Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00770 | ATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTAAAGGTCACGGGAAGGGCCAACTTATTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAA | 705 | 44.54 | MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3762072 | 3765690 | + | CmoCh11G007700.1 | Cmo11g00770 | 391389 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00770 | 234 | SUPERFAMILY | Winged helix DNA-binding domain | 137 | 231 | IPR036390 | - | |
Cmo11g00770 | 234 | Pfam | CSN8/PSMD8/EIF3K family | 67 | 193 | IPR033464 | - | |
Cmo11g00770 | 234 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K | 8 | 234 | - | - | |
Cmo11g00770 | 234 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 | 8 | 234 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo11g00770 | 234 | SUPERFAMILY | ARM repeat | 10 | 135 | IPR016024 | - | |
Cmo11g00770 | 234 | Hamap | Eukaryotic translation initiation factor 3 subunit K [EIF3K]. | 8 | 234 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo11g00770 | 234 | Gene3D | - | 128 | 232 | IPR036388 | - | |
Cmo11g00770 | 234 | Gene3D | ARM repeat; domain 1 | 8 | 125 | IPR016020 | GO:0003743|GO:0005852|GO:0006446|GO:0043022 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00822 | Cmo11g00770 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00822 | Cmo-Chr10:3851664 | Cmo11g00770 | Cmo-Chr11:3762072 | 2.18E-165 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00770 | K15028 | - | csv:101214255 | 449.899 |