Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00730 | ATGAGTGGACCAGTTAACATCATTGTTGGTTCTCATGTCTGGATTGAAGATCCAAAACTAGCATGGATTGATGGTGAAGTTTTTCGTATCAATGGAGAGGAAATTCACGTCCGGACTACAAATGGGAAGACGGTTGTTGCAAATATATCAAAAATATTCCCCAAGGATACCGAAGCACCTGCTGCAGGTGTCGATGACATGACAAAGTTGTCATACTTGCATGAACCTGGAGTTCTGAGCAACTTGGCTACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCCATAAATCCATTCCAAAGATTACCCCATCTGTATGATACTCACATGATGGAACAATACAAAGGAGCTGGATTTGGAGAACTAAGTCCTCATGTCTTTGCAGTTGCTGAAGTGGCATACAGGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACTGAGACCACGAAGATGCTCATGCGGTACCTTGCATACCTTGGAGGCCGATCTGGAGTGGAAGGACGAACAGTTGAACAACAAGTCCTGGAATCCAATCCAGTTCTTGAAGCATTTGGCAATGCGAAAACTGTTAGGAACAATAATTCAAGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAGTGGGAGAATATCTGGGGCAGCTGTCAGAACTTATTTGCTCGAAAGGTCTCGAGTATGTCAGATCTCAGATCCTGAAAGAAACTATCATTGCTTTTACCTTCTCTGTGCAGCTCCTCCTGAGGAAAGGGAGAAGTATAAATTAGGAGACCCTAAATCGTTCCACTACTTAAATCAATCTAAATGCTTTGAGTTGGATGGAATCAACGATGCCCATGAATATCTTGCGACCAGAAGAGCGATGGATGTAGTTGGAATCAGCGAGGAGGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCAATTTTGCATCTTGGAAATGTTGAATTTGCAAAGGGAGAAGAGATTGATTCTTCAGTCATTAAGGACGAAAAATCCAGATTCCATCTCAATACCACTGCCGAATTGCTTAAGTGTGATGCAAAGAGTTTGGAAGATGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAAGTTATAACTCGAACTCTTGATCCTGTTGCTGCATTGGGTAGTAGGGATGCCTTGGCTAAAACAATCTATTCACGGCTCTTCGACTGGCTCGTGGAGAAGATTAACAACTCAATTGGACAAGACCCAAATTCTAAATCATTGATTGGAGTTCTGGATATATATGGATTTGAGAGTTTTAAATTCAACAGCTTCGAACAGTTCTGCATCAATTTTACAAATGAAAAACTGCAGCAACATTTCAATCAGCACGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAGGAGATCAATTGGAGTTATATTGAGTTTGTTGATAACCAGGATGTCTTGGATCTTATTGAAAAGAAACCTGGAGGAATTATTGCTCTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACGTTCGCTCAGAAGTTATACCAGACGTTCAAGAACAACAAGCGCTTCATTAAGCCTAAGCTATCTCGTACTAGCTTCACAATATCTCATTATGCAGGAGAGGTGACTTATTTGGCAGATCTATTCTTGGACAAAAACAAAGACTATGTGGTAGCAGAGCATCAGGCCTTATTGACAGCCTCAAAATGCTCCTTTGCTAGAGCTCTATTTCCTCCTCAACCAGAGGAATCATCAAAATCCTCAAAATTTTCTTCCATCGGTTCACGTTTTAAGTTGCAACTTCAATCTTTAATGGAGACCTTGAATTCGACAGAACCTCACTATATCAGATGTGTCAAGCCAAATAATGTGCTCAAGCCTGCTATATTCGAGAACTCAAATGTTATCCAGCAATTACGTTGTGGTGGTGTTCTTGAAGCAATAAGGATCAGCTGTGCTGGATATCCTACGAGAAGAACATTTTATGAGTTCCTCCTACGTTTCGGGGTTCTTGCACCTGAAGTTCTGGATGGGAACTATGACGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGATTGAAAGGTTATCAGATTGGTAAGGCAAAAATCTTCCTGAGGGCTGGCCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGATGCTTAGCAACGCTGCCCGAACTATTCAAATGCAAATTCGAACATTTATTGCACGCAAGGAGTTCGTTGCATTACGTAAAGCTGCTATACAAGTGCAATCATTTACTCGAGGTGTATTGGCTCGAAAACTCTTCGAGCAGTTGAGACAGGAAGCAGCAGCTTTAAGAATCCAGAAGTGTTTCAAGCGACATGTTGCCAGGAAGTCGTACTTAGATTTGCTCTCATCTGCAACCACATTGCAAACAGGGTTAAGGGCGATGAAGGCTCGTGATGAGTTCAGATTTAGGAAGCGTACGAAGGCAGCAATTATCATTCAGGCACGTTGGCGTTGTCACATGGCATATTCTTACTATACGAGACTCCAAAAGGCTGCATTATACACACAATGTGGTTGGAGGCGACGAGTTGCACGAAAGGAGCTAAGACAACTGAAAATGGCTGCAAGGGAAACTGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTTACATGGCGCTTGCAACTCGAGAAGCGGCTGAGGACTGATCTGGAAGAGGAGAAAGCCCAGGAAATCGCCAAATTACAAGACGCTTTGCACGGTATGCAATTACAAGTTGAAGAAGCCAACGCTCAAGTTATCAAAGAGCGAGAGGCGGCCAAGAAAGCTATTGAAGAAGCGCCTCCGGTCGTCAAGGAAACTCCTGTTTTTGTTGAGGATACTGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTTTGAAGGCTTTGCTGCTGTCAGAGAAAAAGACATCCGAAGAGGCGAGAAAAGCATGTACAGATGCTGAAGCGAAAAATGTGGAGCTGGCTAAAAAACTTCAAGATGCAGACCAAAAGGTGGATCAACTTCAGGAGTCGGTGCAGAGGCTTGAAGAGAAGCTTTCAAATTCCGAATCAGAGAACCAGGTACTTCGTCAGCAAGCCTTGACCATGTCGCCAACAGGAAAAGCTTTATCTGCGAGACCGAAGTCGGTGATCATTCAGAGGACACCAGAGAATGGAAACATTCCACATGGAGAAGCCAAAGTATCATCTGATACAACTCTAGCATTATCGACGATACGTGAACCTGAATCAGAGGAAAAACCACAGAAATCGCTTAATGAAAAGCAGCAGGAGAACCAAGACCTGCTAGTGAAGTGCATAACACAGGATTTGGGATTTTCTGGAGGCAAACCAGTTGCTGCTTGTGTTATATACAAATGTCTTCTTCACTGGAGGTCGTTCGAAGTCGAAAGAACGAGCATATTCGATCGAATCATTCAAACAATAGCTTCATCCATAGAGGTCCAGGATAACAATGACGTATTAACTTATTGGTTATCGAATACGTCGACGTTATTGTTGCTTCTTCAACACACTCTCAAAGCAAGTGGGGCTGCTAGCTTGACCCCTCAGAGAAGGAGAACTGCTTCTTCTTCTCTTTTTGGAAGGATGTCTCAAGGATTAAGGGCTTCTCCACAAAGTGCTGGACTATCATTTCTAAGTAGCCGGGGGCTCGGTAGGTTGGACGATTTTCGGCAGGTCGAGGCAAAGTATCCAGCTCTGTTGTTTAAGCAACAGCTTACAGCATTCCTGGAGAAAATATATGGAATGATAAGAGACAACCTCAAGAAAGAGATCTCGCCTTTACTTGGATTATGTATTCAGGCTCCTAGGACGTCACGAGCAAGCTTAGTGAAAGGACGCTCCCAAGCTAACGCTATTGCTCAGCAGGCCTTAATTGCTCATTGGCAAAGCATTGTGAAAAGTTTAAACAATTATTTGAAGATCATGAAAGCAAACTATGTTCCTGCATTCTTAGTCCGCAAAGTCTTCACTCAGATATTCTCGTTTATTAACGTTCAACTATTCAACAGCCTTCTTTTGCGGCGCGAGTGTTGTTCGTTCAGCAATGGAGAGTATGTCAAAGCTGGCTTGTCTGAATTAGATCAATGGTGTTCTGGGGCAACTGAGGAATATGCAGGCTCGGCTTGGGACGAATTAAAGCATATTAGGCAGGCTGTTGGATTCCTTGTCATACATCAAAAACCGAAAAAGACGTTGAACGAGATAACTAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTATATAGGATCAGTACTATGTACTGGGATGACAAATACGGCACACATAGTGTATCCTCGGAAGTTATTTCGAGTATGCGAAAACTGATGACCGAAGACTCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGACTCTAGCATCCCATTTTCAGTGGATGACATCTCCAAATCAATGAAACAAGTAGACGTAACAGACATCGATCCTCCACCGCTGATACGCGAAAACTCAGGGTTCGGGTTTTTGCTTCAACGTGCAGAGTAG | 4590 | 42.61 | MSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEIHVRTTNGKTVVANISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLGDPKSFHYLNQSKCFELDGINDAHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNVEFAKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCSFARALFPPQPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKAKIFLRAGQMASLDAKRTEMLSNAARTIQMQIRTFIARKEFVALRKAAIQVQSFTRGVLARKLFEQLRQEAAALRIQKCFKRHVARKSYLDLLSSATTLQTGLRAMKARDEFRFRKRTKAAIIIQARWRCHMAYSYYTRLQKAALYTQCGWRRRVARKELRQLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEIAKLQDALHGMQLQVEEANAQVIKEREAAKKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKALLLSEKKTSEEARKACTDAEAKNVELAKKLQDADQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSVIIQRTPENGNIPHGEAKVSSDTTLALSTIREPESEEKPQKSLNEKQQENQDLLVKCITQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRIIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLSFLSSRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAIAQQALIAHWQSIVKSLNNYLKIMKANYVPAFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELDQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRKLMTEDSNNAISSFLLDDDSSIPFSVDDISKSMKQVDVTDIDPPPLIRENSGFGFLLQRAE | 1529 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3538325 | 3552013 | + | CmoCh11G007300.1 | Cmo11g00730 | 391349 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00730 | 1529 | ProSiteProfiles | IQ motif profile. | 783 | 812 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | CDD | MYSc_Myo11 | 76 | 720 | IPR036018 | - | |
Cmo11g00730 | 1529 | ProSiteProfiles | Myosin motor domain profile. | 62 | 732 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | ProSiteProfiles | IQ motif profile. | 758 | 787 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | ProSiteProfiles | Dilute domain profile. | 1162 | 1473 | IPR002710 | - | |
