AT1G13260 64.5 5.0e-38 156.0
Cmo02g00966 . 50 177 RAV Transcription Factor Family AT1G13260 62.8 8.5e-38 155.2
Cmo08g00001 . 82 190 RAV Transcription Factor Family AT1G13260 70.0 1.5e-37 154.5
Cmo17g00535 . 72 184 RAV Transcription Factor Family AT1G13260 68.4 1.5e-37 154.5
Cmo14g00327 . 24 154 RAV Transcription Factor Family AT1G13260 59.5 2.7e-36 150.2
Cmo04g01591 . 1 342 RAV Transcription Factor Family AT1G68840 61.6 2.7e-111 399.4
Cmo18g01060 CCT,ECH 10 334 RAV Transcription Factor Family AT1G68840 62.9 2.8e-105 379.4
Cmo15g01051 CCT,ECH 1 324 RAV Transcription Factor Family AT1G68840 56.9 1.1e-93 340.9
Cmo04g02102 . 37 325 RAV Transcription Factor Family AT1G68840 61.2 4.7e-92 335.5
Cmo08g00001 . 58 190 RAV Transcription Factor Family AT1G68840 58.7 3.5e-39 159.8
Cmo17g00535 . 76 184 RAV Transcription Factor Family AT1G68840 70.3 1.8e-38 157.5
Cmo02g00966 . 49 157 RAV Transcription Factor Family AT1G68840 70.3 6.7e-38 155.6
Cmo06g00500 CST 35 155 RAV Transcription Factor Family AT1G68840 62.8 8.7e-38 155.2
Cmo04g00786 . 11 154 RAV Transcription Factor Family AT1G68840 54.8 5.7e-37 152.5
Cmo14g00327 . 37 167 RAV Transcription Factor Family AT1G68840 60.2 1.3e-36 151.4
Cmo16g00647 CST 4 118 RAV Transcription Factor Family AT1G68840 64.4 1.6e-36 151.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002261 1 6 1 2 2 2 3 2 1 2 2 2 3 2 1 3 2 2 3 2 2 2 2 2 2 2 2 3 1 1 63
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10553 PF02362 B3 5.60E-25 CL0405 Cmo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo11g00467 Cmo_Chr11 FPKM 13.003539 14.355018 10.838744 12.343243 3.391879 2.905551 3.837287 17.972548 17.05361 17.326639