Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00545 | ATGTTTCCCCCACTGCCCCTTCTCTCTGTACTTCCTTCTCTGACAATGCCCAAGTTTAAGAAGTTTCGTGGTGTTAGGCAGCGCCATTGGGGCTCTTGGGTTTCTGAAATTCGCCATCCATTACTGAAGAGGCGGATTTGGTTGGGGACGTTTGAGACGGCGGAGGAAGCGGCAAGAGCGTATGATCAAGCTGCGATTTTGATGAGCGGACGTAATGCCAAAACCAATTTCCCGACGACCCATGACACCAACATTACTACAACCAAGGATTCCCCCAAGGGGTTGTCTGAAATATTGCAAGCTAAGCTCAAGAAATGCTGTCGGACTCCATCGCCTTCCATGACATGTTTGAGGCTCGACACTGAGAATTCCAACATTGGCGTGTGGCAGAAACGTGCTGGGCCACGGTCGGCATCTAGCTGGGTCATGACTGTTGAGCTTGGAAATAAGAAGAGCCATAACAACGAGGATGATTCTCTGATGGGTGTGGTTGTGGCTGATCAGTCCCCGGTGGCGGCGGAAGTGGCGGAGATTCCATCGGAGTTGGATGAAGAAGAGAGAATGGTGGCTTTGCAAATGGTGGAGGAACTGCTTCATATCAGCTATGATGAACCAAACGAATTGTTTGAGATTCAACAGGGGAAGGATGTTTATCTTTAG | 660 | 49.55 | MFPPLPLLSVLPSLTMPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDQAAILMSGRNAKTNFPTTHDTNITTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVWQKRAGPRSASSWVMTVELGNKKSHNNEDDSLMGVVVADQSPVAAEVAEIPSELDEEERMVALQMVEELLHISYDEPNELFEIQQGKDVYL | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2650406 | 2651144 | + | CmoCh11G005450.1 | Cmo11g00545 | 391164 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00545 | 219 | Pfam | AP2 domain | 21 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
Cmo11g00545 | 219 | ProSiteProfiles | AP2/ERF domain profile. | 21 | 78 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g00588 | Cmo-Chr8:3585257 | Cmo11g00545 | Cmo-Chr11:2650406 | 2.07E-31 | dispersed | |
Cmo11g00545 | Cmo-Chr11:2650406 | Cmo12g00308 | Cmo-Chr12:1914204 | 2.06E-32 | dispersed | |
Cmo01g01559 | Cmo-Chr1:11988840 | Cmo11g00545 | Cmo-Chr11:2650406 | 5.02E-70 | wgd | |
Cmo11g00545 | Cmo-Chr11:2650406 | Cmo09g00470 | Cmo-Chr9:2110532 | 6.18E-71 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10558 | PF00847 | AP2 | 1.40E-12 | CL0081 | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00545 | - | - | bhj:120071615 | 308.145 |