Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00916 ATGGCCACTCAGGCTCTTGTTTCATCCTCGTCTCTAACCTCTTCAGTGGGCGCTGCCAGACAGCGATTAGGACCAAAGCCCTCCCTTGGTTCCTCCAGAAAGGCCGCTTCTTTCGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCTAACAGACAATTATGTCTTCCGGGCGATTACGGGTTCGATCCATTGGGACTATCAGACCCCGAGGGCACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTCGCGATGTTAGGAGCCGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGTTTTGCTGAACACAGAAGATTTCAAGATTGGTACAACCCAGGATCCATGGGAAAGCAATACTTCTTAGGGTTAGAGAAGTTCTTGGGTGGGTCAGGTGACCCAGCTTACCCAGGTGGCCCCTTGTTCAACCCTTTAGGGTTTGGAAAAGATGAGAAATCAATGAAGGAATTGAAGCTGAAGGAGATCAAGAATGGGAGGCTTGCAATGTTGGCTATCTTGGGTTACTTCATACAAGGCCTTGTCACTGGTGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTGTCAACAACAACGTTTTGACAAGCCTTAAGTTCCACTAG 786 50.13 MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLCLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4728050 4730261 - CmoCh11G009160.1 Cmo11g00916 391535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00916 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 260 IPR001344 GO:0009765|GO:0016020
Cmo11g00916 261 Pfam Chlorophyll A-B binding protein 58 230 IPR022796 -
Cmo11g00916 261 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 260 - -
Cmo11g00916 261 SUPERFAMILY Chlorophyll a-b binding protein 38 257 - -
Cmo11g00916 261 Gene3D Chlorophyll a/b binding protein domain 40 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00916 Cmo-Chr11:4728050 Cmo10g00213 Cmo-Chr10:948889 9.22E-47 dispersed
Cmo10g00908 Cmo-Chr10:4497381 Cmo11g00916 Cmo-Chr11:4728050 9.05E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00916 K08909 - csv:101202993 491.115