Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00813 ATGGCCGAGGTTATGAACATGGCCGCCACCGCCACCGCCGCCGACGAGTCGTTGGACCGCCGTCGCGATCGTCAAGAGAAATCGTCTGAGGAGCAACCTCAATCATCTCCGCCGCCACCGCCTCCGCAGCCAGTTGCTGCTGCTCCTCCTCCTTCCAGAAGACGGGATAGAGATGAGAGAGATAGGAGAGACGATCGGGACGCTGATCGACCTCCGAACCGACGCGGCGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGGGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGTAGACATTCGCCTCCTAGACGGTCTCCTCCGCCACCTTACAAGCGTTCAAGGAGGGACGATGGTGGCTATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGTTATGATTATGGTGGGGGATACGAGCGGGAAATGCGTGGCCGGCCTGGATATGTTGACGAAAGATCTCTTGGCCGGTACAGTGGTCGTTCATCTGGTGGCTATCAAGATTGGGATTCTAATCGTGGTGGGCATGGCGATCCATTCAATGCAGGAGCTGGCCCAAGAGAAGGCTTGATGACATACAAGCAATTTATTCAAGAGCTTGAAGATGATATACTTCCTGCTGAAGCAGAACGCAGATATCAAGAATACAAGTCAGAGTATATTACAACACAGAAACAAGCCTTTTTTGATTCTCATAAAGATGAAGAATGGTTGAGAGATAAATATCATCCTACCAACCTAGTTACTGTCATCGAAAGGAGGAATGAGCTTGCACAAAGAACTGCCAAGGACTTTTTGCTTGATCTGCAAAGTGGAACACTGGAGCTAGGTCCTGGGATCAATGTAGCAGCGACAAATAAATCCGGGCAGACTAGTGAACCAAATTCAGATGATGAAGGAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCCAAAGAATTGGATCTTCTTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCGGAACCAAGACGGATTCAAATTGACATTGAACAAGCTCAAGCTCTTGTTCGTAAACTTGATGCTGAAAAGGGAATAGAAGAAAATATTTTGTGTGGTTCAGGTCGGGACAAAACGCATGGTGGCTCCTCCGGCATAGTCATAATCATACGAGGGTTAACGACTGTCAAAGGCTTGGAGGGTGTTGAGCTACTTGACACGCTTCTCACATATCTTTGGCGCATCCATGGCTTAGATTACTATGGAATTGTTGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGAAAGACCTCTAACATGGCTGGTGGTGCAGATGAGTGGGAGAAGAAACTTGACTTGCGTTGGCAAGAGAGATTGAGAGGTCAAGATCCGTTGGAAGCAATGACTGCCAAGGATAAAATAGAGGCTGCTGCTTTTGAATCTTTTGATCCATATGTTCGTAAGATAAGAGATGAAAAATATGGTTGGAAGTATGGCTGTGGAGCCAAGGGCTGTACTAAGCTGTTTCATGCCCCTGAGTTTGTGCATAAGCATCTTAACTTGAAACACCCAGAGCTTGTGATGGAGCTGACTTCAAAAGTGCGTGAAGAGCTGTATTTCCAAAATTACATGAATGATCCAGATGCTCCTGGAGGGACACCTGTTATGCAGCAATCACTTCCGAAGGACAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGATAGAGGCAATCGCAGGGACCGCGATAGTTGGGCCAATGGGGTTGACAGACTTGATAGATCTGAGAACCCACAATCAAGTGATTTTCAATCATCAAATGATGGTGCGGATGGTGGAAACCTTGATGATCCTATGTTTGATACTTTTGGAGGCCAAGGCAGACATGTTGCTCCATTTGCCTCTGAAATGCCGCCGCCAGTGCTTATGCCGGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCACCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGTCCACCTCCGTTTGAGGTTGGTGGTAGAAATGGAAGGCCAGGATCTCAATTAGGTGGATCTGCTCCAATTCTTGCCCTATCTCCAGGTTTTCGACAGGATCCACGCCGAATACGGAGTTATCAAGACCTAGATGCACCGGAGGACGAAGTCACCGTAATAGATTATAGAAGCTTGTAG 2262 48.45 MAEVMNMAATATAADESLDRRRDRQEKSSEEQPQSSPPPPPPQPVAAAPPPSRRRDRDERDRRDDRDADRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERSLGRYSGRSSGGYQDWDSNRGGHGDPFNAGAGPREGLMTYKQFIQELEDDILPAEAERRYQEYKSEYITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLELGPGINVAATNKSGQTSEPNSDDEGDNDGKRRRHGRGPAKELDLLSAAPKAHPVSSEPRRIQIDIEQAQALVRKLDAEKGIEENILCGSGRDKTHGGSSGIVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGIVETREAKGLRHVREEGKTSNMAGGADEWEKKLDLRWQERLRGQDPLEAMTAKDKIEAAAFESFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDPDAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDSWANGVDRLDRSENPQSSDFQSSNDGADGGNLDDPMFDTFGGQGRHVAPFASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEVGGRNGRPGSQLGGSAPILALSPGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL 753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4031605 4039873 - CmoCh11G008130.1 Cmo11g00813 391432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00813 753 MobiDBLite consensus disorder prediction 701 728 - -
Cmo11g00813 753 Pfam Arsenite-resistance protein 2 454 656 IPR007042 -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 1 208 - -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 324 341 - -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 563 650 - -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 582 614 - -
Cmo11g00813 753 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 49 753 - -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 160 177 - -
Cmo11g00813 753 Pfam SERRATE/Ars2, N-terminal domain 220 301 IPR021933 -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 306 361 - -
Cmo11g00813 753 ProSitePatterns Zinc finger C2H2 type domain signature. 520 543 IPR013087 -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 15 30 - -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 33 49 - -
Cmo11g00813 753 MobiDBLite consensus disorder prediction 51 142 - -
Cmo11g00813 753 PANTHER ARSENITE-RESISTANCE PROTEIN 2 49 753 IPR039727 GO:0006397
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01033 Cmo-Chr10:5431760 Cmo11g00813 Cmo-Chr11:4031605 0 transposed
Cmo10g01032 Cmo-Chr10:5427496 Cmo11g00813 Cmo-Chr11:4031605 3.65E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00813 - - csv:101219335 1172.53