Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01111 ATGGGCGATACTCGAGGTGGCTGCTGTCCATCCATGGATCTGTTCCGCTCCGAGCCGATGCAGCTGGTGCAGCTCATCATTCCCATCGAGGCTGCGCATCGCACCATTTCCTACCTTGGTGATCTCGGTCTTCTCCAGTTCAAAGATCTCAATGTTGAGAAAAGCCCGTTCCAGCGTACTTATGCTGCACAGATGTTGAAGGCTGGATTGTCAAGCAAAAGTTCTGTGTCACAAGTTGATATCAGTATAGATGACCTTGAGGTTAAACTTGGTGAGCTTGAGGCAGAACTGGTTGAGATAAATGCTAATAGTGAGAAGCTACAGCGTTCCTACAATGAACTTGTGGAGTACAAGCTTGTTCTGCAGAAGGCTGGTGAGTTTTTCAGTTCAGCGCAAAGCAGTGCCGTAGAGCAGCAAAGAGAATTTGAATCTAGGCGAGTTGGTGGAGATTCAATAGAAGTTCCATTGTTGTTGGAACAAGAATCATCTGCGGATCAGTCAAAGCCAGTTAATTTGGGATTTCTCTCTGGTCTTGTTCCTCGGGAAAAGTCTATGGCATTTGAGAGGATACTATTTCGTGCAACCAGGGGCAATGTGTTTCTGAAGCAGGCTGCAGTTGACGATCCTGTTCCAGATCCTATTTCTGGAGAGAAGGTTGAGAAAAACGTGTTTGTTGTTTTCTACTCTGGAGAAAGAGCGAAGAATAAGATTCTAAAAATATGTGAGGCATTTGGTGCAAACCGTTACCCTTTTACCGAGGACTTGGGGAAACAAGCCCAAATGATCGCTGAGGTTTCTGGAAAACTGGCTGAGCTGAAGACTACAATAGATGTAGGGCTGCTGCACCGGGGTAATCTGTTGAAGAATATTGGAGAACATTTTGAAAATTGGAATATCATGGCGAGGAAGGAAAAGTCCATATACCATATCTTGAACATGCTTAGCCTTGATGTAACCAAAAAATGTTTGGTCGCCGAGGGATGGGGTCCTGTTTTTGCAACAAAACAGATTCAAGATGCACTCCAGCGAGCAGCAACTGACTCCAACTCCCAAGTTGGACCAATTTTCCAGGTTTTATTAACTACGGAAGCACCACCTACTTATTTTCGGACAAACAAATTCTCCACTGCCTTTCAAGAAATTGTCGATGCCTATGGGGTAGCAAAGTATCAAGAAGCCAATCCTGGTGTATACACCATTGTCACGTTTCCATTTCTGTTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATAG 1257 44.63 MGDTRGGCCPSMDLFRSEPMQLVQLIIPIEAAHRTISYLGDLGLLQFKDLNVEKSPFQRTYAAQMLKAGLSSKSSVSQVDISIDDLEVKLGELEAELVEINANSEKLQRSYNELVEYKLVLQKAGEFFSSAQSSAVEQQREFESRRVGGDSIEVPLLLEQESSADQSKPVNLGFLSGLVPREKSMAFERILFRATRGNVFLKQAAVDDPVPDPISGEKVEKNVFVVFYSGERAKNKILKICEAFGANRYPFTEDLGKQAQMIAEVSGKLAELKTTIDVGLLHRGNLLKNIGEHFENWNIMARKEKSIYHILNMLSLDVTKKCLVAEGWGPVFATKQIQDALQRAATDSNSQVGPIFQVLLTTEAPPTYFRTNKFSTAFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGI 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6223719 6237732 + CmoCh11G011110.1 Cmo11g01111 391730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01111 418 PANTHER VACUOLAR PROTON ATPASES 4 418 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo11g01111 418 Pfam V-type ATPase 116kDa subunit family 75 418 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo11g01111 418 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 418 - -
Cmo11g01111 418 Coils Coil 76 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01111 Cmo-Chr11:6223719 Cmo19g00696 Cmo-Chr19:7351871 0 dispersed
Cmo11g01111 Cmo-Chr11:6223719 Cmo12g00383 Cmo-Chr12:2370897 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01111 K02154 - csv:101211364 764.607