Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00748 ATGGGCTCAATGGCAATTGTTGTTCTTGTTCTCGTTGTTCTTCTTGTTCTTCTTGTTCTTCATCCTTGTGTCTTCGTCGATGCCAAGACAACCTACATTGTTCGCATGAAACATCATGCTCTGCCTTCTGAGTATCCCACCCATCATCACTGGTACTCTGCCCACCTCCAATCCCTATCCTCCTCCGCCACCTCTGATTCCATTCTCTACGCCTACACTTCCGCCTACAATGGCTTCGCTGCTTCTCTCAATCCAGAGGAAGCCCAATTGCTTCGCCAATCGGATTCCATTCTGGGTGTCTATGAAGACTCTGTTTATAACCTTCACACCACTCGAACTCCGGGATTCCTCGGCCTCAACTCCGATTTCGGCTTCTGGGAAGGTCACAACACTCAGGATCTCCACCAGGCTTCTCATGATGTTATTATTGGGGTTATCGACACCGGGATTTGGCCGGAGTCTATGAGCTTTGATGACACTGGAATGCCGGAGATTCCATCGCGGTGGCGTGGAGAATGCGAATCAGGGCCCGATTTCCACCCTTCACTCTGTAACAAGAAACTAATCGGAGCTCGCAGCTTCTCGAAGGGTTATCAAATGGCTTCTAATGATGGGTACTTCGGAAATCCAAGAGAAAACCAGTCGCCTAGAGACCAGGATGGACACGGCACGCACACAGCAAGCACGGCTGCTGGGTCACATGTGGCTAACGCGAGCTTACTTGGGTATGCCAGAGGCATTGCCAGGGGGATGGCTCCTCAAGCGAGAGTTGCAGCTTACAAAACCTGTTGGTCCACTGGTTGCTTTGGATCTGACATTCTTGCAGGTATGGATCGGGCAATATCCGACGGTGTCGATGTACTCTCACTCTCTTTGGGCGGTGGCTCTGCACCTTATTACCAGGATACCATTGCAATAGGAGCATTTGCAGCCATGGAGAATGGGGTTTTTGTTTCGTGCTCAGCTGGGAACAGTGGGCCAAACTTGGCTTCTCTGGCTAATGTGGCACCTTGGATCATGACAGTCGGAGCTGGAACTCTAGACCGGGATTTCCCAGCTTATGTCCAACTAGGAAATGGCAAGCGGTTCACTGGAGTGTCGCTCTACAGTGGCCAAGGAATGAACAAGCCGGTGGGTTTGGTGTACAAAGAAGGAAGCAACACCTCCAGCAACATGTGTTTGCCCGGTTCTCTTGACCCGGAATTGATCAGAGGGAAAGTGGTGGTCTGCGACAGGGGAATCAACGCCAGAGCAGAGAAGGGAGGAGTGGTGCGAGATGCTGGTGGGTTTGGGATGATTCTGGCAAACACAGCTGCTAATGGAGAGAAATTGGTGGCTGACAGCCACTTGCTGCCGGCTGTGGCGGTGGGGAGAATAACCGGCGACATGATCCGGCATTATGTGCGGTCAGTTTCGAAGCCGACGGCGGTGCTAAGCTTTGGTGGGACAGTTGTGAACGTGCGCCCATCTCCAGTGGTGGCGGCTTTCAGTTCCCGAGGACCCAACTTGGTAACGCCCCAAATCCTAAAGCCGGACGTTATTGGGCCTGGCGTTAACATCTTGGCTGCCTGGTCTGAGTCCATTGGACCTACTGGATTGGACAGCGACAAGAGAAAAACACAGTTCAATATTATGTCAGGAACATCCATGTCTTGCCCACATATAAGCGGGCTGGCGGCATTGATGAAGGCAGCTCATCCGGAATGGAGTCCAAGTGCTATCAAATCTGCGTTAATGACCACTGCATACACGCAGGACAACACCAACTCATCTCTCCGGGATGCTGCCGGAGGGGCGTTTTCCAATCCATGGGGTCATGGAGCTGGCCATGTTGATCCACACAAAGCCCTCTCCCCAGGTCTTATATACGATATCTCGATCGATGACTACATTGCCTTCCTGTGTTCCTTGGACTATGGGATTGATCATGTTCAGGCAATTGTGAAGCAATCGAATGTAACGTGCTCCCGAAAGTTTGCAGACCCAGGACAACTTAACTACCCTACACTTTCAGTTGTGTTTGGGGGAAAGAGGGTGGTTCAATACACTCGTGAAGTCACGAATGTTGGGGCTGCAGGGTCGGTTTATGAAGTGGCTACTACTGCACCGTTGGCTGTGAATGTGATGGTGAAACCGTCAAGGCTTGTTTTCACTAAAGTTGGGGAGAAGAAAATGTACACTGTCACATTTGTGACAAGCGGGGATGCTGCTCAAACCGCAAGATATGGGTTTGGATCGATTGTGTGGAGCAATGATCTACACGTAGTCAGAAGTCCAGTGGCTTTCACCTGGACAAGGTTGTGA 2304 51.13 