Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00664 ATGGGGAGAGCCACCAGATGGCTGAAGAACTTGTTTGGGATTAAGAAAGAAAAACAACCCACCATGGAAAATTCCACCTCCGCCTTCATGAAGGATAAGAACCCCACTTCTAATTTCGTCGGAGACGCCCAACTCTGCAACAATCCGGCTACAATACCGCCCAATTTATCCGCCGCTGAGGCCGCTTGGCTCAAATCCTTCTACTCCGAAACAGAGAAGGAACAGAGCAAGCACGCTATAGCAGTAGCTGCAGCCACTGCTGCTGCTGCTGATGCTGCGGTTGCTGCAGCACAAGCTGCTGTGGCTGTCGTCCGGCTCACTAGCCATGGGCGAGGTACTATGTTCGGTGGCGGCCGAGAGAGATGGGCCTCTGTCAAGATTCAAACTTGCTTCAGAGGGTTTCTGGCGAGAAAAGCACTGAGAGCGCTTAAAGGACTGGTGAAATTACAGGCGCTTGTGAGAGGATATTTGATTCGTAAACAAGCAACGGCAACTCTTCATAGTATGCAAGCTTTAATCAGAGCTCAGGCCACCGTTCGATCTCAGAGAACTCGCAGATTTGAACTCCAAGCTCGAAAATCTACGGAGCGGTTTGACGACACAAGGAGTGAGCACACAGCTTCAGTACACAGCAGAAGGCTTTCATCTTCTTTTGACAACACACCATTTACAGCGCTTGAAGAAAGCCCCAAAATCGTTGAAATGGACACCGGCCGACCAAAATCCTGGTCACGCCGGACGAACACGTCAGCGTCGGAATTTGGCGACGACCCATTTCACCAAACGTTGTCGTCTCCACTCCCCTGTCGAACTCCGTCGCGTTTGCAGATTCCTGATTGCCGGCATGATTCCGACTGGGGTCTCACTGGCGACGAGTGCCGTTTGATCTCGACAGCGCAGAGCACTCCACGATTCGTCAGCTCCGGCAGATCCAATGGCCCTCCGACTCCAGCGAAGAGCATTTGTGCTGATAATTTCTTCAGAGGGTACTTGAATTTCCCAAATTACATGGCGAATACTCAATCGTTTATGGCGAAATTGAGGTCCCAGAGTGCTCCGAAACAGAGGCCGGAGCCGGGCTCGAAGAAGAGGCTTTCGTTGAATGAATTAATGGAATCGAGAAGCAGCCTTAGTGGGGTTCGAATGCAGAGGTCTTGTTCGCAGGTACAAGAAGCCATTAATTTCAAGAATGCTGTGATGAGCAAACTGGATAGACCATCGGAATTCAACAACTTGCAGAGAAGATCATGA 1251 50.6 MGRATRWLKNLFGIKKEKQPTMENSTSAFMKDKNPTSNFVGDAQLCNNPATIPPNLSAAEAAWLKSFYSETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGRERWASVKIQTCFRGFLARKALRALKGLVKLQALVRGYLIRKQATATLHSMQALIRAQATVRSQRTRRFELQARKSTERFDDTRSEHTASVHSRRLSSSFDNTPFTALEESPKIVEMDTGRPKSWSRRTNTSASEFGDDPFHQTLSSPLPCRTPSRLQIPDCRHDSDWGLTGDECRLISTAQSTPRFVSSGRSNGPPTPAKSICADNFFRGYLNFPNYMANTQSFMAKLRSQSAPKQRPEPGSKKRLSLNELMESRSSLSGVRMQRSCSQVQEAINFKNAVMSKLDRPSEFNNLQRRS 416
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 3196822 3198438 + CmoCh11G006640.1 Cmo11g00664 391283
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00664 416 MobiDBLite consensus disorder prediction 235 267 - -
Cmo11g00664 416 MobiDBLite consensus disorder prediction 193 214 - -
Cmo11g00664 416 Pfam IQ calmodulin-binding motif 121 141 IPR000048 GO:0005515
Cmo11g00664 416 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Cmo11g00664 416 MobiDBLite consensus disorder prediction 193 209 - -
Cmo11g00664 416 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Cmo11g00664 416 SMART iq_5 119 141 IPR000048 GO:0005515
Cmo11g00664 416 SMART iq_5 142 163 IPR000048 GO:0005515
Cmo11g00664 416 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Cmo11g00664 416 Pfam Protein of unknown function (DUF4005) 305 381 IPR025064 -
Cmo11g00664 416 PANTHER - 1 407 - -
Cmo11g00664 416 MobiDBLite consensus disorder prediction 242 267 - -
Cmo11g00664 416 Gene3D - 117 171 - -
Cmo11g00664 416 Coils Coil 414 416 - -
Cmo11g00664 416 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cmo10g00702 Cmo11g00664 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00664 Cmo-Chr11:3196822 Cmo14g01779 Cmo-Chr14:13719051 2.39E-36 dispersed
Cmo01g00094 Cmo-Chr1:424535 Cmo11g00664 Cmo-Chr11:3196822 2.50E-68 wgd
Cmo10g00702 Cmo-Chr10:3221407 Cmo11g00664 Cmo-Chr11:3196822 0 wgd
Cmo11g00664 Cmo-Chr11:3196822 Cmo14g01322 Cmo-Chr14:11042130 2.44E-82 wgd
Cmo11g00664 Cmo-Chr11:3196822 Cmo17g00728 Cmo-Chr17:7275951 5.81E-111 wgd
Cmo11g00664 Cmo-Chr11:3196822 Cmo08g00706 Cmo-Chr8:4464506 1.03E-121 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00664 - - cmax:111495188 728.013