Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00507 | ATGAGTGTTACCATTCTTCCAGATCTCGGGACTGAGATTTTCATTCCGGTATGTGCCGTTGTTGGAATCGTCTTCTCTTTGGTGCAGTGGTATTATGTTTCGCAGGTTAAGCTCTCGCCTGGCCGAGATGCCGCTCACAACAACAGCGCCGGTTCTAAGAATGGCTACTCCGACTACCTCATCGAGGAGGAAGAGGGCGTCAACGACCATAACGTTGTGATTAAGTGTGCCGAAATTCAGAGTGCCATTTCTGAGGGAGCAACGTCCTTCCTTTTCACGGAGTACAAGTACGTTGGCATCTTTATGGTGCTGTTTGCAGTCTTGATTTTCGTATTCCTTGGCTCAGTTGAGAGTTTTAGTACCAAGCCTCAACCGTGCACATATGACAAAACAAGGACTTGTAAGCCAGCTTTGGCGACTGCTATATTTAGCACTGTATCATTTTTACTTGGTGCAGTTACTTCAGTGGTTTCTGGTTTCCTTGGAATGAAAATTGCTACATACGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTTCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACCTCTTCAAATTGTACTATGGTGATGATTGGGGTGGTCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGTTCTTCCATGGCTCTCTTTGGAAGAGTTGGTGGTGGTATCTACACCAAAGCTGCCGATGTTGGTGCTGACCTTGTGGGCAAGGTGGAAAGGAACATCCCCGAGGATGATCCCAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGGGATATAGCCGGTATGGGATCTGATCTGTTTGGTTCATATGCTGAATCTTCATGTGCTGCTCTCGTTGTTGCTTCTATCTCTTCTTTTGGCAACAACCATGAATTGACACCAATGCTCTACCCTCTCATCGTTAGTTCTATGGGTATTCTTGTTTGCCTGATCACCACCTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTTATAATTTCCACTGTTCTAATGACCTTTGGAATTGCAATTGTTACTTGGTTGTCTGTTCCATCATCATTCACCATTTTCAACTTTGGAACTCAAAAAGTTGTTACGAACTGGAAACTGTTCTTGTGCGTTGCTGTGGGTCTCTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTACTATACGAGCAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTTATTTTTGGGTTGGCGTTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCGGTCAGTATTTTTGTGAGTTTCACCTTTGCTGCCATGTACGGTATTGCTGTAGCTGCCCTTGGAATGCTGAGTACCATAGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCTGAGATGGCAGGCATGAGCCACAGAATTCGGGAGAGAACTGATGCCCTCGATGCTGCTGGAAACACCACTGCAGCCATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCCCTTGTGTCCCTTGCTCTTTTCGGTGCCTTTGTCAGCCGTGCCGGTGTCACTGCTGTTGACGTCTTGACTCCCAAAGTTTTTATTGGTTTGATTGTGGGTGCCATGCTCCCCTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGTAGTGCAGCCCTAAAGATGGTTGAGGAGGTGCGAAGGCAGTTCAACACTATCCCAGGTCTCATGGAGGGTACTGCCAAGCCCGACTACGCTACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCTGGTGCTCTTGTCATGTTGACACCACTAATTGTTGGTATCCTTTTTGGAGTTGAAACTCTTTCTGGTGTCCTTGCTGGGTCCCTTGTTTCTGGTGTGCAGATTGCCATTTCTGCATCTAACACCGGAGGTGCCTGGGATAACGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCACGCAAGAACCCTTGGCCCGAAAGGATCAGACCCACACAAAGCCGCTGTTATCGGTGACACAATCGGAGACCCGCTGAAGGATACATCCGGACCATCTTTGAACATTCTGATCAAGTTGATGGCTGTCGAGTCCCTTGTGTTTGCTCCTTTCTTTGCCAGTCACGGTGGTCTTCTCTTCAAGATCTTCTGA | 2307 | 46.55 | MSVTILPDLGTEIFIPVCAVVGIVFSLVQWYYVSQVKLSPGRDAAHNNSAGSKNGYSDYLIEEEEGVNDHNVVIKCAEIQSAISEGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVESFSTKPQPCTYDKTRTCKPALATAIFSTVSFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLSVPSSFTIFNFGTQKVVTNWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTAVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGGLLFKIF | 768 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2436611 | 2441349 | - | CmoCh11G005070.1 | Cmo11g00507 | 391126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00507 | 768 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 9 | 758 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Cmo11g00507 | 768 | PANTHER | PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP | 1 | 767 | - | - | |
Cmo11g00507 | 768 | PIRSF | H+-PPtase | 11 | 766 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Cmo11g00507 | 768 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 1 | 767 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Cmo11g00507 | 768 | Pfam | Inorganic H+ pyrophosphatase | 23 | 753 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 | |
Cmo11g00507 | 768 | TIGRFAM | V_PPase: V-type H(+)-translocating pyrophosphatase | 11 | 763 | IPR004131 | GO:0004427|GO:0009678|GO:0016020|GO:1902600 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00547 | Cmo11g00507 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo12g01043 | Cmo-Chr12:9690983 | Cmo11g00507 | Cmo-Chr11:2436611 | 5.05E-117 | transposed | |
Cmo17g00604 | Cmo-Chr17:6402349 | Cmo11g00507 | Cmo-Chr11:2436611 | 1.99E-23 | transposed | |
Cmo10g00547 | Cmo-Chr10:2457275 | Cmo11g00507 | Cmo-Chr11:2436611 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00507 | K23025 | - | csv:101222673 | 1430.23 |