Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01174 ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTGATTGCTAATTCACTGTTGAATGCAGCAGAGAGCTTCAATGTAGAAGAGCTTGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATAGACCTTTAATTCTGGAGAGATTCAGAGCTCTACTTGGACTCAATCAAAGCCCATCAGATCTGTCGCCTTCGCCGTCTCCATCACCAGCCGAGGCAGCTCGTCCAGTGCACACCCATAAACATTCCCGCCCTCATCAGCTTCGCTTGCACAAGAGCCGACCAGTCTACAAATCTAAAAGACATGAAGATGCAAGAAAAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTACAGGAATCACCATTTTGATATGCATTATTGCTGCCTTCTGGGTCTGCAAGAAGTTTAAAATTCGAACAGAGGAACCCGCGGAGAAGCTTTCTATAACGAGTGAAACAGGAGAGAAGACAGCCAAACAAAAATCTGGGTTTGATCTGTTCGATCTCAGTACGCATGGAATGGATGTTGAAGAACACAGTGTTTCCTCATCTGGGGAGAGAGTTACTCCTGTTAAATCTTGTTCTTCTGATGAGGAGGAATCATTCCATTCTTGTGGGGATACCAATTTGTCGAATGTTCGTCTTTCAAATGCTTCTGAATCTTCTTCAGCTAATGTGAAAACAAATTCTTATTCTTCAGAACCTAACAAACCATTAACTTCTGACCAGTTTCATCTGACCCCTTCTCTTTGTAACTCAGAAACCAAGGATGTCCCATCTTTAGCTCCGCCTCCACCACCACCGCCGCCGCCGCCGCTGCGGCCATCTCCGGTTACTTATCGCAGTTCATTTTCCCTCTCTTCACCCTTTTCAACTGGATCCACCTCCTCTTCTGCATTGCTAAGATCATCATCTCCTGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATCTGCCATCACCTCCAAACATTGCTAAACCTTCACTACCATCATCTACTATTCCTCCACCCCCTTGTCCACCGCCAAGTTTGAAAGAAAACGCTTGTTCTTTCAAAGCCCCACCTCCTCCTCCTCCTTCCAAACTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATCTGCTGCCGAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCGATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTCGGCTACAACCAACATGGTTCAATGAAGAATGGTGATGCTAGCAACAAAACCCCTTCTCCAAGCAAGCATATCCTAGAGGCTAAGAGACTTCAGAACCTAACCATACTCTTAAAAGCCCTGAATCTCTCAGCAGAACAAGCTTGTGAAGCCATAGAACAAGGGACTGGGTTGCGTTTAAGACAACTTGAAGCACTGGTAAAGATGGTACCAACACAGGAAGAACAGGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATACGGGTGCACAGAGAAGTTTGTGATAGCAATACTGAGAATACCATTCGCCTTCCAACGAGTGGAAGCCATGCTCTACAGAGAAACTTTTGAAGATGAAGTGAATCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCTTGCAAGGAGCTAAGATCCAGCAGGCTTTTCCTGAAACTACTTGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTGGGAACAAGCAGAGGAGGCGCAAAAGCATTCAAACTAGACGCACTCCTAAGACTCTCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTCCTCCATTTCGTGGTCCAAGAAATAATCCGATCAGAAGGAATCCGAGTCTCCGGTAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCGAGAACAATCGAAGAAAGAGAAAACGATTACCGAAGAATGGGATTAGATCTGGTCTCCGGCCTGAGCACCGAATTACACAACGTTAAGCGAGCAGCGACAACCGATCTGAAAGTTCTGGCGAGCGCCACAGCGAATCTGAACGAGGGAATGGCGAGATTGCAAGAACTAGTGTTGAAGGAACTGTGTGGAGATGAAAGGAGTGGGAACTTCGTGAGCGCAATGAAAGGGTTCTTGAGCTACGTGAAGAAGACGATGGAGTTGGTGAGGAAGGACGAGGAAGGGGTGATGGGGAGCGTGAGAGAGATCACAGAGTACTTCCATGGAAACGTGAGCAAAGAAGAGACGAATCCGCTGAGGATTTTTGTGATTGTGAGAGATTTTTTGGGAATGTTGGACAATGTGTGTAAAAGCTTCAAGATCGGGAGTTGA 2352 45.66 MGCVVKCVFMIVIANSLLNAAESFNVEELERVSGEDESGGNRPLILERFRALLGLNQSPSDLSPSPSPSPAEAARPVHTHKHSRPHQLRLHKSRPVYKSKRHEDARKRVRKILVAVLVSTGITILICIIAAFWVCKKFKIRTEEPAEKLSITSETGEKTAKQKSGFDLFDLSTHGMDVEEHSVSSSGERVTPVKSCSSDEEESFHSCGDTNLSNVRLSNASESSSANVKTNSYSSEPNKPLTSDQFHLTPSLCNSETKDVPSLAPPPPPPPPPPLRPSPVTYRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPPNIAKPSLPSSTIPPPPCPPPSLKENACSFKAPPPPPPSKLPQFMAFGKEGNLLPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQHGSMKNGDASNKTPSPSKHILEAKRLQNLTILLKALNLSAEQACEAIEQGTGLRLRQLEALVKMVPTQEEQAKLLSYEGDIGEYGCTEKFVIAILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGAKAFKLDALLRLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATTDLKVLASATANLNEGMARLQELVLKELCGDERSGNFVSAMKGFLSYVKKTMELVRKDEEGVMGSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6781255 6784623 - CmoCh11G011740.1 Cmo11g01174 391793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01174 783 PANTHER FORMIN-LIKE PROTEIN 60 780 - -
Cmo11g01174 783 Pfam Formin Homology 2 Domain 382 772 IPR015425 -
Cmo11g01174 783 MobiDBLite consensus disorder prediction 178 367 - -
Cmo11g01174 783 MobiDBLite consensus disorder prediction 326 350 - -
Cmo11g01174 783 MobiDBLite consensus disorder prediction 58 102 - -
Cmo11g01174 783 MobiDBLite consensus disorder prediction 261 279 - -
Cmo11g01174 783 MobiDBLite consensus disorder prediction 280 324 - -
Cmo11g01174 783 Gene3D Formin, FH2 domain 396 781 IPR042201 -
Cmo11g01174 783 MobiDBLite consensus disorder prediction 207 258 - -
Cmo11g01174 783 SUPERFAMILY Formin homology 2 domain (FH2 domain) 387 777 - -
Cmo11g01174 783 ProSiteProfiles Formin homology-2 (FH2) domain profile. 374 783 IPR015425 -
Cmo11g01174 783 PANTHER FORMIN-RELATED 60 780 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cmo11g01174 783 SMART it6_source 374 781 IPR015425 -
Cmo11g01174 783 Coils Coil 535 555 - -
Cmo11g01174 783 MobiDBLite consensus disorder prediction 79 96 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g01196 Cmo11g01174 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01705 Cmo-Chr2:9770535 Cmo11g01174 Cmo-Chr11:6781255 5.09E-120 dispersed
Cmo09g00918 Cmo-Chr9:4786856 Cmo11g01174 Cmo-Chr11:6781255 5.93E-109 dispersed
Cmo11g01174 Cmo-Chr11:6781255 Cmo19g00201 Cmo-Chr19:1313077 2.02E-106 dispersed
Cmo10g01196 Cmo-Chr10:11686100 Cmo11g01174 Cmo-Chr11:6781255 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01174 - - cmos:111441137 1432.93