Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01201 ATGGAGGTTCTAAGAAGGGGCAGCGGCGGTGGGCTGTTGGCGGCGGTGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGACAACATGGGGTGGACGTCCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTACGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACAAGACCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTCGAGCACCTACCGCCCCCGCCCTCGAGCTCACCCTTGAATGAGAAGAGCAGTGCTCCAAGATCAACCCACATGGGCCACATCCCGTTCGTTTTAACCGCTGTTTTTGCAGCTGCTCGGGCCTTGATATGGTAA 519 51.25 MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHLPPPPSSSPLNEKSSAPRSTHMGHIPFVLTAVFAAARALIW 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7078071 7079794 + CmoCh11G012010.1 Cmo11g01201 391820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01201 172 PANTHER LAMIN-LIKE PROTEIN 13 167 - -
Cmo11g01201 172 PANTHER BLUE COPPER PROTEIN 13 167 IPR039391 GO:0009055
Cmo11g01201 172 Gene3D - 29 132 IPR008972 -
Cmo11g01201 172 SUPERFAMILY Cupredoxins 30 129 IPR008972 -
Cmo11g01201 172 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Cmo11g01201 172 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01201 Cmo-Chr11:7078071 Cmo14g00570 Cmo-Chr14:2904600 1.84E-94 dispersed
Cmo11g01201 Cmo-Chr11:7078071 Cmo11g01202 Cmo-Chr11:7081768 2.20E-34 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01201 - - csv:101210415 254.988