Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00806 | ATGGATTTTCAGGTGGTGGTCTTAGCCGGCGGCACTTCGAAGAATCTCGTTCCTATTGTTTCCAAGGAGCTTCCCAAGGCATTACTGCCGGTGGCGAATCGTCCGGTCCTCTCGTACGTTTTGGAGCTCTTAGAACTCAGTAACCTTAAGGATCTCATTGTTGTCGCTGAAGGTGAAGATGTGGCTCTTCATATTGGAAGTTGGATATCAGGGGCTTATGATGGTCGTCTACGTGTAGAGGTTACTTCTGTACCAGAAGATGTTGGAACCGTGGGTGCACTTCGGGCCGTTGCTCACCATTTGACAGCAAATGATATTTTGGTTGTGAGTGGTGATCTTGTTTCTGATGTTCCTCCTGGTGCAGTTGCAGCTCTGCATAGACGACATGATGCTGTCGTTACTGCTATGCTCTGCTCTGTTCCAGTCAGTGGACCTTCAGAGTCTGGATCCTCTGGTGGAAAAGATAAGACCAAAAAAGCAGTAGTCCACAATATTGTTGGACTTGATCCTACCAAGGAGTTTTTACTATATATAGCGACAGCTGCTGAAGTTGAGAAAGACTATAAAATTCAGAAGAGCATACTCCGTGCAGTTGGCCAGATGGATATCCGAACTGATCTCATGGATGCGTATATGTATGCGTTCAAAAGATCTGCTTTGCAAGAAGTTCTAGATCAAAAAGAAAATTTCCGAAGCTTAAGACAAGACGTGTTGCCCTATCTTGTGCGGAGCCAGTTGAGGTCCGAAGTTTTATCAAACGGAACGCCACAAGCGGAAGAAAATGGGAGTGAGAAGGTTGGTTCCCACAAGAACAAAGCCTTGCTTTCACGGATCCTCTCTAATTCATCTACTACAAGTTTTCATGATCTTCATGCATATGGCACTAATGAATCTATTCCTGTTCGAAAAACGCATAAATGCTGTGTTTATATTCCCGCTAGTAGCAAGTATTGTGCTCGCTTATATTCAATTCAAGCATACAGCGACATTAATCGGGATGTTATTGGAGAGGCAAGCCATCTTTCAGGTTACTCATTCTCTGCTCAAAATAACATCATTCATCCTTCAGCACAACTCGGATCAAAATCCACCGTCGGACCCCATTGTATGTTAGGAGAAGGTTCACAGATGGGTGACAAATGTAGCGTGAAACGCTCAGTCATTGGCCGCCATTGCCGGATAGGTTCCAATGTGAAGATTGCCAATTCCGTCGTCATGGATCATGTTACCATTGGAGATGGTTGTTCAATTCAAGGTTCGGTTATCTGCAGCAACGTACAACTTCAGGAGCGCGCCGTTTTGCGAGATTGTCAAGTAGGAGCAGGTTTTGTGGTGACTGCTGCCTGTGAGTACAAAGGCCATTGCACTGTTCGCCCGCCGCTCCTGCCCGACGCGGTCCCAGCCGCCGCCCCCCCCGTACGCTGCAATCTCAGCCTTCGACGGACTCGCCGCTGCTCCCTCCCTCCCTCTTACACTCTTTCGCCTCTCCGAGCAATCAGAGTTTCTTGTTTCTGTTTGCCCCTAACCCTTACCGTTGGTGAGATTGCGCTGCCGCTCAGTTTAAGGATCACCCCCGAGAAACAGTTCAAAACGCAGCTCCTACGCTTTTGCAAAATCGCACGCAACTGCTGGTCTTTCTCAGAACTAGGTAAAATGGGTGATCTGGAAACTCAAAGAATTAGAAACATATGTATATTAGCACATGTTGACCATGGCAAAACGACGCTTGCCGACCATCTTATTGCCTCCTCAGGGGGTGGTTTGATCCACCCGAAGATGGCAGGCCGCCTCCGTTTCATGGATTATCTTGATGAGGAACAAAGGAGGGCGATTACTATGAAGAGCTCTTCGATTGGTCTACGGTACAAGGAATACTCCATAAACCTCATTGATTCGCCTGGCCATATGGATTTTTGCAGTGAAGTGTCGACTGCTGCTAGATTGAGTGATGGGGCATTGGTTTTAGTTGATGCTGTGGAGGGTGTGCACATTCAAACCCATGCTGTTTTGCGACAGGCTTGGATTGAGAAGCTTACGCCATGTTTGGTTCTTAATAAGATCGATAGATTGATATGTGAGTTGAAGTTGAGTCCTATGGAGGCGTATACTCGTTTGTTGAGGATTGTTCATGAAGTTAATGGGATAATGAGTGCGTACAAGTCTGAGAAATATTTGTCTGATGTGGATTCAATACTTGCAAGCTCTACAGGTGAGGTAAATGATGAGAACCTCGAGTTAATTGAGGATGACGAGGAAGATACATTTCAACCCCAGAAAGGGAATGTTGTGTTTGTGTGTGCGTTAGACGGGTGGGGATTTAGCGTTAATGAGTTCGCTGAATTTTATGCTTCAAAGCTTGGGGCAAATGTATCTGCATTGAAGAAGGCCTTGTGGGGTCCTCGGTATTTTAATGCAAAGACGAAGATGATTGTTGGAAAGAAGGCCTTGGCGGGAGGAAGTAAAGCTCGACCTATGTTTGTTCAATTTGTGCTTGAAAGACTTTGGGAAGTTTATGGGGCTGCTCTAGAAACTGATGGGAATAAGGAGGTGCTTCAAAAGGTTAATAGCACGTTTAATTTGAATATACCAGCTCGAGAACTTTCTAACAAGGATCCAAAGGTGGTTCTTAATGCTATTATGAGTCGTTGGCTTCCTCTTTCAAATGCAATATTATCAATGGTTGTTAACTGTATGCCTGACCCAATTGCTGCACAATCATTTCGAATATCACGGTTGCTTCCAAAGAGGGATGTCATTGATGCTGAAGTTGATGTCAATGTGCTAACCGGGGCAGATCTTGTCAAGAAATCCATTGAAACTTGTGATACGAGGCCTGAGGCTCCATTTGTTGCTTTTGTATCCAAGATGTTTGCAGTGCCAGTTAAAATGCTTCCAAGGAGGGACGATCATGGCGGGACTACTAATATTTCATCTGATGATGGTGGCGATGGTGAATCAGACGAGTGTTTCCTCGCATTTGCAAGGATATTTAGTGGGGTTCTTTATTCTGGACAGAGAGTGTTCGTGCTTTCAGCTTTATATGACCCAACGAAAGGGGAATCGATGCAAAAGCACATTCAGGAGGTTGAGCTGCATTCATTTTATCTAATGATGGGCCAAGGCTTGAAACCAGTGACCTCCGTAAAAGCAGGAAACCTTTTAGCAATTCGTGGTCTTAGCCATCACATACTGAAAAGTGCAACTCTTTCATCCACAAGAAATTGCTGGCCTTTCTCAAGTATGGCATTCCAGGTTGCTCCAACTCTGAGGGTTGCACTCGAGCCATCTGATCCTGGAGACATAGGTGCCTTATTGAAAGGTTTAAGGCTTTTAAATCGAGCAGACCCTTTTGTAGAGGTAACTGTTTCATCTCGAGGAGAACATGTACTTGCTGCAGCTGGAGAAGTCCATCTTGAGAGATGCATAAAGGATTTGAAGGAGAGGTTTGCCAGGGTAAGCTTGGAGGTCTCTCCACCTCTTGTATCTTATAAAGAAACAATTGAAGGCGAGGCATCTAGTGTGTCGGATTATTTTAAAGTGTTATCTGAAAGCACGGAGTGTGTCGTTAAGAAAACCCCAAATGGTAGATGTGTTGTCAGAGTGCAGGTACTAAAACTTCCACTTGCTCTAGCTAAAGTACTTGATGAAAATTCTGGTGTTCTGGGCGATATTATTGGCGTCAAGCTGGGGCAAAGCTATAAAAACTTGGAAACAAAGAGATCGACTTTGAGGGAAAATGAGAATCCAGCAGAAACATTAAAGAAACTCATATCGGATGCAGTGTGTAGCGATGTATCGTCGAAGGATGACAAACATAATGCACAGTGGTCAAAGCTTCTTCGGCGAATTTGGGCACTTGGACCACAGCAGATTGGTCCTAACATTCTGATTAACCCAGATCCTAAAGTAAATGATTCTGATTGCTCTGTTCTTATTCGGGGTTCATCTCATGCATCACAGAGACTGGGTTTTGTGGACGGTTCTTCAAATGATGATTTGGATGCTGAAACATCGTCGGTAAGTGATGTTGCTTCTGTAGCATCATCAGAAGGAGCTCAGACATTAAGCATGGAAGCAGCATCTCTTGAGAACAGTGTTCTATCTGGGTTTCAGCTTGCTACATCAGCTGGGCCCTTATGTGATGAACCTCTGTGGGGGTTGGCGTTTATTGTCGAGGCTTCTATTTCTTCATTGCCTGGGAATTCAGATGAGTCCGAACCTCCCTTTCAATCAGAGAATAACGCTATCTTTTCTGGGCAAGTTATGGCAGCTGTAAAGGATGCCTGTAGAGCAGCTGTACTTCAAAAGAAACCTCGGCTTGTCGAAGCCATGTACTTCTGTGAATTGAACACTCCCACCGAGTATTTGGGTCCAATGTATGCTGTACTTGCTCGAAGGCGAGCCCGGGTTTTGAAAGAAGAAATGCAGGAAGGTTCACCTTTGTTTACTGTGCACGCATATGTGCCAGTTTCAGAGAGCTTTGGTTTTGCAGATGAGTTAAGGAGGTGGACTTCTGGAGCTGCAAGTGCTCTTCTAGTGCTTAGCCACTGGGAAGAACTATGTGAAGATCCGTTCTTCGTCCCGAAGACGGAAGAAGAAATTGAAGAGTTCGGAGATGGTTCTAGCGTGCTTCCCAACACAGCCAGAAAGCTCATTGATACTGTAAGACGGCGTAAGGGTCTTCCTGTGGAAGAAAAAGTTGTGCAGCATGCTACAAAGCAGAGAACACGTGCTCGAAAAATTCCTGCTTACATGAGAGATTTGTATTCGGCCTGGTCCATCTGGAGTTCGCTCCCTGACATGGCCATCCGGGACGTCGTGAAGCTTGGACGACGACACCCTTACCAGCCTGAAAGGGTGACTGACTGGAGGAGGAAAAGGGTCCTTGGAAGCTTGCTGCAAATATGGTTGTGTCACTTGGATCTTGTGAAGGTGGCTGCGGAGGTAAGTACATGTCATGGCCCTCATAGCCACTGA | 4977 | 45.49 | MDFQVVVLAGGTSKNLVPIVSKELPKALLPVANRPVLSYVLELLELSNLKDLIVVAEGEDVALHIGSWISGAYDGRLRVEVTSVPEDVGTVGALRAVAHHLTANDILVVSGDLVSDVPPGAVAALHRRHDAVVTAMLCSVPVSGPSESGSSGGKDKTKKAVVHNIVGLDPTKEFLLYIATAAEVEKDYKIQKSILRAVGQMDIRTDLMDAYMYAFKRSALQEVLDQKENFRSLRQDVLPYLVRSQLRSEVLSNGTPQAEENGSEKVGSHKNKALLSRILSNSSTTSFHDLHAYGTNESIPVRKTHKCCVYIPASSKYCARLYSIQAYSDINRDVIGEASHLSGYSFSAQNNIIHPSAQLGSKSTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKIANSVVMDHVTIGDGCSIQGSVICSNVQLQERAVLRDCQVGAGFVVTAACEYKGHCTVRPPLLPDAVPAAAPPVRCNLSLRRTRRCSLPPSYTLSPLRAIRVSCFCLPLTLTVGEIALPLSLRITPEKQFKTQLLRFCKIARNCWSFSELGKMGDLETQRIRNICILAHVDHGKTTLADHLIASSGGGLIHPKMAGRLRFMDYLDEEQRRAITMKSSSIGLRYKEYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLICELKLSPMEAYTRLLRIVHEVNGIMSAYKSEKYLSDVDSILASSTGEVNDENLELIEDDEEDTFQPQKGNVVFVCALDGWGFSVNEFAEFYASKLGANVSALKKALWGPRYFNAKTKMIVGKKALAGGSKARPMFVQFVLERLWEVYGAALETDGNKEVLQKVNSTFNLNIPARELSNKDPKVVLNAIMSRWLPLSNAILSMVVNCMPDPIAAQSFRISRLLPKRDVIDAEVDVNVLTGADLVKKSIETCDTRPEAPFVAFVSKMFAVPVKMLPRRDDHGGTTNISSDDGGDGESDECFLAFARIFSGVLYSGQRVFVLSALYDPTKGESMQKHIQEVELHSFYLMMGQGLKPVTSVKAGNLLAIRGLSHHILKSATLSSTRNCWPFSSMAFQVAPTLRVALEPSDPGDIGALLKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCIKDLKERFARVSLEVSPPLVSYKETIEGEASSVSDYFKVLSESTECVVKKTPNGRCVVRVQVLKLPLALAKVLDENSGVLGDIIGVKLGQSYKNLETKRSTLRENENPAETLKKLISDAVCSDVSSKDDKHNAQWSKLLRRIWALGPQQIGPNILINPDPKVNDSDCSVLIRGSSHASQRLGFVDGSSNDDLDAETSSVSDVASVASSEGAQTLSMEAASLENSVLSGFQLATSAGPLCDEPLWGLAFIVEASISSLPGNSDESEPPFQSENNAIFSGQVMAAVKDACRAAVLQKKPRLVEAMYFCELNTPTEYLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEELCEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDTVRRRKGLPVEEKVVQHATKQRTRARKIPAYMRDLYSAWSIWSSLPDMAIRDVVKLGRRHPYQPERVTDWRRKRVLGSLLQIWLCHLDLVKVAAEVSTCHGPHSH | 1658 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3985363 | 3999338 | + | CmoCh11G008060.1 | Cmo11g00806 | 391425 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00806 | 1658 | Gene3D | - | 1438 | 1573 | - | - | |
Cmo11g00806 | 1658 | Gene3D | Translation factors | 901 | 1084 | - | - | |
Cmo11g00806 | 1658 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 556 | 899 | IPR027417 | - | |
Cmo11g00806 | 1658 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 1161 | 1441 | IPR020568 | - | |
Cmo11g00806 | 1658 | CDD | EF2_II | 948 | 1072 | - | - | |
Cmo11g00806 | 1658 | SUPERFAMILY | EF-G C-terminal domain-like | 1085 | 1159 | IPR035647 | - | |
Cmo11g00806 | 1658 | SMART | EFG_C_a | 1439 | 1528 | IPR000640 | - | |
Cmo11g00806 | 1658 | Pfam | Elongation factor Tu GTP binding domain | 559 | 897 | IPR000795 | GO:0003924|GO:0005525 | |
