Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01041 ATGGTAAAGTGCGCTAATAAGTGGGTTATAAAAGCTCTGAATTGGGGAAGTGCGGATCGAGAAAGCATGTGGAATTGGATATGGGCGGTGGGTTTGGGATTGTTGGGTGTATGGGGATGGAAGATCTTGAATTGGATGTGGTTGACGCCGAAGAGGCTGGAGAAGTGCTTGCGACACCAAGGTCTCGCCGGCAACTCTTATCGCCTTCTGTTTGGGGATTCCAAGGACACTGCCGCTGCCGTCCGCCAAGCTAAGACGCAGCCCATCAGCTTCTCCCATCGTATTGCTGCGCGCGCCACCCCTTCCTCTCATATCACTATTCACCGATACGGCAAGGATTCTTTCACATGGATTGGCCCAACTCCAAGAGTCTATATAACACACCCTGAACAAGTGAAGGTGGTTTTCTCTCAAATCAATGATATTCGTAAGGCAACTTTGTTTCCGTTTAGAAGAAGAATGGGCGGTGGAGTCGTGTCTCTTGAAGGAGCTAAATGGGCTAAGCATAGAAAGATCATCAACCCTGCGTTTCATATGGAAAAGCTTAAGGATATGTTTCCAGCATTCTCCCAGAGTTGTAGCGAGATGATTAACAAATGGGAAATGATGATCACTAAAGAAGGGTGTTGTGAATTAGATGTATGGCCTGATTTACAAAATATGGCTGCAGATGTCATTTCTCGAACCGCATTTGGTAGTAGTTATGAGGAAGGTAAGAAGATCTTCCAGCTCTTGAAACAGTGGGCTTCCCTCTTGATGGCATATGTCATGAAAGGAGTTTACTTCATTCCCGGTTTGAGGTTTCTTCCAACCAAGTTGAACAAGAGGATGGATGAGATTAATGGCAATATACGAGACATGATTTGGGGTATTATAAACAAAAGACAAAATGCTATGAAGAAAGGTGAAGCTTCCAATGATGATCTGTTGGGCATCCTCTTAGAATCAAATTCACGTGAGATTCAAGAACACAAAAACAAGAAAGATGTTGGAATGAGCATGGAAGAAGTAATTGCTGAATGCAGACTTTTCTATTTTGCTGGCCAAGAAACCACAGCGGCATTGCTTGCTTGGACGATGGTTCTACTTGGTCGATACTCCGAGTGGCAAGATCGAGCAAGAGCGGAAGTCCTTGAGATCTTTGGTGATAATAAAAAATTCGATTTTGATGGTCTAAGTCGTCTTAAAATTGTTACTATGATACTAAATGAGGTTCTTAGACTATATCCTCCCGTTGGTCTTCTATCTCGAGAGATTCACAAGGAAACTAAGTTAGGGAATCTGACATTACCAGTTGGAGTATCAATAGGCATTCCAATTGTATGCATCCATCAAGATCCTACACTATGGGGTGAAGATGCGAGTGAGTTCAAGCCAGAGCGATTTGTCGAGGGGATTTCCAAAGCAACAAAGAATCAAGTATGCTTCATTCCTTTTGGATGGGGTCCTCGAATCTGTCTCGGTCAAAACTTTGCAATGATTGAAGCAAAAATAGCATTATCGATGATTTTGCAGCGATTCTCGTTTGAACTTTCTCCAAGTTATACTCATGCTCCTATCACCAACGTCACTATTCAGCCACAACATGGGGCTCATCTCATCCTCCGTATGTTGTAA 1617 43.29 MVKCANKWVIKALNWGSADRESMWNWIWAVGLGLLGVWGWKILNWMWLTPKRLEKCLRHQGLAGNSYRLLFGDSKDTAAAVRQAKTQPISFSHRIAARATPSSHITIHRYGKDSFTWIGPTPRVYITHPEQVKVVFSQINDIRKATLFPFRRRMGGGVVSLEGAKWAKHRKIINPAFHMEKLKDMFPAFSQSCSEMINKWEMMITKEGCCELDVWPDLQNMAADVISRTAFGSSYEEGKKIFQLLKQWASLLMAYVMKGVYFIPGLRFLPTKLNKRMDEINGNIRDMIWGIINKRQNAMKKGEASNDDLLGILLESNSREIQEHKNKKDVGMSMEEVIAECRLFYFAGQETTAALLAWTMVLLGRYSEWQDRARAEVLEIFGDNKKFDFDGLSRLKIVTMILNEVLRLYPPVGLLSREIHKETKLGNLTLPVGVSIGIPIVCIHQDPTLWGEDASEFKPERFVEGISKATKNQVCFIPFGWGPRICLGQNFAMIEAKIALSMILQRFSFELSPSYTHAPITNVTIQPQHGAHLILRML 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5744782 5748397 - CmoCh11G010410.1 Cmo11g01041 391660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01041 538 SUPERFAMILY Cytochrome P450 107 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 Pfam Cytochrome P450 109 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 Gene3D Cytochrome P450 104 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 38 535 - -
Cmo11g01041 538 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS E-class P450 group I signature 107 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS E-class P450 group I signature 356 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01041 538 PANTHER CYTOCHROME P450 FAMILY MEMBER 38 535 - -
Cmo11g01041 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00672 Cmo-Chr9:3343664 Cmo11g01041 Cmo-Chr11:5744782 2.30E-72 dispersed
Cmo10g01116 Cmo-Chr10:7666891 Cmo11g01041 Cmo-Chr11:5744782 0 dispersed
Cmo10g01122 Cmo-Chr10:8477677 Cmo11g01041 Cmo-Chr11:5744782 1.93E-41 dispersed
Cmo11g01041 Cmo-Chr11:5744782 Cmo18g01116 Cmo-Chr18:11550519 4.51E-127 dispersed
Cmo11g01041 Cmo-Chr11:5744782 Cmo01g01333 Cmo-Chr1:10578058 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01041 - - cmos:111432119 1085.86