Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00619 | ATGTCGTCTCCTGCTCCCATCTCGCCGCCGGGGACTAACTCGACCTCACCCCCACCACCGACCACGGATGCACCACCTCCAGCATCTCCATCTCTCTCACCGCCTCCGCCTGCTTCATCGCCGCCGCCTCCGAACAGTACCACTCCATCTCCGCCTACTTCTTCTCCTTCCCCGCCGGACGTGCCTTCGAGCTCTCCCCCGCCGCCGCCTACCGACTCGACGGCTCCACCGCAACTTCCGAGTCCGACGCCGCCATCCAATTCTAGTACACCTGTGAATCCCGGAGGAAATCAGGCTCCGCCGTCGGAAACGGCGCCATCTCCCTCATCATCGTCGGGAGTTTCGGCGGGACTTGTGTCTGGGGTTGTCGTTGGAGTGTTAGTGGTGGTTGTAGCGTTGATTGCTATGTGGTTTTATTTAAGAAAGAAGAGGAGACGCGACGAGGAGGCGTACTACCGGCCACCGCATCCGCCTGCGCCACCGGCGGCGTTTAAAGACGGCCAATACGGTCCCCAACAGCACCATTGGCAATCACATCCGCCGCCGCCAGGGGATCATATCGCGGGGACAGTACCAAAGCCGTCTCCTCCGCCAGCATCACGGCCACCGCCGTCACCCCCGATTATAAACAGTAGCGGAGGGTCTGGATCTAATTATTCAGGGTCTGAAAATTCGTTGGCTCCAGCTCCATCTTCTGTTCCCTTGGGGTTCTCACAGAGCAGTTTCACTTACGAAGAATTAGCAATGGCGACAGATGGGTTTTCAGAAGCCAATCTCCTCGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTTCTTCCTAACGGAAAGGAAGTGGCAGTGAAACAACTTAAAGCTGGAAGCGGACAAGGAGAGCGTGAATTCCAAGCAGAAGTTGAAATTATCAGCCGAGTTCATCATAGGCATCTTGTTTCTTTGGTCGGATATTGCATCACTGGCTCCCAAAGATTGCTGGTTTATGAATTCGTTCCCAACAACACATTGGAGTTTCACTTGCACGGGAAAGGACGACCTACCATGGATTGGCCAACCAGGCTCAAAATCGCTTTGGGATCTGCCAAGGGATTGGCCTACCTTCATGAGGACTGCAATCCTAAGATCATTCATCGTGACATCAAAGCAGCAAACATACTTTTAGATCTCAAATTCGAAGCAAAGGTTGCAGATTTTGGGCTTGCCAAGTTGTCTTCTGATGTTAATACCCATGTTTCAACTCGAGTCATGGGCACTTTCGGATATCTTGCTCCTGAATACGCTTCAAGTGGGAAACTAACTGAGAAATCAGACGTGTTCTCCTATGGAGTAATGCTTCTGGAGTTGATTACTGGACGCAGACCTGTTGATCCAACTCAATCATTCATGGACGATGGATTGCTCGATTGGGCAAGGCCATTACTACTTCGGGCAACAGAAAATGGAAACTACGACGGTTTGGTAGATCCAAAGCTGCGAGATAACCACGACCACAACGAGATGGCGCGCATGGTTGCTTGCGCTGCGGCCTGTGTGCGTCATTCGGCGAGGCGTCGACCACGGATGAGTCAAGTGGTTCATGCTCTTGAAGGAGAAGCCTCGCTTTCTGATCTGAACGAAGGAATCCGACCTGGACATAGCACTGTGTACAGTTCTTATGGAAGCTCCGACTACGACACGGCTCAGTACAACGAGGATCTGAAGAAGTTCAGGAAGATGGCGTTGGCGAGCCAGGAGTATGGCAGCGAGTATAGCGAGCCGACGAGTGAGTATGGGCTGTACCCATCTGGGTCGAGTGGCGATGGGCAAACAACGAGGGAAATGGAGACGAGAACGATGAAGAAAGAAAGTGGAGGATTGATTTAG | 1860 | 52.63 | MSSPAPISPPGTNSTSPPPPTTDAPPPASPSLSPPPPASSPPPPNSTTPSPPTSSPSPPDVPSSSPPPPPTDSTAPPQLPSPTPPSNSSTPVNPGGNQAPPSETAPSPSSSSGVSAGLVSGVVVGVLVVVVALIAMWFYLRKKRRRDEEAYYRPPHPPAPPAAFKDGQYGPQQHHWQSHPPPPGDHIAGTVPKPSPPPASRPPPSPPIINSSGGSGSNYSGSENSLAPAPSSVPLGFSQSSFTYEELAMATDGFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRRPVDPTQSFMDDGLLDWARPLLLRATENGNYDGLVDPKLRDNHDHNEMARMVACAAACVRHSARRRPRMSQVVHALEGEASLSDLNEGIRPGHSTVYSSYGSSDYDTAQYNEDLKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGQTTREMETRTMKKESGGLI | 619 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2957148 | 2959763 | + | CmoCh11G006190.1 | Cmo11g00619 | 391238 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00619 | 619 | MobiDBLite | consensus disorder prediction | 1 | 115 | - | - | |
Cmo11g00619 | 619 | Pfam | Protein tyrosine and serine/threonine kinase | 258 | 527 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo11g00619 | 619 | Gene3D | Transferase(Phosphotransferase) domain 1 | 330 | 539 | - | - | |
Cmo11g00619 | 619 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 374 | 386 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo11g00619 | 619 | SUPERFAMILY | Protein kinase-like (PK-like) | 230 | 527 | IPR011009 | - | |
Cmo11g00619 | 619 | SMART | serkin_6 | 254 | 527 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g00619 | 619 | MobiDBLite | consensus disorder prediction | 210 | 231 | - | - | |
Cmo11g00619 | 619 | MobiDBLite | consensus disorder prediction | 582 | 619 | - | - | |
Cmo11g00619 | 619 | MobiDBLite | consensus disorder prediction | 582 | 604 | - | - | |
Cmo11g00619 | 619 | Gene3D | Phosphorylase Kinase; domain 1 | 227 | 329 | - | - | |
Cmo11g00619 | 619 | ProSiteProfiles | Protein kinase domain profile. | 254 | 533 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g00619 | 619 | ProSitePatterns | Protein kinases ATP-binding region signature. | 260 | 282 | IPR017441 | GO:0005524 | |
Cmo11g00619 | 619 | MobiDBLite | consensus disorder prediction | 90 | 115 | - | - | |
Cmo11g00619 | 619 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Cmo11g00619 | 619 | MobiDBLite | consensus disorder prediction | 148 | 231 | - | - | |
Cmo11g00619 | 619 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 12 | 607 | - | - | |
Cmo11g00619 | 619 | PANTHER | SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 12 | 607 | - | - | |
Cmo11g00619 | 619 | MobiDBLite | consensus disorder prediction | 185 | 209 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00619 | Cmo-Chr11:2957148 | Cmo18g00802 | Cmo-Chr18:9482250 | 3.42E-159 | dispersed | |
Cmo14g01393 | Cmo-Chr14:11465840 | Cmo11g00619 | Cmo-Chr11:2957148 | 5.10E-93 | dispersed | |
Cmo10g00657 | Cmo-Chr10:3018920 | Cmo11g00619 | Cmo-Chr11:2957148 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74659 | PF07714 | PK_Tyr_Ser-Thr | 1.10E-46 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00619 | - | - | csv:101222748 | 830.091 |