Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01044 | ATGAGTTCTTCTCAGGATCCTCAGCTTGTTCAACAACAATCCGTTGTGGATGTTGAAGAATTCGTCTCCGTTGAAAACCCCGATTCCAAACGCTCCCAGTTTGGATCGTTGTTCAAAAACCATTACCCTCCTGGCTTTTCCCGGAAGCTTGTGGCGGAGGTGATTGCGACGTATTTGCTAGTGTTTGTAACGTGTGGGGCGGCGGCATTGAACGGGAGCGATGTGCAAAGAGTGTCGCAGCTTGGTGCCTCGGTCGCCGGTGGCCTTATTGTGACGGTGATGATTTATGCCGTCGGACACATTTCCGGCGCCCATATGAACCCGGCTGTCACCACGGCTTTTGCTGCAACACGACACTTTCCATGGAAACAGGTTCCATTGTATGCAGCAGCTCAATTGAGTGGGGCAACCTGTGCAGCCTTTACACTGCGCCTATTATTACATCCCATCAAACACTTGGGCACTACCACGCCATCAGGATCAGATTTACAAGCACTCGTCATGGAGATTGTTGTTACCTTCTCAATGATGTTTGTCACTTGTGCTGTTGCAACCGATACCAAAGCCGTGGGAGAGCTGGCAGGTTTGGCAGTTGGTTCTGCCGTGTGTATCACATCCATCTTGGCTGGGTAA | 633 | 50.71 | MSSSQDPQLVQQQSVVDVEEFVSVENPDSKRSQFGSLFKNHYPPGFSRKLVAEVIATYLLVFVTCGAAALNGSDVQRVSQLGASVAGGLIVTVMIYAVGHISGAHMNPAVTTAFAATRHFPWKQVPLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVATDTKAVGELAGLAVGSAVCITSILAG | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5789335 | 5793432 | + | CmoCh11G010440.1 | Cmo11g01044 | 391663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01044 | 210 | SUPERFAMILY | Aquaporin-like | 42 | 208 | IPR023271 | - | |
Cmo11g01044 | 210 | Pfam | Major intrinsic protein | 46 | 208 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo11g01044 | 210 | Gene3D | Glycerol uptake facilitator protein. | 7 | 210 | IPR023271 | - | |
Cmo11g01044 | 210 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo11g01044 | 210 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo11g01044 | 210 | PRINTS | Major intrinsic protein family signature | 48 | 67 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo11g01044 | 210 | PRINTS | Major intrinsic protein family signature | 168 | 186 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo11g01044 | 210 | PANTHER | MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED | 17 | 210 | - | - | |
Cmo11g01044 | 210 | PANTHER | AQUAPORIN NIP2-1 | 17 | 210 | IPR034294 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo11g01044 | Cmo14g00596 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01044 | Cmo-Chr11:5789335 | Cmo14g00597 | Cmo-Chr14:3025643 | 1.91E-96 | dispersed | |
Cmo11g01044 | Cmo-Chr11:5789335 | Cmo11g01045 | Cmo-Chr11:5812697 | 8.68E-94 | tandem | |
Cmo11g01044 | Cmo-Chr11:5789335 | Cmo14g00596 | Cmo-Chr14:3016805 | 2.49E-129 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01044 | K09874 | - | csv:101205692 | 360.918 |