Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00931 ATGGGTGTTTCAGGAAAATGGTTCAAAGCATTAGTCGGTTCGAAGAAATCGGAAAAATCTCAGTCATCAGAACATGACGAAAATGCGAGGACAATTACGAACAAGTTTTGGCATCGGAGAAAGCATTCTGTTGATATCGATGCTGATAAACTTCAGCAGGAGTTCAATTCAAACTTTACCTCATTTGTTGAAGAGTCCAATGCCCTTTCGGATCCAGAAGCCGCTTCTATTCCTTCTGGTTCACTTCAAACATGTGATGCATTGCGTAGTCGACAGAATGATATAGAAGAACAGGCGGCTATACGTATCCAAACAATGTTTCGATCGTTTCTGGCTAGAAGAGCTCTCCGAGCTCTGAAGGGATTGGTTAGACTTCAAGCTCTTGTTAGGGGTCATGCTGTCAGAAAACAAGCTGCAATAACTCTTCGCTGTATGCAAGCTTTAGTGAGAGTCCAGGCTCGTGTTCGAGCAAGGCGTGTACGTATTGCATTGGAAAGTGAAACTGCACAGCAGAAAATTCAACAACAACTTGAAAACCAAGCCCGTGTTCGTGAAATTGAAGAAGGTTGGTGCGACAGTGTTGGATCGGTTGAAGAGATTCAAGTAAAATTATTAAAAAGGCAGGAGGCTGCAGCTAAGCGTGAGAGAGCTATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCGAGACAGCGGGCTGCCCTCTCCGAGTTCGAACCTGATAAAAGCAGCTGGGGTTGGAACTGGTTGGAAAGATGGATGGCTGTTCGTCCATGGGAAAACCGCTTTCTCGATATTAATCTCAGAGACGGAGTGATGATTCGCGAGAACGGATCAGCTGAGGGAAAAAGTAACACGAAATCCTATTCAAAAACGACCAGCAAGAAACCAAACTTAGTGACTGATCAATCAAACCTCTCAAGCCAAAAAACCGCTGCCTCACACTCTGATGGATATGGTTCATCATCTCCCACTCAATCACCTGGCATTGTAGAGGTATCCAGTGCACAGATTCAAAAGCCCAAGTATAAAGTTCGACCTGAGAGGCCATTCGACGAAGTCAAGCCTAAAGTAGATACCGGTTTGAGATCCCATAGCAATCCGAAAGAGAGATCCACGCCATTGGTAAAAAACGCTAAGAAGCGATTATCCATGCCTAACAATGTTGCAGACCCCGGTAGTCAAAATCAAGGGGCGAGAAATTCCAATAGAACTGCTGCTGGCAAAGTGACCGACAAACCCAAGCCGATCGCAAGAGGCGACTCGAAATCTGCAAATCCCGGATCACAAAACTGA 1299 45.42 MGVSGKWFKALVGSKKSEKSQSSEHDENARTITNKFWHRRKHSVDIDADKLQQEFNSNFTSFVEESNALSDPEAASIPSGSLQTCDALRSRQNDIEEQAAIRIQTMFRSFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESETAQQKIQQQLENQARVREIEEGWCDSVGSVEEIQVKLLKRQEAAAKRERAMAYALAHQWQAGSRQRAALSEFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMIRENGSAEGKSNTKSYSKTTSKKPNLVTDQSNLSSQKTAASHSDGYGSSSPTQSPGIVEVSSAQIQKPKYKVRPERPFDEVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSMPNNVADPGSQNQGARNSNRTAAGKVTDKPKPIARGDSKSANPGSQN 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4836470 4840092 - CmoCh11G009310.1 Cmo11g00931 391550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00931 432 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Cmo11g00931 432 PANTHER IQ-DOMAIN 5-RELATED 2 403 - -
Cmo11g00931 432 MobiDBLite consensus disorder prediction 280 335 - -
Cmo11g00931 432 MobiDBLite consensus disorder prediction 389 409 - -
Cmo11g00931 432 Gene3D - 93 141 - -
Cmo11g00931 432 MobiDBLite consensus disorder prediction 279 432 - -
Cmo11g00931 432 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Cmo11g00931 432 MobiDBLite consensus disorder prediction 343 367 - -
Cmo11g00931 432 PANTHER IQ-DOMAIN 5-RELATED 2 403 - -
Cmo11g00931 432 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00895 Cmo11g00931 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00931 Cmo-Chr11:4836470 Cmo15g00445 Cmo-Chr15:2025442 1.15E-50 dispersed
Cmo16g00447 Cmo-Chr16:2143563 Cmo11g00931 Cmo-Chr11:4836470 1.56E-32 dispersed
Cmo10g00895 Cmo-Chr10:4380090 Cmo11g00931 Cmo-Chr11:4836470 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00931 - - cmax:111495471 756.903