Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00827 ATGACACAAGTTGAGGAGTTATGGGAACGCTTAGTTCGAGCTGCCTTAAGAAGAGATAGAATTGGTTTTGATGCATATGGACGCCCTGAAAGTGGCATTGCTGGAAATGTACCATCTTCACTTGCAAACAATAGGGATATTGATGAAATCTTGAGAGCTGCAGATGAAATCCAAGATGAAGATCCCAATGTTGCGAGAATATTATGTGAGCATGCATATTCGCTTGCGCAAAACCTGGATCCGAATAGTGAAGGGAGAGGTGTTTTGCAATTCAAAACTGGTTTGATGTCTGTAATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAATAATAGATAGAAGGCAGGACGTTACTCGGTTACAAGAGTTCTACAGACTATACCGAGAGAAAAATAATGTAGATAAGCTTCGGGAAGATGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGGTAACCTTGGAGAGTAA 468 41.24 MTQVEELWERLVRAALRRDRIGFDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE 155
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 4154334 4159273 - CmoCh11G008270.1 Cmo11g00827 391446
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00827 155 Gene3D - 33 147 IPR023175 -
Cmo11g00827 155 PANTHER CALLOSE SYNTHASE 9 1 151 - -
Cmo11g00827 155 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 151 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00827 Cmo-Chr11:4154334 Cmo11g00052 Cmo-Chr11:215531 5.21E-56 dispersed
Cmo11g00827 Cmo-Chr11:4154334 Cmo11g00830 Cmo-Chr11:4187706 4.96E-13 proximal
Cmo10g01015 Cmo-Chr10:5296282 Cmo11g00827 Cmo-Chr11:4154334 1.02E-11 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00827 K11000 - csv:101216435 287.73