Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00844 | ATGGAGAATCTTATGATGGTCGATGATGCGTTGGGAGATTGTTCGGATATGGAAGTTGATGATATAAGGTGTGACAATATTGCAGAGAAAGATGTTAGTGATGAAGAAATCGAACCCGAGGATTTGGAGAAGCGTATGTGGAAGGATAGGATCAAGCTTAAAAGGATTAAGGAACGACAGAAGATTGCGGCACAACAGGCTGCGGAGAAGCAGAAGCCAAAGCATACGTCTGACCAGGCTCGGAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAGTACATGTTAAAACTTATGGAAGTATGTAAAGCTCGGGGATTTGTATATGGCATTATTCCAGAAAAGGGGAAACCGGTTAGCGGTGCTTCTGATAACATTCGAGCGTGGTGGAAAGAAAAGGTTAAATTTGATAAGAACGGGCCGGCTGCCATAGCCAAGTATGAAGCAGAATGTCTTGCCAAGGGAGAGACAGATGGAAATGGAAATAGGAATTCGCAGAGCGTTCTTCAAGATCTTCAGGATGCGACACTCGGGTCTCTTTTGTCTTCGTTGATGCAACATTGTGATCCCCCTCAACGGAAGTACCCTTTAGAAAAAGGGGTCCCTCCACCTTGGTGGCCCTCTGGAAATGAAGCTTGGTGGGAAAAACTCGGGCTATCTCATGGCGTTAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAGGTCGGGGTCTTAACGGCTGTGATAAAGCATATGTCTCCTGATATTGCAAAGATAAGGAGGCATGTACGTCAGTCGAAGTGCTTACAAGACAAGATGACAGCAAAGGAGAGTGCAATATGGTTGGGAGTTTTAAGCCGAGAGGAATCTCTAATTCGACAACCGAGCAGCGATAATGGGGCATCTGAAATTACAGAGACACCGGTTGGTGGTCGTGGTGGAAAGCAAGCTGCCATTAGCAGTGACAGTGACTATGATGTTGATCTTGCAGATGATGGTGGGTCAGTTTCTCGTAAAGACGACAGGAGGAATCGATTGGTGGATGCCGAGCCATCCAGTAATCTACGCAACAATGCTCCTCAACCTGCTCAAGTAAAGGAGCAAGGTGAACAGCATCGGAGAAAAAGACATCGTGGTGGCAGGTCAAAACCTGCCGATGAAACACCGAACGAGGAAGAATTAAACGTCGAGCCAAGAAATACTCATCTAGATATAAATCATTCTGATGTACCATTAGGTAGACATGAAATTCCAGGAAACCTACCAGAAAAGGATACTGTCACAGCTTTGAGGCCACTGGAGAAAGATATGGATGTCCGATCAGACGTACCAGCTCCCCAGTTCGACATGTTCTCCACGAGTGCCACGGATAATATCAACATAATTTCCACACAGAGCATGTATGTTGATGGAAGGCCTTTGTTGTATCCCGTAATGCAGAATGTCGACATGCAACAGGAAAGCGCTTACGATATTTATAATCCACCAGTGGAATATAATTCCAACTATGATGTACAGCATCCTCAATTTGTTAACGAGCCTCAATTGAGATCGGAGGAAGGAGCACACGTGCCAACACAAAATAGAAACGACGAGACGATTGGAGGAGATTTCAACTATATAAAAGAAACGTTCGACAACAAACAAGATAGGCCTGTTGACTCACAGTTTGGATCACCAATCAATAGTCTCTCATTAGATTATGGAGCATTTAACAGTCCGTTCCATCTTGGAATCGACGTTTCAAGCTCGTTCGATGACTTCTTGGTTGACGACGATTTGATCCAATACTTCGGAGCTTAG | 1797 | 44.69 | MENLMMVDDALGDCSDMEVDDIRCDNIAEKDVSDEEIEPEDLEKRMWKDRIKLKRIKERQKIAAQQAAEKQKPKHTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAKGETDGNGNRNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEAWWEKLGLSHGVSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASEITETPVGGRGGKQAAISSDSDYDVDLADDGGSVSRKDDRRNRLVDAEPSSNLRNNAPQPAQVKEQGEQHRRKRHRGGRSKPADETPNEEELNVEPRNTHLDINHSDVPLGRHEIPGNLPEKDTVTALRPLEKDMDVRSDVPAPQFDMFSTSATDNINIISTQSMYVDGRPLLYPVMQNVDMQQESAYDIYNPPVEYNSNYDVQHPQFVNEPQLRSEEGAHVPTQNRNDETIGGDFNYIKETFDNKQDRPVDSQFGSPINSLSLDYGAFNSPFHLGIDVSSSFDDFLVDDDLIQYFGA | 598 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4288727 | 4290523 | + | CmoCh11G008440.1 | Cmo11g00844 | 391463 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00844 | 598 | Gene3D | - | 160 | 298 | IPR023278 | GO:0003700|GO:0005634 | |
Cmo11g00844 | 598 | Gene3D | - | 74 | 152 | IPR023278 | GO:0003700|GO:0005634 | |
Cmo11g00844 | 598 | MobiDBLite | consensus disorder prediction | 379 | 393 | - | - | |
Cmo11g00844 | 598 | SUPERFAMILY | DNA-binding domain of EIN3-like | 168 | 290 | IPR023278 | GO:0003700|GO:0005634 | |
Cmo11g00844 | 598 | MobiDBLite | consensus disorder prediction | 71 | 85 | - | - | |
Cmo11g00844 | 598 | PANTHER | ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN | 1 | 597 | IPR006957 | GO:0005634 | |
Cmo11g00844 | 598 | MobiDBLite | consensus disorder prediction | 62 | 85 | - | - | |
Cmo11g00844 | 598 | PANTHER | ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN | 1 | 597 | - | - | |
Cmo11g00844 | 598 | Pfam | Ethylene insensitive 3 | 40 | 287 | IPR006957 | GO:0005634 | |
Cmo11g00844 | 598 | MobiDBLite | consensus disorder prediction | 348 | 363 | - | - | |
Cmo11g00844 | 598 | MobiDBLite | consensus disorder prediction | 289 | 393 | - | - | |
Cmo11g00844 | 598 | MobiDBLite | consensus disorder prediction | 329 | 347 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00844 | Cmo-Chr11:4288727 | Cmo16g00750 | Cmo-Chr16:3765531 | 8.02E-97 | dispersed | |
Cmo11g00844 | Cmo-Chr11:4288727 | Cmo15g00557 | Cmo-Chr15:2663581 | 3.62E-131 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10581 | PF04873 | EIN3 | 1.10E-126 | No_clan | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00844 | K14514 | - | csv:101210347 | 995.727 |