MGSMAIVVLVLVVLLVLLVLHPCVFVDAKTTYIVRMKHHALPSEYPTHHHWYSAHLQSLSSSATSDSILYAYTSAYNGFAASLNPEEAQLLRQSDSILGVYEDSVYNLHTTRTPGFLGLNSDFGFWEGHNTQDLHQASHDVIIGVIDTGIWPESMSFDDTGMPEIPSRWRGECESGPDFHPSLCNKKLIGARSFSKGYQMASNDGYFGNPRENQSPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWSTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYQDTIAIGAFAAMENGVFVSCSAGNSGPNLASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMNKPVGLVYKEGSNTSSNMCLPGSLDPELIRGKVVVCDRGINARAEKGGVVRDAGGFGMILANTAANGEKLVADSHLLPAVAVGRITGDMIRHYVRSVSKPTAVLSFGGTVVNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDSDKRKTQFNIMSGTSMSCPHISGLAALMKAAHPEWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWGHGAGHVDPHKALSPGLIYDISIDDYIAFLCSLDYGIDHVQAIVKQSNVTCSRKFADPGQLNYPTLSVVFGGKRVVQYTREVTNVGAAGSVYEVATTAPLAVNVMVKPSRLVFTKVGEKKMYTVTFVTSGDAAQTARYGFGSIVWSNDLHVVRSPVAFTWTRL 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3648131 3651087 + CmoCh11G007480.1 Cmo11g00748 391367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00748 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 764 IPR045051 -
Cmo11g00748 767 Pfam Subtilase family 139 588 IPR000209 GO:0006508|GO:0008236
Cmo11g00748 767 Pfam Fibronectin type-III domain 664 761 IPR041469 -
Cmo11g00748 767 Gene3D - 348 485 - -
Cmo11g00748 767 SUPERFAMILY Protease propeptides/inhibitors 30 107 - -
Cmo11g00748 767 Gene3D - 634 764 - -
Cmo11g00748 767 PANTHER CUCUMISIN-RELATED 21 764 - -
Cmo11g00748 767 CDD PA_subtilisin_like 354 476 - -
Cmo11g00748 767 SUPERFAMILY Subtilisin-like 108 621 IPR036852 GO:0004252|GO:0006508
Cmo11g00748 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 109 IPR037045 -
Cmo11g00748 767 Pfam PA domain 393 462 IPR003137 -
Cmo11g00748 767 ProSiteProfiles Serine proteases, subtilase domain profile. 105 617 - -
Cmo11g00748 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Cmo11g00748 767 MobiDBLite consensus disorder prediction 205 229 - -
Cmo11g00748 767 CDD Peptidases_S8_3 106 583 IPR034197 -
Cmo11g00748 767 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Cmo11g00748 767 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cmo11g00748 767 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Cmo11g00748 767 Pfam Peptidase inhibitor I9 31 109 IPR010259 -
Cmo11g00748 767 Gene3D Peptidase S8/S53 domain 140 630 IPR036852 GO:0004252|GO:0006508
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00800 Cmo11g00748 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01758 Cmo-Chr2:10060905 Cmo11g00748 Cmo-Chr11:3648131 0 dispersed
Cmo11g00748 Cmo-Chr11:3648131 Cmo16g00173 Cmo-Chr16:786400 0 dispersed
Cmo19g00130 Cmo-Chr19:750735 Cmo11g00748 Cmo-Chr11:3648131 0 dispersed
Cmo10g00800 Cmo-Chr10:3726208 Cmo11g00748 Cmo-Chr11:3648131 0 wgd
Cmo11g00748 Cmo-Chr11:3648131 Cmo17g00660 Cmo-Chr17:6842754 0 wgd
Cmo11g00748 Cmo-Chr11:3648131 Cmo08g00775 Cmo-Chr8:4887730 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00748 - - csv:101209781 1314.67