Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00596 ATGAATTTCAACTCCATTTTAAACCTCTCACTCCTCCTCCTTCTCCTCCGCCTCGCCGCCGCCACCGTCGGCCATGGCTCCCTCTCTGACGCCGAAGCTCTCTATATCCGGCAGCGTCAGCTTCTGTACTATCGAGATGAGTTCGGCGACCGTGGCGAGGAAGTTACCGTCGACCCATCTCTCGTTTTCGAAAACGAAAGGATCAGAAACGCCTACATTGCACTTCAAGCTTGGAAACTCGCCATTTTGTCCGACCCACTGAAGCAAACAGCTAATTGGGTCGGATCTGATGTCTGCACCTACACCGGCGTTTACTGTGCTCCCGCATTGGACAACCCCAACATTCGTACTGTCGCCGGCATCGATCTCAATCACGGCGACATTGCCGGATACCTCCCCGAGGAGCTCGGTTTGCTTGTGGATCTAGCATTGTTCCACATCAACTCCAACAGATTCTGCGGCACTGTTCCTCACAAATTCGACCGTCTCAAGTTGCTTTATGAGTTGGATCTCAGTAATAATCGGTTCGCCGGGAGGTTTCCCGATGTGGTTCTCAGGCTTCCGATTCTCAAGTTTTTGGATCTGAGGTTTAACGAATTTGAAGGCAGTGTACCCAGAGAGCTGTTTGATAAGGATTTAGACGCCATTTTTATTAACCATAATCGGTTTAGATTCGAACTGCCGGATAATTTTGGGAACTCGCCGGTGTCGGTGATTGTTGTGGCCAACAATAACTTCCATGGGTGTTTGCCTAAGAGCTTGGGCAACATGACGAGGCTGAATGAGATCATTATGATGAACAATGGACTAAATTCTTGCTTGCCGCCGGTAATTGGGGCGTTGAAGAACTTGACAGTGTTCGATGTTAGTTCAAATCAGTTGGTGGGGCCATTGCCGGAGACCTTTGGAGGGCTTGTGAGTTTGGAGCAACTCAATGTAGCTAATAATTTTCTTTCTGGGAAGATTCCGGGGAGTATTTGTGATTTGCCCAAGCTTCAGAACTTTACGTTCTCGAATAACTTCTTTTCCGGTGAGCCGCCGGAGTGTTTGAGGGTTCCGGAGTTCAGTGATCGGAGGAATTGCTTACCGGGACGGCCAATGCAGCGGCCAAGTGGGAAATGTAACTCGTTTTTGTCGAACCCTGTTGATTGTAATGCGTTTAAATGCGGTGGTTCTTCGTCTGTTACGCCTTCTTCTCCGTTTTCCCCTCCGGCTGTTTCGCCCTCTTCGCCTCCATCACCGGTGGCGCCGTCGTCACCTCCGTCTTTCCCGTCACCAGTGGCGCCATCATCACCTCCGTCGCCGTCTCAGTCTCCGAGTACACCGACGGAACCGCCATTGTCGCCCCATTTTCCTCCACTATCGCCACCGCCGTCGCCTTCATCTCCGACTACACCTACAACTCCCTCATCGCCGCCTCATTTTCCATCTCCATCTGCTCCGTCGCCTTCATCTCCGACTACACCTACAACCCCCTCATCGCCACCTCATTTTCCATCTCCATCTGCGCCGTCACCTTCATCACCGCATCAAGGTCCTTCTCCGCCGTCACTACCCTCACCTTCCTCGCCGCCTCTAGGTCATACTCCGCCATCTGAGCCCACACAACCATCGCCACCTCACAGTCATACCCCGCCTACTCCACCTTCACCAACCAAGCCCTCGCCATCATTACCGCCACAAGGCCACACTCCCCCTGGTCCTTCGCCGTCCGAGCCCTCACCATCATCGCCACCACAAGCCCATACTCCGCAATCTCCACCTTCACCGACCGAGCCCTCTCCTTCCTCGCCGCCATATGGCCACATTTCCCCGGCTGAGCCTTCTCCACCTGGAATATCAGCACCGCCATTCCCAGTTCACACTCCGCCTCCACCACATTTCCCTGATTTTCCTTCGCCGCCAAATACCCAACCTCCAGTCTACTGCCCACGATCCCCATATCCACCATCCCCTCCATCCTACTCCCCAAACCCACCTGATTCTCACTTCACCTCCCCCCCGCCGCCGCCACCTGTTTATTCCCCACCCCCTGTTCATACATCGCCGTCCCCTCTCCCCTGCACAAAACCTCCATCTCCCCCACCAGGTGCTCACTATTCAGAACCACCGCCTCCTCAGTCTTCAACACCGTCTTCCCCGATCCACTACAACTCCCCACCACCACCACCACCACCACCACCGGGGCAATATCAATCTCCTCCCTCACCTTCACCTCCGGTCAGCGTGTATCCACCGCTATCTCCCTCACCCCCACCTCCAGTGATTTACGAAAGCCCGCCGCCGCCTCCAACTCCAGTATACGGTGGCCCACTGCCTCCAATCTACGGAGTTCCCTACGCCTCTCCTCCACCCCCACCCTTCTATTAA 