Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00708 | ATGGAGGTTCTGGTTCCAACCATTCTTCACCTACTGATTCTTTTGGTCACTGTTCATGCTTCCGAGCTTCGGGACATTGCAGAGCCTTATATCTCTCCAGCAGTAGCTCTTTCCCCTAATAATGCATTACCACCTCTGAATCATTCCCCGGAAGAAGCTCCTTCCCCTCACAATGACATGGGACACTCTCATGATGCTGACCAGCCAATTCTTCCATCACAAGAAGCTCATGATGTTGAACAGCCAAATGAAGATTGTTCGGCTACCCTATGCACCGATCCGTATACAAATACTCCCCCGGGATCCCCCTGTGGTTGTGTTTGGCCCATACAAGTTCGACTTCGTTTCAGTGTTCCCCTCTATACCTTCTTCCCTCTAGTTTCAGAGCTGGCTGCTGAAATTGCTTCTGGAGTATATGTAAAGCGAAGTCAAGTTCGTGTTATTGAGGCCAATGCAGCTTATCAGCAACCAGATAAGACTGTTGCCCTTATTGACTTAGTCCCACTTGGGGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAAAAAGTTTCTATCAAAGCTTACTATTTCGGGAACTATGAAGTGTTATACGTTCGATATCCAGGTTTGCCTCGATCGCCCCCTCCTGGAGTTTCAGGGCTAGATAATGAGCCTCATTTGACTAATACTAACAATGCGAGGACAGTAAAACCCGTCGGTGTCGATGTGCACAACAGACAGCCAAAAGATAGAATAAGTGATGGTATGATTGCTATCATCACCCTATCAACTACTGTTGCAGTGGGCTCATGTCTTGTTACTGCTTGGATTTTGATCTTTACACATAATGATGCAAAACCAAATCCACATGTTTCGTTATCCGCCCTCAATAAGCCATCAGGTGGTGGTGGATCAGTTATGGCAACCATGCCTAGTTCTGCCTCTTTATCCTTTGGATATAGCATTGCTTCATATTCAGGATCAGCCAAGATCTTCAGTGCCTCTGACATAGAGAGAACCACAAATAATTTTGATCCTTCAAGAATACTGGGGGAGGGTGGGTTTGGACGTGTTTACAGTGGCACGCTCGAAGATGGTATCGAAGTAGCAATCAAAGTTCTCAAGAGAGATGATCATCAGGGCGGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGCCGCCTCCACCACAGAAATTTGGTCAAATTGATTGGAATATGTACTGAGGAGCATAACTGTTCCCTGGTGTATGAACTTGTTCCAAATGGCAGTGTTGAATCTCATTTACATGGTATAGATAAGGAAACTGGCCTACTTGATTGGGGTGCCAGGATGAAGATAGCGCTTGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCGAGTCCTAGAGTCATACATCGAGATTTCAAATCGAGTAATATCTTACTAGAACATGATTTTACACCAAAAGTTTCCGACTTCGGGTTGGCTCGAACTGCCACAGATGAGGAAAGCAGACACATAACTACACATGTCATGGGAACTTTCGGGTATGTGGCTCCAGAGTATGCGATGACTGGTCATCTACTTGTGAAGAGTGACGTTTATAGCTATGGGGTTGTTCTTCTTGAGCTATTAACGGGTAGGAAACCAGTTGATATGTCACAACCACCCGGTGAAGAAAATCTCGTTGCTTGGGCTCGTCCACTCCTCACAAGCAAAGAAGGTCTAGATGTTATAATTGATAAATCACTAGATTCTAATGTTCCTTTTGAAAACATTGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTGCAACCAGAGGTGTCACACCGACCTTTCATGAGTGAGGTCGTTCAAGCATTGAAACTAGTTTGCAACCAATGA | 1872 | 44.02 | MEVLVPTILHLLILLVTVHASELRDIAEPYISPAVALSPNNALPPLNHSPEEAPSPHNDMGHSHDADQPILPSQEAHDVEQPNEDCSATLCTDPYTNTPPGSPCGCVWPIQVRLRFSVPLYTFFPLVSELAAEIASGVYVKRSQVRVIEANAAYQQPDKTVALIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKAYYFGNYEVLYVRYPGLPRSPPPGVSGLDNEPHLTNTNNARTVKPVGVDVHNRQPKDRISDGMIAIITLSTTVAVGSCLVTAWILIFTHNDAKPNPHVSLSALNKPSGGGGSVMATMPSSASLSFGYSIASYSGSAKIFSASDIERTTNNFDPSRILGEGGFGRVYSGTLEDGIEVAIKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEEHNCSLVYELVPNGSVESHLHGIDKETGLLDWGARMKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTATDEESRHITTHVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSNVPFENIAKVAAIASMCVQPEVSHRPFMSEVVQALKLVCNQ | 623 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3418297 | 3422991 | - | CmoCh11G007080.1 | Cmo11g00708 | 391327 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00708 | 623 | SUPERFAMILY | Protein kinase-like (PK-like) | 323 | 617 | IPR011009 | - | |
Cmo11g00708 | 623 | PANTHER | OS01G0750732 PROTEIN | 42 | 623 | - | - | |
Cmo11g00708 | 623 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 42 | 623 | - | - | |
Cmo11g00708 | 623 | Gene3D | Transferase(Phosphotransferase) domain 1 | 420 | 623 | - | - | |
Cmo11g00708 | 623 | Pfam | Protein tyrosine and serine/threonine kinase | 348 | 617 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo11g00708 | 623 | ProSiteProfiles | Protein kinase domain profile. | 344 | 620 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g00708 | 623 | CDD | STKc_IRAK | 350 | 618 | - | - | |
Cmo11g00708 | 623 | Gene3D | Phosphorylase Kinase; domain 1 | 320 | 419 | - | - | |
Cmo11g00708 | 623 | MobiDBLite | consensus disorder prediction | 42 | 70 | - | - | |
Cmo11g00708 | 623 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 466 | 478 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo11g00708 | 623 | ProSitePatterns | Protein kinases ATP-binding region signature. | 350 | 372 | IPR017441 | GO:0005524 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00745 | Cmo11g00708 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00708 | Cmo-Chr11:3418297 | Cmo19g00148 | Cmo-Chr19:815151 | 0 | dispersed | |
Cmo10g00745 | Cmo-Chr10:3433113 | Cmo11g00708 | Cmo-Chr11:3418297 | 9.34E-07 | wgd | |
Cmo11g00708 | Cmo-Chr11:3418297 | Cmo17g00697 | Cmo-Chr17:7083257 | 0 | wgd | |
Cmo11g00708 | Cmo-Chr11:3418297 | Cmo08g00740 | Cmo-Chr8:4690171 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74664 | PF07714 | PK_Tyr_Ser-Thr | 1.00E-49 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00708 | - | - | cmax:111466443 | 1210.67 |