Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g01191 | ATGGGGGCTAAATTTTCAAAGCCGAGTCAGGCGAAGGACTCGGCGAAGGTGGAAAACCTTAGTCTGCAACACCATCTCATCAATTATCTATCAAAAAGCTTTTACATCCGTAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTCGCCGGCTATGATCTTGACATGTCATACATCACAGATCACGTTCTGGCAATGTCATTCCCTGCCGAACGTATGCGTGCAATGTATCGTAACCCCCTATGGCAGGTAAAGTCCGTATTGGACATGAGGCATCAAGGACACTACAAGATCTATAATCTTTGCATTGAAGAATCATATGATCCATCACATTTTCATGGGCGTGTGGAGTCATTTCCTTTCGATGATAATCATGTTCCACCTCTACAGATGATCAAACTTTTCTGTGAAAATGTCTCTTCATGGCTATCATCCCACCCAAAGAATATTGCAGTTATACATTGCATGGCTGGAAAAGGTCGAACTGGATTGATGGTATGTGCCTACTTGGTTTACTGTGGCATGTCACCAGAGGATGCACTTCAGCTGTATGCTCAGAGGCGGACAACCAATAATGAAGGAGTATCAATTCCAAGCCAACGACGGTACGTGGGCTACTGGGCAAAGTGTCTTTCCTTTCCCAAGGGAGTTTATAATGGACCACCTGAGGTGAAGTTGCCCGAACCGTGTAGGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTTGTCTCAGAATTGCAGGAGATTCCTTCTCAGCTGTACCGTCCATCTATGGAACTTACCAGGAATCGTTGCAGACAATTCAAGAAAGGTTATGAGAGAAATGACAGTCCTCGTTACTTTTTATCTTTTGTTGAAGCCAAAAACAAAGGGAATGAACCAGAACTCGAACCGCACCTTGTTGTTCAAATGGACACCGAGTGTTCTGCACTGTACCACAAAACCTGCCTTGACTACAATTTTGAGAAGCCACTACCACTAACTGGAGATGTGCGCATCATATTCTACGCAAAGATGTTCGGAGGGCGTCTCTTCTATGCTTGCTTCAACACAGCTTTCATTAAAAACAGCTTGCTACAGCTGAGGTTGCCGGATTTGGACAAAGTTGGGAAAAAGGGAAGGTCAATTTGTGGTCCTTCCTTCTGCTTGGAGTTGGTATTTGGTCCTGCGAATGCAAAACACTCATTTTTTACTCCATCAGATGACGAAAATGCTAGTGATGATATGTCTTAA | 1260 | 43.73 | MGAKFSKPSQAKDSAKVENLSLQHHLINYLSKSFYIRNLVSKQRRRMLVAGYDLDMSYITDHVLAMSFPAERMRAMYRNPLWQVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPPLQMIKLFCENVSSWLSSHPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSPEDALQLYAQRRTTNNEGVSIPSQRRYVGYWAKCLSFPKGVYNGPPEVKLPEPCRRELQRIRLYDTVNTESIFFVVSELQEIPSQLYRPSMELTRNRCRQFKKGYERNDSPRYFLSFVEAKNKGNEPELEPHLVVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNTAFIKNSLLQLRLPDLDKVGKKGRSICGPSFCLELVFGPANAKHSFFTPSDDENASDDMS | 419 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6958706 | 6963808 | + | CmoCh11G011910.1 | Cmo11g01191 | 391810 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g01191 | 419 | PANTHER | BNAC03G16750D PROTEIN | 1 | 410 | - | - | |
Cmo11g01191 | 419 | ProSiteProfiles | C2 tensin-type domain profile. | 245 | 399 | IPR014020 | - | |
Cmo11g01191 | 419 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 53 | 209 | IPR029021 | - | |
Cmo11g01191 | 419 | SMART | PTEN_C2_2 | 227 | 398 | IPR014020 | - | |
Cmo11g01191 | 419 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 153 | 163 | IPR016130 | GO:0016311|GO:0016791 | |
Cmo11g01191 | 419 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 133 | 188 | IPR000387 | GO:0016311|GO:0016791 | |
Cmo11g01191 | 419 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 45 | 214 | IPR029023 | - | |
Cmo11g01191 | 419 | CDD | PTP_PTEN | 55 | 209 | IPR045101 | GO:0016791 | |
Cmo11g01191 | 419 | Gene3D | Protein tyrosine phosphatase superfamily | 32 | 213 | IPR029021 | - | |
Cmo11g01191 | 419 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 1 | 410 | - | - | |
Cmo11g01191 | 419 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 301 | 398 | IPR035892 | - | |
Cmo11g01191 | 419 | Pfam | Tyrosine phosphatase family | 148 | 190 | IPR026893 | GO:0004721 | |
Cmo11g01191 | 419 | Pfam | C2 domain of PTEN tumour-suppressor protein | 322 | 396 | IPR014020 | - | |
Cmo11g01191 | 419 | Gene3D | - | 277 | 401 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo07g00697 | Cmo-Chr7:3149293 | Cmo11g01191 | Cmo-Chr11:6958706 | 6.09E-37 | dispersed | |
Cmo11g01191 | Cmo-Chr11:6958706 | Cmo14g00573 | Cmo-Chr14:2920969 | 0 | dispersed | |
Cmo11g01191 | Cmo-Chr11:6958706 | Cmo11g01384 | Cmo-Chr11:9670549 | 4.43E-46 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g01191 | K01110 | - | csv:101212127 | 778.859 |