2370 54.39 MNFNSILNLSLLLLLLRLAAATVGHGSLSDAEALYIRQRQLLYYRDEFGDRGEEVTVDPSLVFENERIRNAYIALQAWKLAILSDPLKQTANWVGSDVCTYTGVYCAPALDNPNIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFDRLKLLYELDLSNNRFAGRFPDVVLRLPILKFLDLRFNEFEGSVPRELFDKDLDAIFINHNRFRFELPDNFGNSPVSVIVVANNNFHGCLPKSLGNMTRLNEIIMMNNGLNSCLPPVIGALKNLTVFDVSSNQLVGPLPETFGGLVSLEQLNVANNFLSGKIPGSICDLPKLQNFTFSNNFFSGEPPECLRVPEFSDRRNCLPGRPMQRPSGKCNSFLSNPVDCNAFKCGGSSSVTPSSPFSPPAVSPSSPPSPVAPSSPPSFPSPVAPSSPPSPSQSPSTPTEPPLSPHFPPLSPPPSPSSPTTPTTPSSPPHFPSPSAPSPSSPTTPTTPSSPPHFPSPSAPSPSSPHQGPSPPSLPSPSSPPLGHTPPSEPTQPSPPHSHTPPTPPSPTKPSPSLPPQGHTPPGPSPSEPSPSSPPQAHTPQSPPSPTEPSPSSPPYGHISPAEPSPPGISAPPFPVHTPPPPHFPDFPSPPNTQPPVYCPRSPYPPSPPSYSPNPPDSHFTSPPPPPPVYSPPPVHTSPSPLPCTKPPSPPPGAHYSEPPPPQSSTPSSPIHYNSPPPPPPPPPGQYQSPPSPSPPVSVYPPLSPSPPPPVIYESPPPPPTPVYGGPLPPIYGVPYASPPPPPFY 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2873279 2875648 + CmoCh11G005960.1 Cmo11g00596 391215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00596 789 MobiDBLite consensus disorder prediction 401 776 - -
Cmo11g00596 789 MobiDBLite consensus disorder prediction 395 776 - -
Cmo11g00596 789 Gene3D Ribonuclease Inhibitor 71 359 IPR032675 -
Cmo11g00596 789 SUPERFAMILY L domain-like 81 351 - -
Cmo11g00596 789 Pfam Leucine rich repeat 283 340 IPR001611 GO:0005515
Cmo11g00596 789 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 527 - -
Cmo11g00596 789 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 21 527 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00596 Cmo-Chr11:2873279 Cmo14g01778 Cmo-Chr14:13715371 4.66E-141 dispersed
Cmo01g01932 Cmo-Chr1:13801421 Cmo11g00596 Cmo-Chr11:2873279 7.93E-132 transposed
Cmo10g00642 Cmo-Chr10:2945225 Cmo11g00596 Cmo-Chr11:2873279 0 wgd
Cmo11g00596 Cmo-Chr11:2873279 Cmo12g01271 Cmo-Chr12:11268328 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00596 - - cmax:111499732 757.673