Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00953 | ATGGGGCCTTGCTTGTCTGTTGGATGTAAGAGGGCCATGGCTGGTTCCTCTGTATCTTCTGTGCTGGAAGCAAGAAAACTGAAAGACTCAGAAAATGGGCTGGAGTCCAAGGATTCTATGTTTGAGCAGCAGAGTGAAGAAGCAACAGTTCACCGAATTCCGGGTCGGATGTTCTTGAATGGATCCAGTGAAGTTGCCTCACTTTATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGCACTTTGGCTCAAGAACAGATACATTCTTCTGTGGAGTTTTTGATGGCCATGGTCCTAACGGTCATCTGGTTGCGAAAAGAGTGAGGGATTCTCTGCCCCTGAAACTGACTGCACATTGGGAAGCTAATGCAAGCAATGAGGATATTTCAAAAGAGTTTGGTCATAAAACAGGTCTCAACAATGAAAATTCTGGGTTAGAAACTGATTGGAAGGAAGCTAGTTCTCCCCTTAAGCACCATGAAATTTCTGAAAATATGAAGGAATCATTTTTGAAGGCTTTTAAGAGAATGGATGTGGAACTCAAAATGCAGCCAAGTATTGACTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGATCGAGATCTTGTTATTGGAAATGTCGGGGACTCTCGAGCTGTGTTGGGTACCAGAGACAAGGATAATTGTCTCCAAGCAGTTCAGTTGACCATAGATCTCAAGCCAGATATTCCAGCGGAAGCAGAGAGAATTCTCCAGTGCAAGGGTCGGGTATTTGCCCATGAGGATGAACCAGAAGTTGCTAGGGTATGGCTTCCAAACAATGATTCCCCTGGGCTGGCAATGGCACGATCTTTCGGCGACTTTTGCCTCAAGGACTTCGGTCTAATTTCTGTTCCTGAAATTTCGTATCGGTTTCTGACGGACGAAGACGAGTTTATAGTTTTAGCTACCGACGGAATTTGGGATGTTCTCTCAAACAAAGAGGTAGTCGACATTGTGGCATCGACCCCAGCTCGTTCTGCAGCTCAATCATTGGTTGAGTCTGCAACTAAAGCATGGAGGCGCAAGTTTCCTTTTTCCAACATTGACGACTGTGCTGTTGTGTGCCTCTTCCTCGACTCGAACTTGATGGTATCAGATATGAATGTTAAATCCCAGGAGGATAGTTCAGCAGTTCAAGCTGAGACAGCCATGGTGGATGATGATGTCTCAGGCGCAGCTGGTCTACGGTGTTCGGAAATCGTGCAAACAGTAGGAGTTTCTACATGA | 1278 | 45.62 | MGPCLSVGCKRAMAGSSVSSVLEARKLKDSENGLESKDSMFEQQSEEATVHRIPGRMFLNGSSEVASLYTQQGKKGMNQDAMIVWEHFGSRTDTFFCGVFDGHGPNGHLVAKRVRDSLPLKLTAHWEANASNEDISKEFGHKTGLNNENSGLETDWKEASSPLKHHEISENMKESFLKAFKRMDVELKMQPSIDCFCSGTTAVALVKQDRDLVIGNVGDSRAVLGTRDKDNCLQAVQLTIDLKPDIPAEAERILQCKGRVFAHEDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLTDEDEFIVLATDGIWDVLSNKEVVDIVASTPARSAAQSLVESATKAWRRKFPFSNIDDCAVVCLFLDSNLMVSDMNVKSQEDSSAVQAETAMVDDDVSGAAGLRCSEIVQTVGVST | 425 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5012030 | 5014543 | + | CmoCh11G009530.1 | Cmo11g00953 | 391572 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00953 | 425 | PANTHER | PROTEIN PHOSPHATASE 2C 33-RELATED | 1 | 388 | - | - | |
Cmo11g00953 | 425 | CDD | PP2Cc | 65 | 375 | IPR001932 | - | |
Cmo11g00953 | 425 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 388 | - | - | |
Cmo11g00953 | 425 | Gene3D | - | 60 | 377 | IPR036457 | - | |
Cmo11g00953 | 425 | SMART | PP2C_4 | 57 | 373 | IPR001932 | - | |
Cmo11g00953 | 425 | MobiDBLite | consensus disorder prediction | 138 | 164 | - | - | |
Cmo11g00953 | 425 | MobiDBLite | consensus disorder prediction | 28 | 45 | - | - | |
Cmo11g00953 | 425 | MobiDBLite | consensus disorder prediction | 142 | 156 | - | - | |
Cmo11g00953 | 425 | SUPERFAMILY | PP2C-like | 63 | 376 | IPR036457 | - | |
Cmo11g00953 | 425 | Pfam | Protein phosphatase 2C | 120 | 350 | IPR001932 | - | |
Cmo11g00953 | 425 | MobiDBLite | consensus disorder prediction | 28 | 47 | - | - | |
Cmo11g00953 | 425 | ProSiteProfiles | PPM-type phosphatase domain profile. | 65 | 375 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00519 | Cmo-Chr1:2498314 | Cmo11g00953 | Cmo-Chr11:5012030 | 1.18E-168 | dispersed | |
Cmo08g00081 | Cmo-Chr8:420886 | Cmo11g00953 | Cmo-Chr11:5012030 | 3.01E-161 | dispersed | |
Cmo11g00953 | Cmo-Chr11:5012030 | Cmo17g00575 | Cmo-Chr17:5906993 | 8.39E-156 | dispersed | |
Cmo11g00953 | Cmo-Chr11:5012030 | Cmo05g00859 | Cmo-Chr5:5570993 | 6.28E-174 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00953 | - | - | cmax:111498595 | 835.869 |