Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00828 ATGAATAGGCTAATTTTAAAATTAGCTCACTCAGCCAAGTACAAAGTGCAAACATGTTCTGCTGTTTATATCAAGGTTGTTGAAAAAGATAAGTTTGATGCTGCCCGATTTTCTCCCTTCTGGAATGAAATCGTAGCAAGTTTAAGGGAAGAAGATTATATTACAAACTTGGAATCGGAGTTGCTTCAAATGCCTAAAAACAAGGGTAATCTTCCCCTGGTTCAGTGGCCCCTTTTTCTTCTTGCCAGCAAGATATTTCTAGCAAAGGATATTGCTGTTGAGAGACGGGATTCACAAGACGAGTTGTGGGAGCGTATTTCAAGAGATGACTATATGAAATATGCAGTACAGGAATGTTACCACGCAATTAAGCTCATCTTAACAGAATTACTGGTTGGGGAAGGAAGGACGGTTGAAAGGGTATTTGAAGACATTCAAGCTAGTATAGCAAACAATTCCATTCAAAATGACTTCCAGCTAAATAAGCTACCACTTGTGATTACAAGAGTAACTGCTCTGACGGGTATTCTGAAAGAGCCAGAAACTCCGGAGCTCGAAATAGGTGCTGTTAAGGCACTTCAAGATTTGTATGATGTTGTGCACCATGATATCCTTTTTGGCGACAAGAGGGGGCATTATGAAACATGGAACATATTGGTAAAAGCTAGAAATGAAGGTCGCCTGTTTACAAGGTTAAATTGGCCCAAAGATCCAGAATTGAAGTCTCAAGTGAAAAGATTACATTCCCTGTTAACCATAAAAGATTCAGCTTCAAATATTCCAGTTAATCTTGAGGCCAGACGTAGACTGCAATTCTTTACAAATTCACTTTTCATGGCTATGCCAAAGCCAAAACCTGTTCGTCAGATGCTTTCTTTCAGTGTATTTACTCCATATTATTCTGAGACGGTGCTCTATAATGAATGGAAGAACTTTCTTGCTCGAATTGACCGAGATGAGAATGAAGTTGACCCAGAATCGTTTGATAATCCTAATGACAACCTTGCACTACGATTTTGGGCCTCTTATCGAGGACAGACATTAGCAAGAACTGGTAAAGTTTTAAGCTGTCTTGAGATATACATGTATAGATTAAGCTGCGGGAGATTTTTTGCAGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTGCAGACTTATTTAGAAAGAGGAACTTACGGAGCTGCCATTCCTTGTACTGATGCTACTGATACTCGGGGTTTCGATTTATCTCCTGAAGCACGTGCACAGGCAGATCTTAAATTTACGTATGTTGTGACCTGTCAGATATATGGAAGACAAAGAGAACAACAAAAACCTGAGGCTTCTGATATTGCATTGCTTATGCAAAGAAATGAAGCTCTTCGTGTTGCCTACATTGAAGATATTGAAACCCAAAAGGATGGTAAGGTGCAGAAAGAATTTTACTCAAAGCTGGTGAAGGCTGATATCAATGGAAAAGATAAGGAGATTTATTCCATCAAATTGCCTGGAGATCCAAAGTTGGGTGAAGGAAAGCCTGAGAATCAAAATCATGCTGTTATTTTTACTCGTGGAAATGCTGTTCAGACGATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAAATGAGAAATCTTCTTGAGGAATTTGCTAAAGATCATGGTATTCGTCCTCCTACCATACTGGGTGTCAGGGAACATATATTTACGGGCAGTGTTTCATCTCTGGCTTCATTCATGTCAAATCAAGAAGCTATTTTTGTGACTCTTGGTCAGCGTGTTCTGGCAAATCCCTTGAAAGTTCGTATGCATTATGGCCATCCCGATGTTTTTGATAGGGTTTTCCATCTAACGCGAGGTGGCTTCAGCAAGGCCTCCCGTGCTATCAACATTAGTGAAGATATCTATGCAGGATTTAATACAACTTTGCGACAAGGAAACGTTACCCATCATGAGTATATTCAGGTCGGTAAAGGACGAGATGTTGGTCTTAATCAGATTGCTCTTTTCGAAGGGAAGATTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGTGATGTATACAGACTTGGCCAACTGTTTGATTTTTTCCGGATGATGTCATTCTATTTTACGACTGTTGGCTACTACTTTTGTACTATGTTAACGGTGTTGACTGTGTACATTTTTCTCTATGGGAAAGCATATTTGGTAAAAAATAATATACTGAAAAGATGTGCGGCTGTGTTTCAGGCACTGTCTAGCGAGGGCATGGAAGATAGAGCCCATATTACAGATACTGCTGCATTGTCAGCTGCTTTGAATAAACAGTTCCTTATCCAAAATGGTATCTTCACTGCAATGCCGATGATCTTGGGATTTATTTTGGAGCAAGGTTTCTTCAGGGCTATTGTCAGCTTTATAACCATGCAGCTTCAGCTTTGTTCTGTCTACTTCACATTCTCTCTTGGGACAAATACTCACTATTTTGGCCGAACAATTCTTCATGGTGGTGCAAAGTATCATGCAACTGGAAGGGGCTTTGTGGTTCGCCATATCAAATTCTCAGAAAATTACAGAATGTACTCTCGCAGCCATTTTGTTAAAGGATTGGAAGTTGTGCTCCTGTTGGTTGTATACATGGCCTACGGATATAGTTCAGGTGGTTCGATAGCATACATCCTTGTCACTCTTAGCAATTGGTTCATGGCAATATCGTGGCTTTTTGCTCCCTATTTGTTCAATCCATCGGGGTTTGAATGGCAGAAGACCGTGGAGGACTTCAGAGAATGGACCAATTGGCTTTTTTACCGTGGTGGAATTGGTGTTAAGGGTGAAGAAAGCTGGGAAGCATGGTGGGACTCAGAACTGGCACATATAAAAACTCTTGAAGGGCGGATAGCAGAGACTATTCTGAATCTAAGATTTTTTATTTTTCAATATGGCATTGTTTACAAGCTCAATGTGCAAGGATCAAACACATCATTGTCGGTTTTTACCTTGAGCCAGACGATGACCGTCAATTTTCAGCTTTTGTTGCGTTTTATCCAAGGTCTATCTTTCCTTTTGACGCTGGCTGGCATGGCCGTTGCGGTTGCTATTACAGACTTGTCACTGCCTGATATATTCGCTTGCATCTTGGCATTTGTACCTACAGGATGGGGCATTCTTTCTATTGCAGCAGCTTGGAAACCTGTGATAAAGAAACTGGGATTCTGGAAATCCATCTGCTCAATTGCTCGTCTGTATGATGCCGGGATGGGGATGCTCGTCTTTATCCCCATTGCATTTCTTTCGTGGTTTCCTTTTGTATCGACATTCCAAACTCGTCTTATGTTCAACCAGGCTTTCAGTCGAGGGCTCAAGGTCTCACTAATTCTTGCTGGAAACAATCCCAACACTGCCCTATGA 3381 40.73 MNRLILKLAHSAKYKVQTCSAVYIKVVEKDKFDAARFSPFWNEIVASLREEDYITNLESELLQMPKNKGNLPLVQWPLFLLASKIFLAKDIAVERRDSQDELWERISRDDYMKYAVQECYHAIKLILTELLVGEGRTVERVFEDIQASIANNSIQNDFQLNKLPLVITRVTALTGILKEPETPELEIGAVKALQDLYDVVHHDILFGDKRGHYETWNILVKARNEGRLFTRLNWPKDPELKSQVKRLHSLLTIKDSASNIPVNLEARRRLQFFTNSLFMAMPKPKPVRQMLSFSVFTPYYSETVLYNEWKNFLARIDRDENEVDPESFDNPNDNLALRFWASYRGQTLARTGKVLSCLEIYMYRLSCGRFFAVRGMMYYRKALMLQTYLERGTYGAAIPCTDATDTRGFDLSPEARAQADLKFTYVVTCQIYGRQREQQKPEASDIALLMQRNEALRVAYIEDIETQKDGKVQKEFYSKLVKADINGKDKEIYSIKLPGDPKLGEGKPENQNHAVIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFAKDHGIRPPTILGVREHIFTGSVSSLASFMSNQEAIFVTLGQRVLANPLKVRMHYGHPDVFDRVFHLTRGGFSKASRAINISEDIYAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIALFEGKIAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLVKNNILKRCAAVFQALSSEGMEDRAHITDTAALSAALNKQFLIQNGIFTAMPMILGFILEQGFFRAIVSFITMQLQLCSVYFTFSLGTNTHYFGRTILHGGAKYHATGRGFVVRHIKFSENYRMYSRSHFVKGLEVVLLLVVYMAYGYSSGGSIAYILVTLSNWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFYRGGIGVKGEESWEAWWDSELAHIKTLEGRIAETILNLRFFIFQYGIVYKLNVQGSNTSLSVFTLSQTMTVNFQLLLRFIQGLSFLLTLAGMAVAVAITDLSLPDIFACILAFVPTGWGILSIAAAWKPVIKKLGFWKSICSIARLYDAGMGMLVFIPIAFLSWFPFVSTFQTRLMFNQAFSRGLKVSLILAGNNPNTAL 1126
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4164674 4179182 - CmoCh11G008280.1 Cmo11g00828 391447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00828 1126 PANTHER BNAC03G35120D PROTEIN 23 307 - -
Cmo11g00828 1126 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 307 1125 - -
Cmo11g00828 1126 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 23 307 - -
Cmo11g00828 1126 PANTHER BNAC03G35120D PROTEIN 307 1125 - -
Cmo11g00828 1126 Pfam 1,3-beta-glucan synthase component 330 953 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cmo11g00828 1126 Pfam 1,3-beta-glucan synthase component 260 308 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00828 Cmo-Chr11:4164674 Cmo02g00631 Cmo-Chr2:3918920 0 dispersed
Cmo11g00826 Cmo-Chr11:4114229 Cmo11g00828 Cmo-Chr11:4164674 0 proximal
Cmo11g00828 Cmo-Chr11:4164674 Cmo11g00830 Cmo-Chr11:4187706 4.75E-26 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00828 K11000 - csv:101216435 1932.15