Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00656 ATGGACGAGTCCGACCACCACCAACTCCACCAAGCCGATTCTCTTTCTGGTCTGTCGTCCATACTCAGCACCGACGATTCCAGAACCTCCTCCAGTTCCGGCGAGATTCCTGCTTCTATTCGCACCGAGTCGATGAAGGTGTCGGAAGCAGGGAGGCGGAAGTGCGTGGGGAGGAACAATAGAAGCGGACTGCACTGGGGGCTCACGTCGGTTATTGGACGGCGGATGGAGATGGAGGACGCTATCGCCGTGAAGCCGGGATTAATGTCTTCAAGATGCAACCACGTCGGAGGTTGTACGGCTCCAGATTCCAGAACCTCGGGTGAGATCTCGCCGGTTCATTTCTTCGCCGTGTACGATGGTCACGGCGGGTCTCAGCAACACATGTCACTCAATGAGTGGTCCTCAGTGGAAAGAATTTTGGATGCTCCCATTCAACAAGTGCATATGGTGGCGAAATTCTGTGCGGAGCGGATGCATGAAGTGATAGCAGAAGAGTGGGGAAGAGAAGGAATCAACGGCCATGATTGGCAGAAGAGATGGGAAGTAGCCTTCTCTAATGGCTTCCAGAGGACTGATAATGAGGTTGTTTCAGAGGCGGTTGCGACCGACATGATCGGATCCACGGCGGTTGTACTCCTTCTATCTGGCTGCCAGATTATCGTTTCCAATTGCGGCGACTCTCGGGCGGTTCTTTTCCAGCGGAATAAAGCGATTCCATTAACAGTCGATCAAAAGCCTGATAGAAAGGATGAACTGATGAGAATTGAGAGAGATGGAGGCAAAGTCATAAACTGGATGGGCGCTAGAGTGCTTGGAGTTCTTGCCATGTCAAGAGCCATAGGTTTCCGCCTCCCCTCCCCCTCCATGTCGATGTATAATTACATACATTTGCCTCTCAGCTTGACCATTGTCTTTCTGTGTATGGATGGGGATCGATATCTTCGGCCGTGGATAATTCCAGTCCCGGAAGTTAGTTTCACCACCAGGAGTGATGAGGATGAATGTGTGATTCTGGCAAGCGACGGGCTCTGGGATGTAATGACGAATGAAGAGGTTGGGCAGGTGGCTTGCCATCTTCTCAGGCGGCACCGCAGGTCGTCGACAACCGATAACACACCTCCGGCACAAATTGTTGCTAATAATCTCACTGAAATGGCATACGGAAGAAACAGTTCTGATAACATTTCTGTCATTGTCATCGATCTGAAAGCCAGGAAAGGACACCCACAGAGGCAGTGA 1242 51.37 MDESDHHQLHQADSLSGLSSILSTDDSRTSSSSGEIPASIRTESMKVSEAGRRKCVGRNNRSGLHWGLTSVIGRRMEMEDAIAVKPGLMSSRCNHVGGCTAPDSRTSGEISPVHFFAVYDGHGGSQQHMSLNEWSSVERILDAPIQQVHMVAKFCAERMHEVIAEEWGREGINGHDWQKRWEVAFSNGFQRTDNEVVSEAVATDMIGSTAVVLLLSGCQIIVSNCGDSRAVLFQRNKAIPLTVDQKPDRKDELMRIERDGGKVINWMGARVLGVLAMSRAIGFRLPSPSMSMYNYIHLPLSLTIVFLCMDGDRYLRPWIIPVPEVSFTTRSDEDECVILASDGLWDVMTNEEVGQVACHLLRRHRRSSTTDNTPPAQIVANNLTEMAYGRNSSDNISVIVIDLKARKGHPQRQ 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3152471 3154927 + CmoCh11G006560.1 Cmo11g00656 391275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00656 413 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 40 126 - -
Cmo11g00656 413 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 151 289 - -
Cmo11g00656 413 CDD PP2Cc 67 403 IPR001932 -
Cmo11g00656 413 Pfam Protein phosphatase 2C 148 396 IPR001932 -
Cmo11g00656 413 SUPERFAMILY PP2C-like 59 404 IPR036457 -
Cmo11g00656 413 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Cmo11g00656 413 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 311 413 - -
Cmo11g00656 413 MobiDBLite consensus disorder prediction 1 54 - -
Cmo11g00656 413 Gene3D - 58 411 IPR036457 -
Cmo11g00656 413 ProSiteProfiles PPM-type phosphatase domain profile. 65 403 IPR001932 -
Cmo11g00656 413 PANTHER ALPHABET, ISOFORM E-RELATED 40 126 - -
Cmo11g00656 413 PANTHER ALPHABET, ISOFORM E-RELATED 151 289 - -
Cmo11g00656 413 PANTHER ALPHABET, ISOFORM E-RELATED 311 413 - -
Cmo11g00656 413 MobiDBLite consensus disorder prediction 11 39 - -
Cmo11g00656 413 SMART PP2C_4 55 401 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00696 Cmo11g00656 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00656 Cmo-Chr11:3152471 Cmo14g01289 Cmo-Chr14:10793271 2.27E-75 dispersed
Cmo10g00696 Cmo-Chr10:3188808 Cmo11g00656 Cmo-Chr11:3152471 0 wgd
Cmo11g00656 Cmo-Chr11:3152471 Cmo17g00734 Cmo-Chr17:7322476 3.41E-25 wgd
Cmo11g00656 Cmo-Chr11:3152471 Cmo08g00699 Cmo-Chr8:4443521 6.25E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00656 K14497 - csv:101220173 560.451