Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00595 ATGGGTTCGTTGAAAAGTGAACAACATGTGAACTTTGCTGCTCCAAGACCATTCGTGAAGAGGCTGAAATCAGATCTGAAAGAGACGTTTTATCCCGATGATCCCTTCAGGCAGTTTCGTGGTGATAGGCGAACGCACCAACTCAAAAAGGCCGTCCAGTATTTCATCCCCATATTGGAATGGCTTCCTAAATACAATTTTAATATGTTTAAGTATGATTTGCTCGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCTAAGCTTGGCAGCCTCCCTCCCATCATCGGCCTTTATTCCAGCTTCGTTCCACCGCTTGTGTATGCGGTGTTTGGAAGCTCGAAGCATCTGGCGGTGGGTACGGTGGCGGCATGTTCGTTGCTAATAGCGGAAATCATCGGAGAAGTGGCGTCGCCGGAAGAAGACCCCACATTGTATCTACACCTGGTTTTAACAGCCACCTTAATCACCGGCGTCATGCAGACGGCCTTAGGGATTCTACGATTGGGAATCTTGGTGGATTTCTTATCGCATTCGACGATCATAGGGTTTATGGGAGGAACAGCTGTGATCATTTGCCTGCAACAGCTGAAAGGCATATTCGGACTCACTCATTTCACCTCTAAAACCGACGTCTATTCGGTACTCCATGCCGTTTTCTCCCTTAGACATGAGTGGAGATGGCAAAGTGCTGTCACGGGCGTCGTCTTCCTTGTCTTCCTCCAGTTTACTAGGTACCTGAGAGATAGAAACCCGAAGCTGTTTTGGGTATCAGCGATGGCTCCGATGGTGACAGTGATAGTCGGGTGTTTGGTTGCATATCTCGTCCATGGAAGTCAGCATGGAATCTTAACTGTGGGTCGCTTGAACAAAGGAATAAACCCTCCTTCTATTCACTCCTTGAACTTTGACCCAAAATATCTACCAGCTGTGGTACAAGCTGGTGCCATCACTGGCCTTGTGGCTTTGGCTGAAGGAATAGCGATTGGTCGAAGCTTTGCAATAATGAAAAACGAACAAGTCGATGGCAACAAAGAGATGGTAGCCTTTGGTTTGATGAACATTGTGGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAATGCTGGATGTAGAACAGCAATGTCAAACGTAGTAATGGCGGTCTTCATGGCTCTCACGCTCCTCTTTCTAGCTCCTCTCTTCAGCTACACTCCTCTTGTAGCCCTTTCCGCCATTATTATGTCCGCCATGTTTGGTTTGATCAAATACGAAGAAATATATCATCTTTTCAAGGTCGACAAGTTCGATTTCTGCATTTGTATGGCTGCTTTCTTGGGCGTTGCTCTATTGAGCATGGATGTTGGCTTAATGCTTTCGGTGGGTCTTGCTTTGCTGAGAGCTCTTCTTTACATGGCTAGACCAGCAACTTGCAAGCTTGAGAAAATACCAGACACTGATTTGTACAGAGACGTGGAGCAGTATCCTAATGCAATGAGAGTCCCTGGAGTCATTGTTCTTCAACTTGGTTCCCCTATTTATTATGCCAACTCCAACTACATCAGAGAAAGGATTTTGAGATGGGTTCGTGATGAGCATGCCAAGTTCGATTCCGTAGATGGATCCGTCCAGCATGTACTGCTGGAATTGAGTGGAGTTACATCAATCGACATGACAGGGATTGAAACACTAATCGAAATTCGCAGATTGTTGCAAGCGAACGGAGTTAAGATGGGAATTGTAAACCCAAGAATCGTAGTGATGGAGAAGATGATAGCATCAGAATTCACAAACACGATCGGGAAAGAAAACATCTATTTGTCAGTAGACGATGGAGTGGAAAGGTGCAGAGATTTGGCGTACAACCCACAGAAAACAAATCCAAGTGATGATAACGTGGAATTGAGCGCAGTGGAGCTGCGGGTATAA 1950 46.1 MGSLKSEQHVNFAAPRPFVKRLKSDLKETFYPDDPFRQFRGDRRTHQLKKAVQYFIPILEWLPKYNFNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIAEIIGEVASPEEDPTLYLHLVLTATLITGVMQTALGILRLGILVDFLSHSTIIGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVFSLRHEWRWQSAVTGVVFLVFLQFTRYLRDRNPKLFWVSAMAPMVTVIVGCLVAYLVHGSQHGILTVGRLNKGINPPSIHSLNFDPKYLPAVVQAGAITGLVALAEGIAIGRSFAIMKNEQVDGNKEMVAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNVVMAVFMALTLLFLAPLFSYTPLVALSAIIMSAMFGLIKYEEIYHLFKVDKFDFCICMAAFLGVALLSMDVGLMLSVGLALLRALLYMARPATCKLEKIPDTDLYRDVEQYPNAMRVPGVIVLQLGSPIYYANSNYIRERILRWVRDEHAKFDSVDGSVQHVLLELSGVTSIDMTGIETLIEIRRLLQANGVKMGIVNPRIVVMEKMIASEFTNTIGKENIYLSVDDGVERCRDLAYNPQKTNPSDDNVELSAVELRV 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2867566 2870755 + CmoCh11G005950.1 Cmo11g00595 391214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00595 649 PANTHER SULFATE TRANSPORTER 5 625 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cmo11g00595 649 PANTHER SULFATE TRANSPORTER 3.5-RELATED 5 625 IPR030316 GO:1902358
Cmo11g00595 649 TIGRFAM sulP: sulfate permease 57 618 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cmo11g00595 649 CDD STAS_SulP_like_sulfate_transporter 502 616 - -
Cmo11g00595 649 Pfam STAS domain 502 618 IPR002645 -
Cmo11g00595 649 Gene3D STAS domain 481 626 IPR036513 -
Cmo11g00595 649 SUPERFAMILY SpoIIaa-like 503 624 IPR036513 -
Cmo11g00595 649 Pfam Sulfate permease family 70 451 IPR011547 GO:0016021
Cmo11g00595 649 ProSiteProfiles STAS domain profile. 501 623 IPR002645 -
Cmo11g00595 649 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00595 Cmo-Chr11:2867566 Cmo17g01178 Cmo-Chr17:9479063 0 dispersed
Cmo14g01779 Cmo-Chr14:13719051 Cmo11g00595 Cmo-Chr11:2867566 6.94E-175 dispersed
Cmo10g00643 Cmo-Chr10:2947910 Cmo11g00595 Cmo-Chr11:2867566 0 wgd
Cmo11g00595 Cmo-Chr11:2867566 Cmo17g00784 Cmo-Chr17:7547412 0 wgd
Cmo11g00595 Cmo-Chr11:2867566 Cmo08g00647 Cmo-Chr8:4222627 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00595 K17471 - csv:116402148 1046.96