Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01103 ATGGAGTCTTTGAATTCTTCCTCCTTCTTCTTCTTCCTCGTTTCTCTTCTGTTCTTCCTCGCTTTCCTATGGAGATTAAGCCGTAAACTCCCTTATCCGCCCGGCCCTACCGGCCTCCCTATCATCGGCAACATGCTCATGATGAACGAACTAACTCACCGTGGCCTCACTCGTCTCGCCGCCATCTACGGCGGCCTTTTCCACCTCCGTCTCGGCGTTCTCCATATGGTTGTCGTTTCCACGCCAGAAATGGCACGCGAGTTCCTCCAAGTTCAGGATATCGCATTCGCAAATAGACCTGCAAACGTCGCGATATCGTACCTCACGTACGACCGCGCAGATATGGCCTTCGCAAATTACGGTCCATTCTGGCGCCAAATGCGCAAGATCTGTGTCATGAAGCTTTTCAGTCGACGGCGGGCTGAATCATGGGCGTCAGTGCGCGATGAAGTCGATTCTGTACTTCAAATCGTATCGAATAAAATCGGCGAGCCTGTGAATATAGGCGAACTCGTTTTCGGTCTGACACGAAACATAACCTACAAGGCCGCGTTTGGATCGTGCTCGCACGAAGGACAAGACGAATTCGTGGAAATCCTGCAAGAATTTTCTAAACTGTTTGGCGCTTTTAACATTGCAGATTTTTTGCCATGGTTAGGCTGGATTCATGCTGGAGAATTCAATCGAAGAATGGAAAAAGCTAGAAAATCTCTTGATGTGTTCATTGATAGCATAATCGATGAACATATAGCAAAAAAATTGGGGAAAAACGATGATAATGATGAACAGGACGTTGATTCCGATATGGTGGATGAATTAATGGCGTTCCTCGTCGATGAATCGAGTAGCAATGATTTTCAACTTACTAGAGATAATATCAAAGCGATAATCATGGATGTGATGTTCGGCGGAACAGAGACGGTTGCTTCTGTGATTGAATGGTCCATGGCGGAATTAATGAGAAATCCGGAAGAGTTACAAAAGCTTCAAGAAGAACTCACACGGACTGTTGGATTAGATCGAAGACTCCATGAATCGGACCTTCAAAATCTGCCCTACCTGAAAGCCGTCGTGAAGGAGACTCTCCGCCTTCATCCGCCGATTCCGTTGCTCCTCCACGAGACCGCCGTGGACACCGCCGTTGCAGGCTACTTCATTCCGACTGGTTCAAGAGTGTGGATCAACTGCTGGGCTATTGGCCGGGATGGAACCGCTTGGGAAGATCCGGACCGGTTTCGACCAGGGAGATTTGAAAACGACGCCGCTCCGGATTTCAAAGGGAATGATTTTGAGTTCCTTCCGTTCGGGTCAGGTCGGCGGTCTTGCCCCGGAATGCAACTCGGACTTTATGCTTGTGAGATGGCGGTGGCTAATCTTCTTCATTCCTTCTCGTGGGAGTTGCCGGACGGAATGAAGGCGGAGGAGCTGGACATGAACGACTCGTTTGGTTTAACCGCTCCCAGAGCGGTTCGACTCGTTGCTGTGCCGAGTTACCGGCTTAACTCGGCCGGGTTCAATTAA 1521 49.31 MESLNSSSFFFFLVSLLFFLAFLWRLSRKLPYPPGPTGLPIIGNMLMMNELTHRGLTRLAAIYGGLFHLRLGVLHMVVVSTPEMAREFLQVQDIAFANRPANVAISYLTYDRADMAFANYGPFWRQMRKICVMKLFSRRRAESWASVRDEVDSVLQIVSNKIGEPVNIGELVFGLTRNITYKAAFGSCSHEGQDEFVEILQEFSKLFGAFNIADFLPWLGWIHAGEFNRRMEKARKSLDVFIDSIIDEHIAKKLGKNDDNDEQDVDSDMVDELMAFLVDESSSNDFQLTRDNIKAIIMDVMFGGTETVASVIEWSMAELMRNPEELQKLQEELTRTVGLDRRLHESDLQNLPYLKAVVKETLRLHPPIPLLLHETAVDTAVAGYFIPTGSRVWINCWAIGRDGTAWEDPDRFRPGRFENDAAPDFKGNDFEFLPFGSGRRSCPGMQLGLYACEMAVANLLHSFSWELPDGMKAEELDMNDSFGLTAPRAVRLVAVPSYRLNSAGFN 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6161742 6163333 + CmoCh11G011030.1 Cmo11g01103 391722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01103 506 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 6 502 - -
Cmo11g01103 506 Pfam Cytochrome P450 33 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cmo11g01103 506 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo11g01103 506 PANTHER CYTOCHROME P450 84A1-RELATED 6 502 - -
Cmo11g01103 506 Gene3D Cytochrome P450 25 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00442 Cmo-Chr7:2035379 Cmo11g01103 Cmo-Chr11:6161742 0 dispersed
Cmo09g00342 Cmo-Chr9:1476828 Cmo11g01103 Cmo-Chr11:6161742 3.95E-36 dispersed
Cmo11g01103 Cmo-Chr11:6161742 Cmo03g00816 Cmo-Chr3:6582226 7.20E-130 dispersed
Cmo11g01103 Cmo-Chr11:6161742 Cmo01g00033 Cmo-Chr1:116681 1.53E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01103 K09755 - csv:101217850 829.32