Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo11g00827 | ATGACACAAGTTGAGGAGTTATGGGAACGCTTAGTTCGAGCTGCCTTAAGAAGAGATAGAATTGGTTTTGATGCATATGGACGCCCTGAAAGTGGCATTGCTGGAAATGTACCATCTTCACTTGCAAACAATAGGGATATTGATGAAATCTTGAGAGCTGCAGATGAAATCCAAGATGAAGATCCCAATGTTGCGAGAATATTATGTGAGCATGCATATTCGCTTGCGCAAAACCTGGATCCGAATAGTGAAGGGAGAGGTGTTTTGCAATTCAAAACTGGTTTGATGTCTGTAATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAATAATAGATAGAAGGCAGGACGTTACTCGGTTACAAGAGTTCTACAGACTATACCGAGAGAAAAATAATGTAGATAAGCTTCGGGAAGATGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGGTAACCTTGGAGAGTAA | 468 | 41.24 | MTQVEELWERLVRAALRRDRIGFDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDEDPNVARILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREGGIIDRRQDVTRLQEFYRLYREKNNVDKLREDEMKLRESGAFSGNLGE | 155 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 4154334 | 4159273 | - | CmoCh11G008270.1 | Cmo11g00827 | 391446 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo11g00827 | 155 | Gene3D | - | 33 | 147 | IPR023175 | - | |
| Cmo11g00827 | 155 | PANTHER | CALLOSE SYNTHASE 9 | 1 | 151 | - | - | |
| Cmo11g00827 | 155 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 1 | 151 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo11g00827 | Cmo-Chr11:4154334 | Cmo11g00052 | Cmo-Chr11:215531 | 5.21E-56 | dispersed | |
| Cmo11g00827 | Cmo-Chr11:4154334 | Cmo11g00830 | Cmo-Chr11:4187706 | 4.96E-13 | proximal | |
| Cmo10g01015 | Cmo-Chr10:5296282 | Cmo11g00827 | Cmo-Chr11:4154334 | 1.02E-11 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo11g00827 | K11000 | - | csv:101216435 | 287.73 |