Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00753 ATGGGTCTCCAGTGTCACTTGGAAGTATTGAAACCATTCATTCGCCGCCTCTTTTCTGTCATTTCACCGGTAACCATAATGGCTTGCGATCCGAACAATGGCGGTGAAATCGGAGCGGAAAATTCTCTCCAATCCATCTGTTACAAACGTGGATCCTTGCGGCTGCTCGATCAGAGGAAGCTTCCTTTGGAAACTCGTTACCTGGACATCAAGGATTCAAAAGATGGATGGCATGCCATAAGGGATATGGTAGTACGCGGGGCGCCTGCCATAGCTATTGCAGCAGCCCTTGCTTTGGCAGCAGAAGTGTACAACTTGGACGCTTTTAATGGGAGTCCCAACGACGCAGCTTCGTTCATTGCGGAGAAATTGGACTACTTAGTCTCCAGTCGGCCAACTGCGGTTAATCTTGGGGACGCTGCTATAAAACTTAAAGAAATTGTATCTCGGGCCGTCGCTATTTCTCCTGATGCCAAGAGTGTCTTTCAAGCATATATTGAGGCTGCTGAAGCGATGCTGGAGGACGACGTTGCTTCAAATAAAGCCATTGGGTCGTATGGAGCAACGTATATCCGTGATCAACAAAAATCATTGGCAAAACTTTCCGTTCTAACGCATTGCAACACGGGCAGTCTAGCAACGGCTGGATATGGTACTGCCCTGGGTGTAATCCGTGCTCTTCACTCCGCTGATGTGTTAGAAAGGACATACTGTACCGAAACACGACCCTTCAATCAAGGATCTCGACTGACGGCCTATGAGTTGGTCCATGAAAAGATACCTTCTACCCTGATAGCAGATTCGGCTGCAGCAGCCTTGATGAAATCTGGAAGGGTGAATGCTGTTGTAGTTGGGGCCGATCGCGTAGCCGCAAACGGTGACACTGCTAATAAGATTGGAACCTATAGCCTTGCATTGTGTGCAATGCACCACAACATTCCATTCTTTGTGGCTGCACCATTGACTTCCATAGACTTATCCCTTTCATCTGGCGAAGAAATCGTTATCGAGGAAAGGTCCCCCAAAGAGTTGTTGAATGCCCGTGGAGGGCTCGGCGAGCAAGTTGCTGCTTCTGGCATCGATGTCTGGAACCCCGCTTTTGATGTTACTCCTGCTCATCTGATCTCGGGAATCATTACAGAAAAGGGTGTCATCACGAAGGTGGGTTCTGAAGATTTCAACGTAAAGGAGTTTGTTCAAAAGATTGCAGCAGGCACTCTTGCGCAGGTACACTAG 1236 48.38 MGLQCHLEVLKPFIRRLFSVISPVTIMACDPNNGGEIGAENSLQSICYKRGSLRLLDQRKLPLETRYLDIKDSKDGWHAIRDMVVRGAPAIAIAAALALAAEVYNLDAFNGSPNDAASFIAEKLDYLVSSRPTAVNLGDAAIKLKEIVSRAVAISPDAKSVFQAYIEAAEAMLEDDVASNKAIGSYGATYIRDQQKSLAKLSVLTHCNTGSLATAGYGTALGVIRALHSADVLERTYCTETRPFNQGSRLTAYELVHEKIPSTLIADSAAAALMKSGRVNAVVVGADRVAANGDTANKIGTYSLALCAMHHNIPFFVAAPLTSIDLSLSSGEEIVIEERSPKELLNARGGLGEQVAASGIDVWNPAFDVTPAHLISGIITEKGVITKVGSEDFNVKEFVQKIAAGTLAQVH 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3663689 3668447 - CmoCh11G007530.1 Cmo11g00753 391372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00753 411 Gene3D - 234 399 IPR042529 -
Cmo11g00753 411 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 41 399 - -
Cmo11g00753 411 SUPERFAMILY NagB/RpiA/CoA transferase-like 42 387 IPR037171 -
Cmo11g00753 411 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 44 387 IPR005251 -
Cmo11g00753 411 Gene3D - 41 233 IPR027363 -
Cmo11g00753 411 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 70 387 IPR011559 GO:0044249
Cmo11g00753 411 Pfam Initiation factor 2 subunit family 85 386 IPR000649 GO:0044237
Cmo11g00753 411 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 41 399 - -
Cmo11g00753 411 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 43 396 IPR005251 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00337 Cmo-Chr8:2086898 Cmo11g00753 Cmo-Chr11:3663689 6.07E-06 dispersed
Cmo11g00753 Cmo-Chr11:3663689 Cmo15g00850 Cmo-Chr15:4301204 8.48E-16 dispersed
Cmo10g00805 Cmo-Chr10:3742918 Cmo11g00753 Cmo-Chr11:3663689 3.20E-20 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00753 K08963 - csv:101210526 646.351