Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00708 ATGGAGGTTCTGGTTCCAACCATTCTTCACCTACTGATTCTTTTGGTCACTGTTCATGCTTCCGAGCTTCGGGACATTGCAGAGCCTTATATCTCTCCAGCAGTAGCTCTTTCCCCTAATAATGCATTACCACCTCTGAATCATTCCCCGGAAGAAGCTCCTTCCCCTCACAATGACATGGGACACTCTCATGATGCTGACCAGCCAATTCTTCCATCACAAGAAGCTCATGATGTTGAACAGCCAAATGAAGATTGTTCGGCTACCCTATGCACCGATCCGTATACAAATACTCCCCCGGGATCCCCCTGTGGTTGTGTTTGGCCCATACAAGTTCGACTTCGTTTCAGTGTTCCCCTCTATACCTTCTTCCCTCTAGTTTCAGAGCTGGCTGCTGAAATTGCTTCTGGAGTATATGTAAAGCGAAGTCAAGTTCGTGTTATTGAGGCCAATGCAGCTTATCAGCAACCAGATAAGACTGTTGCCCTTATTGACTTAGTCCCACTTGGGGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAAAAAGTTTCTATCAAAGCTTACTATTTCGGGAACTATGAAGTGTTATACGTTCGATATCCAGGTTTGCCTCGATCGCCCCCTCCTGGAGTTTCAGGGCTAGATAATGAGCCTCATTTGACTAATACTAACAATGCGAGGACAGTAAAACCCGTCGGTGTCGATGTGCACAACAGACAGCCAAAAGATAGAATAAGTGATGGTATGATTGCTATCATCACCCTATCAACTACTGTTGCAGTGGGCTCATGTCTTGTTACTGCTTGGATTTTGATCTTTACACATAATGATGCAAAACCAAATCCACATGTTTCGTTATCCGCCCTCAATAAGCCATCAGGTGGTGGTGGATCAGTTATGGCAACCATGCCTAGTTCTGCCTCTTTATCCTTTGGATATAGCATTGCTTCATATTCAGGATCAGCCAAGATCTTCAGTGCCTCTGACATAGAGAGAACCACAAATAATTTTGATCCTTCAAGAATACTGGGGGAGGGTGGGTTTGGACGTGTTTACAGTGGCACGCTCGAAGATGGTATCGAAGTAGCAATCAAAGTTCTCAAGAGAGATGATCATCAGGGCGGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGCCGCCTCCACCACAGAAATTTGGTCAAATTGATTGGAATATGTACTGAGGAGCATAACTGTTCCCTGGTGTATGAACTTGTTCCAAATGGCAGTGTTGAATCTCATTTACATGGTATAGATAAGGAAACTGGCCTACTTGATTGGGGTGCCAGGATGAAGATAGCGCTTGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCGAGTCCTAGAGTCATACATCGAGATTTCAAATCGAGTAATATCTTACTAGAACATGATTTTACACCAAAAGTTTCCGACTTCGGGTTGGCTCGAACTGCCACAGATGAGGAAAGCAGACACATAACTACACATGTCATGGGAACTTTCGGGTATGTGGCTCCAGAGTATGCGATGACTGGTCATCTACTTGTGAAGAGTGACGTTTATAGCTATGGGGTTGTTCTTCTTGAGCTATTAACGGGTAGGAAACCAGTTGATATGTCACAACCACCCGGTGAAGAAAATCTCGTTGCTTGGGCTCGTCCACTCCTCACAAGCAAAGAAGGTCTAGATGTTATAATTGATAAATCACTAGATTCTAATGTTCCTTTTGAAAACATTGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTGCAACCAGAGGTGTCACACCGACCTTTCATGAGTGAGGTCGTTCAAGCATTGAAACTAGTTTGCAACCAATGA 1872 44.02 MEVLVPTILHLLILLVTVHASELRDIAEPYISPAVALSPNNALPPLNHSPEEAPSPHNDMGHSHDADQPILPSQEAHDVEQPNEDCSATLCTDPYTNTPPGSPCGCVWPIQVRLRFSVPLYTFFPLVSELAAEIASGVYVKRSQVRVIEANAAYQQPDKTVALIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKAYYFGNYEVLYVRYPGLPRSPPPGVSGLDNEPHLTNTNNARTVKPVGVDVHNRQPKDRISDGMIAIITLSTTVAVGSCLVTAWILIFTHNDAKPNPHVSLSALNKPSGGGGSVMATMPSSASLSFGYSIASYSGSAKIFSASDIERTTNNFDPSRILGEGGFGRVYSGTLEDGIEVAIKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEEHNCSLVYELVPNGSVESHLHGIDKETGLLDWGARMKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTATDEESRHITTHVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSNVPFENIAKVAAIASMCVQPEVSHRPFMSEVVQALKLVCNQ 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3418297 3422991 - CmoCh11G007080.1 Cmo11g00708 391327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00708 623 SUPERFAMILY Protein kinase-like (PK-like) 323 617 IPR011009 -
Cmo11g00708 623 PANTHER OS01G0750732 PROTEIN 42 623 - -
Cmo11g00708 623 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 42 623 - -
Cmo11g00708 623 Gene3D Transferase(Phosphotransferase) domain 1 420 623 - -
Cmo11g00708 623 Pfam Protein tyrosine and serine/threonine kinase 348 617 IPR001245 GO:0004672|GO:0006468
Cmo11g00708 623 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00708 623 CDD STKc_IRAK 350 618 - -
Cmo11g00708 623 Gene3D Phosphorylase Kinase; domain 1 320 419 - -
Cmo11g00708 623 MobiDBLite consensus disorder prediction 42 70 - -
Cmo11g00708 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Cmo11g00708 623 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00745 Cmo11g00708 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00708 Cmo-Chr11:3418297 Cmo19g00148 Cmo-Chr19:815151 0 dispersed
Cmo10g00745 Cmo-Chr10:3433113 Cmo11g00708 Cmo-Chr11:3418297 9.34E-07 wgd
Cmo11g00708 Cmo-Chr11:3418297 Cmo17g00697 Cmo-Chr17:7083257 0 wgd
Cmo11g00708 Cmo-Chr11:3418297 Cmo08g00740 Cmo-Chr8:4690171 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74664 PF07714 PK_Tyr_Ser-Thr 1.00E-49 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00708 - - cmax:111466443 1210.67