Cmo11g00806 | 1658 | PRINTS | GTP-binding elongation factor signature | 680 | 689 | IPR000795 | GO:0003924|GO:0005525 | |
Cmo11g00806 | 1658 | PRINTS | GTP-binding elongation factor signature | 562 | 575 | IPR000795 | GO:0003924|GO:0005525 | |
Cmo11g00806 | 1658 | PRINTS | GTP-binding elongation factor signature | 628 | 638 | IPR000795 | GO:0003924|GO:0005525 | |
Cmo11g00806 | 1658 | PRINTS | GTP-binding elongation factor signature | 608 | 616 | IPR000795 | GO:0003924|GO:0005525 | |
Cmo11g00806 | 1658 | PRINTS | GTP-binding elongation factor signature | 644 | 655 | IPR000795 | GO:0003924|GO:0005525 | |
Cmo11g00806 | 1658 | Gene3D | - | 553 | 778 | IPR027417 | - | |
Cmo11g00806 | 1658 | CDD | EF2 | 561 | 783 | - | - | |
Cmo11g00806 | 1658 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 4 | 425 | IPR029044 | - | |
Cmo11g00806 | 1658 | Gene3D | Hexapeptide repeat proteins | 326 | 453 | - | - | |
Cmo11g00806 | 1658 | CDD | eEF2_snRNP_like_C | 1442 | 1520 | - | - | |
Cmo11g00806 | 1658 | Gene3D | Yeast translation eEF2 (G' domain) | 779 | 884 | - | - | |
Cmo11g00806 | 1658 | PANTHER | - | 556 | 1580 | - | - | |
Cmo11g00806 | 1658 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 558 | 790 | IPR000795 | GO:0003924|GO:0005525 | |
Cmo11g00806 | 1658 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1 | 276 | IPR029044 | - | |
Cmo11g00806 | 1658 | Pfam | Elongation factor G C-terminus | 1440 | 1523 | IPR000640 | - | |
Cmo11g00806 | 1658 | CDD | EF2_snRNP_III | 1087 | 1158 | - | - | |
Cmo11g00806 | 1658 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 556 | 1580 | - | - | |
Cmo11g00806 | 1658 | SUPERFAMILY | Translation proteins | 939 | 1081 | IPR009000 | - | |
Cmo11g00806 | 1658 | SUPERFAMILY | EF-G C-terminal domain-like | 1442 | 1540 | IPR035647 | - | |
Cmo11g00806 | 1658 | CDD | aeEF2_snRNP_like_IV | 1158 | 1446 | - | - | |
Cmo11g00806 | 1658 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 1085 | 1162 | - | - | |
Cmo11g00806 | 1658 | CDD | LbH_eIF2B_gamma_C | 370 | 447 | - | - | |
Cmo11g00806 | 1658 | Pfam | MobA-like NTP transferase domain | 5 | 135 | IPR025877 | - | |
Cmo11g00806 | 1658 | Gene3D | - | 1182 | 1436 | IPR014721 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00806 | Cmo-Chr11:3985363 | Cmo20g00275 | Cmo-Chr20:1342518 | 1.35E-132 | dispersed | |
Cmo12g01115 | Cmo-Chr12:10188749 | Cmo11g00806 | Cmo-Chr11:3985363 | 1.05E-15 | dispersed | |
Cmo10g01045 | Cmo-Chr10:5504877 | Cmo11g00806 | Cmo-Chr11:3985363 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00806 | K14536 | - | csv:101220903 | 1813.51 |