Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01191 ATGGGGGCTAAATTTTCAAAGCCGAGTCAGGCGAAGGACTCGGCGAAGGTGGAAAACCTTAGTCTGCAACACCATCTCATCAATTATCTATCAAAAAGCTTTTACATCCGTAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTCGCCGGCTATGATCTTGACATGTCATACATCACAGATCACGTTCTGGCAATGTCATTCCCTGCCGAACGTATGCGTGCAATGTATCGTAACCCCCTATGGCAGGTAAAGTCCGTATTGGACATGAGGCATCAAGGACACTACAAGATCTATAATCTTTGCATTGAAGAATCATATGATCCATCACATTTTCATGGGCGTGTGGAGTCATTTCCTTTCGATGATAATCATGTTCCACCTCTACAGATGATCAAACTTTTCTGTGAAAATGTCTCTTCATGGCTATCATCCCACCCAAAGAATATTGCAGTTATACATTGCATGGCTGGAAAAGGTCGAACTGGATTGATGGTATGTGCCTACTTGGTTTACTGTGGCATGTCACCAGAGGATGCACTTCAGCTGTATGCTCAGAGGCGGACAACCAATAATGAAGGAGTATCAATTCCAAGCCAACGACGGTACGTGGGCTACTGGGCAAAGTGTCTTTCCTTTCCCAAGGGAGTTTATAATGGACCACCTGAGGTGAAGTTGCCCGAACCGTGTAGGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTTGTCTCAGAATTGCAGGAGATTCCTTCTCAGCTGTACCGTCCATCTATGGAACTTACCAGGAATCGTTGCAGACAATTCAAGAAAGGTTATGAGAGAAATGACAGTCCTCGTTACTTTTTATCTTTTGTTGAAGCCAAAAACAAAGGGAATGAACCAGAACTCGAACCGCACCTTGTTGTTCAAATGGACACCGAGTGTTCTGCACTGTACCACAAAACCTGCCTTGACTACAATTTTGAGAAGCCACTACCACTAACTGGAGATGTGCGCATCATATTCTACGCAAAGATGTTCGGAGGGCGTCTCTTCTATGCTTGCTTCAACACAGCTTTCATTAAAAACAGCTTGCTACAGCTGAGGTTGCCGGATTTGGACAAAGTTGGGAAAAAGGGAAGGTCAATTTGTGGTCCTTCCTTCTGCTTGGAGTTGGTATTTGGTCCTGCGAATGCAAAACACTCATTTTTTACTCCATCAGATGACGAAAATGCTAGTGATGATATGTCTTAA 1260 43.73 MGAKFSKPSQAKDSAKVENLSLQHHLINYLSKSFYIRNLVSKQRRRMLVAGYDLDMSYITDHVLAMSFPAERMRAMYRNPLWQVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPPLQMIKLFCENVSSWLSSHPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSPEDALQLYAQRRTTNNEGVSIPSQRRYVGYWAKCLSFPKGVYNGPPEVKLPEPCRRELQRIRLYDTVNTESIFFVVSELQEIPSQLYRPSMELTRNRCRQFKKGYERNDSPRYFLSFVEAKNKGNEPELEPHLVVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNTAFIKNSLLQLRLPDLDKVGKKGRSICGPSFCLELVFGPANAKHSFFTPSDDENASDDMS 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6958706 6963808 + CmoCh11G011910.1 Cmo11g01191 391810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01191 419 PANTHER BNAC03G16750D PROTEIN 1 410 - -
Cmo11g01191 419 ProSiteProfiles C2 tensin-type domain profile. 245 399 IPR014020 -
Cmo11g01191 419 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 209 IPR029021 -
Cmo11g01191 419 SMART PTEN_C2_2 227 398 IPR014020 -
Cmo11g01191 419 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Cmo11g01191 419 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 133 188 IPR000387 GO:0016311|GO:0016791
Cmo11g01191 419 ProSiteProfiles Phosphatase tensin-type domain profile. 45 214 IPR029023 -
Cmo11g01191 419 CDD PTP_PTEN 55 209 IPR045101 GO:0016791
Cmo11g01191 419 Gene3D Protein tyrosine phosphatase superfamily 32 213 IPR029021 -
Cmo11g01191 419 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 410 - -
Cmo11g01191 419 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 301 398 IPR035892 -
Cmo11g01191 419 Pfam Tyrosine phosphatase family 148 190 IPR026893 GO:0004721
Cmo11g01191 419 Pfam C2 domain of PTEN tumour-suppressor protein 322 396 IPR014020 -
Cmo11g01191 419 Gene3D - 277 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00697 Cmo-Chr7:3149293 Cmo11g01191 Cmo-Chr11:6958706 6.09E-37 dispersed
Cmo11g01191 Cmo-Chr11:6958706 Cmo14g00573 Cmo-Chr14:2920969 0 dispersed
Cmo11g01191 Cmo-Chr11:6958706 Cmo11g01384 Cmo-Chr11:9670549 4.43E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01191 K01110 - csv:101212127 778.859