Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00770 ATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTCGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACACAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTAAAGGTCACGGGAAGGGCCAACTTATTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATTACTCGCATCTTTCCAATTCTCGGCTAA 705 44.54 MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3762072 3765690 + CmoCh11G007700.1 Cmo11g00770 391389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00770 234 SUPERFAMILY Winged helix DNA-binding domain 137 231 IPR036390 -
Cmo11g00770 234 Pfam CSN8/PSMD8/EIF3K family 67 193 IPR033464 -
Cmo11g00770 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 8 234 - -
Cmo11g00770 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 8 234 IPR009374 GO:0003743|GO:0005737|GO:0005852
Cmo11g00770 234 SUPERFAMILY ARM repeat 10 135 IPR016024 -
Cmo11g00770 234 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 234 IPR009374 GO:0003743|GO:0005737|GO:0005852
Cmo11g00770 234 Gene3D - 128 232 IPR036388 -
Cmo11g00770 234 Gene3D ARM repeat; domain 1 8 125 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00822 Cmo11g00770 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00822 Cmo-Chr10:3851664 Cmo11g00770 Cmo-Chr11:3762072 2.18E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00770 K15028 - csv:101214255 449.899