Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01154 ATGGATGAAATTGAAAGTTTAAAGATGCAGGTGGATTTGCTGAGCCGCTTGCACTCTCCTTGTTTGGTGGAGTTGCTTGGCTACTGCGCTGACCAACACCATAGGCTACTGATATTTGAATTTATGCACAATGGTACTCTTCATCATCATCTACATAATCCCAACACTGAATCTAAGCCATTGGATTGGAATACTAGATTAAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTTCTCCATGAGCATGCAGTTCCGTCTGTTATCCATAGAAACTTCAAGTGCACCAATGTTCTGCTAGATCAGGATTTTCGAGCCAAGGTGTTCGATTTCAGTTCGGCCAAGATGGGCTCTGATAAGATCAATGGTCAAATATCTACACAAGTACTCGGAACAACAGGATATCTTGCACCAGAGTATGCTTCAACAGGTAAACTCACAACAAAGTCAGATGTGTATAGCTATGGTGTCGTGCTGCTAGAGCTTTTGACGGGTCGAGTGCCCGTTGATATCAAGCGGCCACAGGGCGAGCACGTTCTTGTCTCATGGGCTCTCCCAAGGCTAACCAATAGAGAAAAAGTAGAGAAAATGATCGACCCAGCCATTCAAGGAAAATACTCAAAGAAGGATCTAATTCAGGTTGCAGCCATTGCAGCAATGTGCGTGCAGCCCGAAGCCGACTACCGACCTCTGATGACCGACGTCGTGCAGTCACTGGTTCCTCTCGTAAAGAACCCATCTTCCTCATCTAGATTCTTCAAATGA 765 45.36 MDEIESLKMQVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNTESKPLDWNTRLRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVFDFSSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPSSSSRFFK 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6629912 6630922 - CmoCh11G011540.1 Cmo11g01154 391773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01154 254 Gene3D Phosphorylase Kinase; domain 1 1 42 - -
Cmo11g01154 254 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g01154 254 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 7 250 - -
Cmo11g01154 254 PANTHER OS01G0750732 PROTEIN 7 250 - -
Cmo11g01154 254 Gene3D Transferase(Phosphotransferase) domain 1 43 251 - -
Cmo11g01154 254 Pfam Protein tyrosine and serine/threonine kinase 3 239 IPR001245 GO:0004672|GO:0006468
Cmo11g01154 254 SUPERFAMILY Protein kinase-like (PK-like) 3 239 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01154 Cmo-Chr11:6629912 Cmo11g01976 Cmo-Chr11:13587372 2.48E-121 dispersed
Cmo10g01152 Cmo-Chr10:9795572 Cmo11g01154 Cmo-Chr11:6629912 4.20E-172 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74679 PF07714 PK_Tyr_Ser-Thr 8.10E-35 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01154 - - csv:101210578 484.952