Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00963 ATGAGGCTTGAAGTGGAAGAAAACGATGTCGACGACGTTCTTCTTCCTCCTTCCAACTTCTCCATGGTTGAGGATGGTATTTTCCGATCCGGTTTCCCTCGGCCGGCTAATTTCCCCTTCCTCAAGAACCTCAACCTCCGCTCCATCATCTATCTGTGTCCAGAACCCTATCCAGAGGAGAATTTGGAGTTTCTTAGAGCCAATAACATCAAGCTTTTTCAATTCAAAATCGAAGGAAAAAAGGAGCCTTTCGTTTCAATGCCCAAGGATGCTATTCTGGATGCCCTAAAAATCCTAATTGATGTTAGGAATCATCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTGGTCGGTTGCCTGAGAAAGTTTCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAGTCAAGGACGACTGACCTACAATTCATCGAGACGTTCGACATCAGTTTGCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGTTACAGCCAAAGCAAGAGGAGGCTGGTCTACCGAGAAGAAAATTTGCAGAAACCCCAACCAACATCAGTTTAG 603 45.94 MRLEVEENDVDDVLLPPSNFSMVEDGIFRSGFPRPANFPFLKNLNLRSIIYLCPEPYPEENLEFLRANNIKLFQFKIEGKKEPFVSMPKDAILDALKILIDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRFAGMKSRTTDLQFIETFDISLLRQCVYSIIYQYQGYSQSKRRLVYREENLQKPQPTSV 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5063323 5065540 - CmoCh11G009630.1 Cmo11g00963 391582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00963 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 9 183 - -
Cmo11g00963 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 160 IPR029021 -
Cmo11g00963 200 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791
Cmo11g00963 200 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791
Cmo11g00963 200 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791
Cmo11g00963 200 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Cmo11g00963 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 170 IPR020422 GO:0006470|GO:0008138
Cmo11g00963 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 109 119 IPR016130 GO:0016311|GO:0016791
Cmo11g00963 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 9 183 - -
Cmo11g00963 200 CDD PFA-DSP_Siw14 14 160 - -
Cmo11g00963 200 Pfam Tyrosine phosphatase family 14 164 IPR004861 -
Cmo11g00963 200 Gene3D Protein tyrosine phosphatase superfamily 13 163 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00063 Cmo-Chr2:325814 Cmo11g00963 Cmo-Chr11:5063323 1.52E-41 dispersed
Cmo11g00963 Cmo-Chr11:5063323 Cmo20g00254 Cmo-Chr20:1227643 1.82E-77 dispersed
Cmo10g00860 Cmo-Chr10:4080061 Cmo11g00963 Cmo-Chr11:5063323 9.55E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00963 K18045 - csv:101211082 352.058