Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00602 ATGGAAAATCAATCCAATGGAAAATCCGACTCCCATCTCAACATACCCAAAATCAAGTTCACCAAGCTCTTCATCAATGGACAATTTGTTGACTCTGTTTCAGGAAAAACTTTCGAGACGTTCGATCCAAGAACTGGTAAGGTTATCACGACGGTTGCCGCCGGTGAGAAAGAAGATGTGGATCTGGCCGTGAAAGCAGCCCGTGAAGCCTTCGATCACGGCCCTTGGCCCCGCATGTCTGGTGCCGACAGGGGACGAATAATGATGAAACTGGGGGACTTAATAGATGAACACGTGGAGGAAATCGCAGCATTGGATTCCCTGGACGGCGGAAAATTGTTTCAGATGGGGAAGATCGTCGACGTACCGTCGGCTGCTAATATGCTACGGTACTACGCCGGTGCCGCGGATAAAATCCACGGGGAGGTACTCAAAATGGCAAGGCCGTTTCACGGCTACACTTTAATGGAGCCCATGGGAGTGGTGGGCCACATCATACCCTGGAACTTTCCGACCACCATGTTCTTCTTGAAAGTGAGCCCCGCCTTGGCTGCCGGCTGCACCATGCTCGTCAAACCTGCCGAGCAAACGCCGCTCTCCGCCCTCTTCTACGCCCATCTCGCTAAATTGGCTGGTATTCCTGATGGAGTACTGAACGTTGTGACAGGATACGGATACACTGCAGGGTCAGCAATTGCGTACCACATGGACATTGACAAGGTGAGTTTCACAGGATCAACGAAGGTGGGAAGATCGATAATGCAGGCGGCAAGCGAGAGCAATCTGAAGCAAGTATCGTTGGAATTAGGAGGCAAATCGCCGCTCCTAATCTTCGATGATGCGGATGTGAATAAAGCCGTTGATATTGCTGTTCTTGGCATTTTCTATAACAAGGGAGAAACTTGCGCGGCCAGCTCCCGAGTTTTGGTTCAAGAAGGGATTTATGATGAATTTGTGAAAAAGATTATTGAAAAGGCGAAATCTTGGGTTGTGGGAGACCCTTTTGATCCTAAAGTTCAGTATGGACCCCAGGTGGATGAAAAGCAATTGAAGAAAATTCTGGAATATATCGAGCACGGTAAGAGGGAAGGAGCCACATTGGCGACAGGCGGCAGGCGTATAGGCGAGGTGGGGTATTACGTAGAGCCAACAATCTTCACAGACGTCAAGGAACACTCGCTGATCGCACAGGACGAAATCTTCGGGCCATTCCTCTGCGTCATTAAATTCAAAACGATCGAGGAGGGAATAAAGATCGCGAACAACACAAAGTTCGGGCTAGCAGCTGGAATAGTGACGAACAGTGTAGACATAATGAACACGGTTTCGAGGTCGATCAGAGCCGGAACCATCTGGGTGAACTGTTACTTTGCTTTCGACTCGAGCTGTCCATTTGGAGGGTACAAGATGAGTGGGTTCGGTAGGGACGCTGGAATGCACGCGGTTCATAAGTATCTTCAAACCAAAGCCATCGTCACTCCTTTGGTCAACACTCCTTGGCTTTGA 1506 49.47 MENQSNGKSDSHLNIPKIKFTKLFINGQFVDSVSGKTFETFDPRTGKVITTVAAGEKEDVDLAVKAAREAFDHGPWPRMSGADRGRIMMKLGDLIDEHVEEIAALDSLDGGKLFQMGKIVDVPSAANMLRYYAGAADKIHGEVLKMARPFHGYTLMEPMGVVGHIIPWNFPTTMFFLKVSPALAAGCTMLVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGYTAGSAIAYHMDIDKVSFTGSTKVGRSIMQAASESNLKQVSLELGGKSPLLIFDDADVNKAVDIAVLGIFYNKGETCAASSRVLVQEGIYDEFVKKIIEKAKSWVVGDPFDPKVQYGPQVDEKQLKKILEYIEHGKREGATLATGGRRIGEVGYYVEPTIFTDVKEHSLIAQDEIFGPFLCVIKFKTIEEGIKIANNTKFGLAAGIVTNSVDIMNTVSRSIRAGTIWVNCYFAFDSSCPFGGYKMSGFGRDAGMHAVHKYLQTKAIVTPLVNTPWL 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2906497 2909122 - CmoCh11G006020.1 Cmo11g00602 391221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00602 501 SUPERFAMILY ALDH-like 16 497 IPR016161 GO:0016491
Cmo11g00602 501 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 4 501 - -
Cmo11g00602 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Cmo11g00602 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Cmo11g00602 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Cmo11g00602 501 Pfam Aldehyde dehydrogenase family 29 491 IPR015590 GO:0016491
Cmo11g00602 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Cmo11g00602 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 501 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00105 Cmo-Chr11:548605 Cmo11g00602 Cmo-Chr11:2906497 0 dispersed
Cmo11g00602 Cmo-Chr11:2906497 Cmo12g00001 Cmo-Chr12:477 0 dispersed
Cmo17g00659 Cmo-Chr17:6835216 Cmo11g00602 Cmo-Chr11:2906497 2.13E-55 dispersed
Cmo10g00644 Cmo-Chr10:2954680 Cmo11g00602 Cmo-Chr11:2906497 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00602 K12355 - csv:101219029 855.899