Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00724 | ATGGAGAATCATCAGGAGGTTGAAAGCGAGGAAGAAGATGGAGTGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAATTGGAGTCGTGGGTTCGAGCTTGACTTTGGAGAAGGTCGCTGCGGCTAAACAGTATATTGAGAATCATTACAAGGCTCAAAAGAAACATATTCAAGAACGCAAAGAGAGGCGTTCCTTGCTAGAAAGGAGGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAGGATTTGGAGCACAAGGAGACTCAATACATTCGTCTCAAAAGGAATAAGATTTGTGTTGAGGATTTTGACCTTTTGACAATTATTGGGCGAGGTGCTTTTGGGGAGGTTAGACTTTGTCGGGAGAAGAAAACAGGCAACATATATGCTATGAAGAAGCTGAAGAAATCAGAAATGCTCAGTAGAGGACAGGTTGAACATGTCAGAGCTGAAAGAAATTTGCTTGCAGAAGTTGCAAGTCACTACATTGTGAAACTCTATTATTCCTTCCAAGATGCTGAATACTTGTATCTAATCATGGAGTATCTTCCTGGAGGTGACATGATGACTTTACTGATAAGGGAAGAAACTTTGACAGAAATCGTAGCCAGATTTTACATCGCTCAAAGCGTTCTAGCTATCGAGTCGATTCATACACATAACTACATTCACAGAGACATAAAACCGGACAACCTTCTTTTGGACCAAAGGGGTCATATGAAACTGTCTGATTTTGGTCTTTGCAAACCTCTTGACTGTTCAAATCTATCTTCTATAAATGAAAATGAAGTCCTTGACGACGATAACTTGCACGACACGGTGGATGTCGATGCAAGCGTTCCGGGGAAGAAAAGTGGGAGGCGTTGGAAGAGCCCCCTTGAACAACTTCAACATTGGCAGATTAACAGAAGGAAACTGGCATTCTCCACGGTTGGCACTCCAGATTATATAGCTCCAGAAGTGTTGCTTAAAAAAGGATACGGTGTTGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTAACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCCGATGAGATAAGGTTATCACCTGAAGCAAAGGACCTGATTAGTAGGCTGCTTTGTGATGCAGACCATCGGCTTGGGACCGGAGATGTCGACCAAATAAAGGTCAGTATCATAACTCATCCTTGGTTCAAAGATATCGAGTGGGACAAACTCTATGATATAGATGCAGCATTTAAGCCTGAGGTCAATGGGGAACTTGATACGCAGAACTTCATGCAATTTGATGAGGTCGATCCACCGCCAACGAGAACGGGATCTGGACCAATAAGGAAGATGTTCTTGACTCCTAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGATGCTGTCAAAGGGCTACGCCATTCATTTGGTAAGAGATTTCTTTCTTTCCCTATCTCATTCTTCGGTTCCCGCCCCGTCCCCTCGTATAGGACGTGTAACGATTTGAACTCAACCACCAGCCCGATTCGGACTTCGTCAGTTGACTCAACACAAAGTGACTCGGCACTGAACTACTCAACGACGTACTCAACGGGTGATAGGGAAGCCATACTGGGATCATCTGGGGATGCATTGTCACAGTAA | 1704 | 43.08 | MENHQEVESEEEDGVAEEEEEEEEEEEIGVVGSSLTLEKVAAAKQYIENHYKAQKKHIQERKERRSLLERRLASSDVSEEEQINLLKDLEHKETQYIRLKRNKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHYIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTEIVARFYIAQSVLAIESIHTHNYIHRDIKPDNLLLDQRGHMKLSDFGLCKPLDCSNLSSINENEVLDDDNLHDTVDVDASVPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDLISRLLCDADHRLGTGDVDQIKVSIITHPWFKDIEWDKLYDIDAAFKPEVNGELDTQNFMQFDEVDPPPTRTGSGPIRKMFLTPKDLSFVGYTYKNFDAVKGLRHSFGKRFLSFPISFFGSRPVPSYRTCNDLNSTTSPIRTSSVDSTQSDSALNYSTTYSTGDREAILGSSGDALSQ | 567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3495011 | 3501301 | + | CmoCh11G007240.1 | Cmo11g00724 | 391343 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00724 | 567 | SUPERFAMILY | Protein kinase-like (PK-like) | 106 | 462 | IPR011009 | - | |
Cmo11g00724 | 567 | Gene3D | Phosphorylase Kinase; domain 1 | 439 | 449 | - | - | |
Cmo11g00724 | 567 | Gene3D | Transferase(Phosphotransferase) domain 1 | 193 | 258 | - | - | |
Cmo11g00724 | 567 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 421 | 493 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cmo11g00724 | 567 | ProSitePatterns | Protein kinases ATP-binding region signature. | 115 | 138 | IPR017441 | GO:0005524 | |
Cmo11g00724 | 567 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 228 | 240 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo11g00724 | 567 | Gene3D | Transferase(Phosphotransferase) domain 1 | 312 | 438 | - | - | |
Cmo11g00724 | 567 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 26 | 503 | - | - | |
Cmo11g00724 | 567 | SMART | serkin_6 | 109 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g00724 | 567 | MobiDBLite | consensus disorder prediction | 527 | 546 | - | - | |
Cmo11g00724 | 567 | Gene3D | Phosphorylase Kinase; domain 1 | 107 | 192 | - | - | |
Cmo11g00724 | 567 | Pfam | Protein kinase domain | 111 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g00724 | 567 | Pfam | Protein kinase domain | 309 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g00724 | 567 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cmo11g00724 | 567 | ProSiteProfiles | Protein kinase domain profile. | 109 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo11g00724 | 567 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 26 | 503 | - | - | |
Cmo11g00724 | 567 | CDD | STKc_NDR_like | 107 | 484 | - | - | |
Cmo11g00724 | 567 | Coils | Coil | 1 | 27 | - | - | |
Cmo11g00724 | 567 | SMART | pkinase_C_6 | 421 | 485 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cmo11g00724 | 567 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00764 | Cmo11g00724 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01793 | Cmo-Chr1:13215370 | Cmo11g00724 | Cmo-Chr11:3495011 | 0 | dispersed | |
Cmo11g00724 | Cmo-Chr11:3495011 | Cmo17g00156 | Cmo-Chr17:904544 | 0 | dispersed | |
Cmo10g00764 | Cmo-Chr10:3533326 | Cmo11g00724 | Cmo-Chr11:3495011 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74665 | PF00069 | Pkinase | 4.90E-43 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00724 | K08790 | - | csv:101208238 | 910.598 |