Cmo11g00730 | 1529 | Gene3D | Kinesin motor domain | 65 | 662 | IPR036961 | - | |
Cmo11g00730 | 1529 | PANTHER | MYOSIN-5 | 6 | 1525 | - | - | |
Cmo11g00730 | 1529 | Coils | Coil | 877 | 918 | - | - | |
Cmo11g00730 | 1529 | Pfam | DIL domain | 1349 | 1452 | IPR002710 | - | |
Cmo11g00730 | 1529 | Gene3D | - | 439 | 623 | - | - | |
Cmo11g00730 | 1529 | PANTHER | MYOSIN | 6 | 1525 | - | - | |
Cmo11g00730 | 1529 | Gene3D | - | 833 | 882 | - | - | |
Cmo11g00730 | 1529 | Gene3D | - | 786 | 832 | - | - | |
Cmo11g00730 | 1529 | Gene3D | - | 733 | 785 | - | - | |
Cmo11g00730 | 1529 | Gene3D | - | 667 | 730 | - | - | |
Cmo11g00730 | 1529 | ProSiteProfiles | IQ motif profile. | 831 | 857 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | Coils | Coil | 923 | 957 | - | - | |
Cmo11g00730 | 1529 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 785 | 883 | IPR027417 | - | |
Cmo11g00730 | 1529 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | SMART | iq_5 | 757 | 779 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | SMART | iq_5 | 805 | 827 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | SMART | iq_5 | 734 | 756 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | SMART | iq_5 | 782 | 804 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | SMART | iq_5 | 830 | 852 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | SMART | iq_5 | 853 | 875 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 601 | - | - | |
Cmo11g00730 | 1529 | Pfam | IQ calmodulin-binding motif | 832 | 851 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | Pfam | IQ calmodulin-binding motif | 759 | 778 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | Pfam | IQ calmodulin-binding motif | 737 | 755 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | Pfam | IQ calmodulin-binding motif | 785 | 803 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | SMART | DIL_2 | 1348 | 1455 | IPR002710 | - | |
Cmo11g00730 | 1529 | Coils | Coil | 996 | 1051 | - | - | |
Cmo11g00730 | 1529 | SMART | MYSc_2a | 56 | 733 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | Pfam | Myosin head (motor domain) | 64 | 720 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | ProSiteProfiles | IQ motif profile. | 735 | 764 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | CDD | MyosinXI_CBD | 1113 | 1495 | IPR037975 | GO:0007015 | |
Cmo11g00730 | 1529 | ProSiteProfiles | IQ motif profile. | 854 | 883 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | ProSiteProfiles | IQ motif profile. | 806 | 835 | IPR000048 | GO:0005515 | |
Cmo11g00730 | 1529 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 34 | 785 | IPR027417 | - | |
Cmo11g00730 | 1529 | Pfam | Myosin N-terminal SH3-like domain | 9 | 50 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo11g00730 | 1529 | Gene3D | - | 252 | 310 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00772 | Cmo11g00730 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00424 | Cmo-Chr5:1949703 | Cmo11g00730 | Cmo-Chr11:3538325 | 2.89E-51 | dispersed | |
Cmo11g00730 | Cmo-Chr11:3538325 | Cmo12g01162 | Cmo-Chr12:10512698 | 0 | dispersed | |
Cmo10g00772 | Cmo-Chr10:3574855 | Cmo11g00730 | Cmo-Chr11:3538325 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00730 | K10357 | - | csv:101204300 | 2828.12 |