Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01145 ATGATGGCTGGAAGTAATCAAATCAACCTCAACGACTCTAAGATGGTGGTTCCACTTAATACCTGGGTTCTTATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGCCCTGATGGCACGTTCAATCGCCATTTGGCCGAGTTTCTTGACCGAAAAGTCCCAGCCAATGCTAACCCTGTTGATGGGACTTTCTCATTTGATGTCGTTATCGATCGAGCTACTGGTCTCCTTTGTCGAATATATCGACCCGCCATTGGAGATGAATCTCAGAGTACTTACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGCCCCTGTTATTATTTTCTTTCATGGTGGAAGCTTTGCTCATTCCTCTGCTAACAGTGCTATCTATGATACGCTATGCCGTCGATTAGTCAGCATTTGCAAGGCTGTTGTCGTCTCTGTGAACTACAGGCGTGCGCCTGAGAATCGTTATCCTTGTGCTTATGATGATGGATGGACTGCGCTCAATTGGGTAAAGTCAAAATCATGGCTTCGAAGTAAAGACTCGAAGACCTATATTTATTTGGCTGGCGATAGTTCAGGTGGAAACATCGTACACCATGTTGCATCGAGAGCAGTAAAGTCGGGGATCGAAGTATTCGGTAATATACTTCTCAATCCTATGTTTGGAGGGCAGGAAAGAACTAAATCTGAGGTTCGGTTGGATGGAAAGTATTTCGTTACCATTCGGGATAGAGACTGGTATTGGAGGGCCTTCCTTCCTGAAGGGGAAGATAGGGATCATCCAGCATGTAATCCCTTCGGCCCGAGAGGTAATAGCCTCAAAAAAATCAAGTTCCCAAAGAGCCTTGTCGTGGTGGCTGGTTTCGATCTCGTCAAAGACTGGCAATTAGCTTATGCTAAAGGGCTCGAGAAGGATGGCCAGAAGGTGAAACTTTTGTATCTTGATCAAGCAACAGTTGGCTTCTACTTGCTACCGAATACCGAGCACTTCTATACCGTCATGGACGAGATAAGTGAATTCGTGAGTTCTGACTGTTAA 1041 44.86 MMAGSNQINLNDSKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGTFSFDVVIDRATGLLCRIYRPAIGDESQSTYIVDLEKPVDSEVVAPVIIFFHGGSFAHSSANSAIYDTLCRRLVSICKAVVVSVNYRRAPENRYPCAYDDGWTALNWVKSKSWLRSKDSKTYIYLAGDSSGGNIVHHVASRAVKSGIEVFGNILLNPMFGGQERTKSEVRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGNSLKKIKFPKSLVVVAGFDLVKDWQLAYAKGLEKDGQKVKLLYLDQATVGFYLLPNTEHFYTVMDEISEFVSSDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6512388 6514044 + CmoCh11G011450.1 Cmo11g01145 391764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01145 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787
Cmo11g01145 346 SUPERFAMILY alpha/beta-Hydrolases 34 342 IPR029058 -
Cmo11g01145 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787
Cmo11g01145 346 Gene3D alpha/beta hydrolase 1 344 IPR029058 -
Cmo11g01145 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Cmo11g01145 346 PANTHER GIBBERELLIN RECEPTOR GID1C 3 342 - -
Cmo11g01145 346 PANTHER ARYLACETAMIDE DEACETYLASE 3 342 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g01194 Cmo11g01145 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01145 Cmo-Chr11:6512388 Cmo17g01116 Cmo-Chr17:9141584 0 dispersed
Cmo11g01641 Cmo-Chr11:11670394 Cmo11g01145 Cmo-Chr11:6512388 9.25E-35 dispersed
Cmo14g00715 Cmo-Chr14:3666174 Cmo11g01145 Cmo-Chr11:6512388 4.15E-35 dispersed
Cmo17g01306 Cmo-Chr17:10238277 Cmo11g01145 Cmo-Chr11:6512388 1.16E-66 dispersed
Cmo10g01194 Cmo-Chr10:10949613 Cmo11g01145 Cmo-Chr11:6512388 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01145 K14493 - csv:101213253 638.262