Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01203 ATGGCCGTCTTTCACCCTACCGCTCTTCTTCTTCTTCTACTTTTCCTATCTCTTCCATTCTCCCTTCACTCTCACCTTTCTCTCGATTATTACCACAAAACTTGCCCCGACTTCGCACAAATCGTTCACGACACTGTCGCTCGCAAGCACGCTACTAGCCCCGTCACCGCCGCTGCATCTATGCGCCTCTTCTTCAGCGACTGTTTGGTTGGAGGCTGCGATGCCTCTGTTCTTATTTCATCCAATGTCTTCAACCACGCCGAGCGCGATGCTGAAATCAACCAGGCTCTTCCTGGTGACGCCTTCGACGTTGTCACTCGTGCGAAGATCACCTTAGAGCTCTCTTGCCCTGGCATCGTCTCTTGCTCTGATGTGTTAGCGCAGGCGACTAGAGATCTCATCGCGGCCTCAGGTGGACCGTCGTACAAAGTTGAATTAGGGCGAAAAGATAGCCTCGTCTCGAAGATTTCAGATGTGGAAGGTAACATTCCGAAACCGAATCAATCAATTGACGAATTGATTAAGCTATTCGAAGCGAAAGGATTCACGATTCAAGAAATGGTAGCGCTATACGGCGGACGCACAATCGGATTCTCGAATTGCAGGGAATTCAGCGATCGGCTGTTCAATTTCAGCAAAAACACGCCAACAGATCCTGAGATTAATTCGAAATATGCAGAGGCGTTGAAGAAGTCCTGCGCCGACTACGAGAAGAATCCAGCAAGTTCAGCGTACAGCGACCCCGTAACGCCAGGGAAGTTCGATAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTCGGCGGCGGATCACGCGCTGGTGAAGGATCCAAGGACGAGGAAATTCGTGGAGATGTATGCAGGGAACCAGGCATTATTCTTCAAGGATTTTGGAGAGGCGATGGAGAAGATGAGCGTTCGCGAGGTGAAAACTGGCGAGAAGGGAGATGTGAGGAGAAGGTGCGATGCATTCAATACAATCAACCATTAG 996 50.0 MAVFHPTALLLLLLFLSLPFSLHSHLSLDYYHKTCPDFAQIVHDTVARKHATSPVTAAASMRLFFSDCLVGGCDASVLISSNVFNHAERDAEINQALPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAASGGPSYKVELGRKDSLVSKISDVEGNIPKPNQSIDELIKLFEAKGFTIQEMVALYGGRTIGFSNCREFSDRLFNFSKNTPTDPEINSKYAEALKKSCADYEKNPASSAYSDPVTPGKFDNVYYQNLLRGMGLSAADHALVKDPRTRKFVEMYAGNQALFFKDFGEAMEKMSVREVKTGEKGDVRRRCDAFNTINH 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7087447 7088442 + CmoCh11G012030.1 Cmo11g01203 391822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01203 331 Gene3D Peroxidase, domain 2 164 306 - -
Cmo11g01203 331 PANTHER - 8 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 Gene3D - 29 327 - -
Cmo11g01203 331 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
Cmo11g01203 331 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 Pfam Peroxidase 49 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g01203 331 PANTHER PEROXIDASE 41 8 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02855 Cmo-Chr4:20358428 Cmo11g01203 Cmo-Chr11:7087447 2.19E-127 dispersed
Cmo11g00197 Cmo-Chr11:964110 Cmo11g01203 Cmo-Chr11:7087447 8.23E-168 dispersed
Cmo11g01203 Cmo-Chr11:7087447 Cmo18g00116 Cmo-Chr18:820299 7.41E-153 dispersed
Cmo11g01203 Cmo-Chr11:7087447 Cmo11g00119 Cmo-Chr11:619758 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01203 K00430 - csv:101213178 514.998