Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01255 ATGGCTAAGCTTTTGCTTCTTGGGTTTCTCTTATCAATGGCTTTTACCAAATGGGTTCATGCCTTTTACCCATTTAATCTCTCTGATTCATCGCTCTTTGATTCTTATGAAGCTTCCTTTGCTGTCACCGCTACTCCTCTCATGGTGCCTCTCACTCTCATTCATGGAGCTGATGCAAAACGAGCAGTCTGTTTGGATGGCACATTGCCTGGATATCACTTGCACCGTGGATATGGGTCGGGAGCTAATAGCTGGCTTGTGCAATTGGAGGGGGGTGGATGGTGTAATAATAGAAGGAATTGTGTCTACCGGAAGAATACGAGGCGTGGATCGTCGAGATTTATGGAGAAGCAAATACCATTTACAGGAATTCTGAGCAACAAAGCTGAAGAAAATCCTGATTTTTTTAACTGGAACAGAGTAAAGGTTCGTTACTGTGATGGCGCCTCGTTCACTGGGGATTCTGAGAACAAGGCTGAACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCAATGGAAGAATTGAGGGCCAAGGGAATGCGATTTGCGAAACAGGCCTTGCTTTCTGGCTGCTCGGCGGGAGGTTTGGCATCGATTCTACACTGTGATGAGTTTCGAGGCTTGTTTCCTAGTAATACTAAAGTGAAGTGTCTGAGTGATGCTGGACTATTCCTTGACGTGGCTGATATATCTGGTGGGCATTCTATTAGGAACTTATTTGGTGGTGTGGTGAGCTATCAGGGAGCTAAAAGGAATCTGCCATCCTTTTGTACAAACCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAACATAATCGCTGGAATCAAAACGCCACTGTTTCTTGTCAACGCAGCATACGATTCCTGGCAGATACAATCTAGTCTTGCCCCACCTTCCCTCGACCCGGCCGGGTATTGGCACGATTGTAGGCTGAATCATGCAAAATGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGTTGTAAGGGATTTCTCAAAATCTTACAAAAATGGATTGTTCATTAATTCATGTTTTGCTCACTGCCAAACCGAGCGACAGGATACGTGGTTCAGCGACAATTCCCCTGTCATCGGAAACAAGCCAATTGCTCTGGCTGTTGGAGACTGGTACTTCGACCGAGCAACTGTGAAAGCGGTCGATTGCGCGTATCCTTGTGACAGGAGTTGCCACCATCTGGTTTTTAGAAGCGGGTAG 1245 45.62 MAKLLLLGFLLSMAFTKWVHAFYPFNLSDSSLFDSYEASFAVTATPLMVPLTLIHGADAKRAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNRRNCVYRKNTRRGSSRFMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFTGDSENKAEQLQFRGQRIWLAAMEELRAKGMRFAKQALLSGCSAGGLASILHCDEFRGLFPSNTKVKCLSDAGLFLDVADISGGHSIRNLFGGVVSYQGAKRNLPSFCTNHLDPTSCFFPQNIIAGIKTPLFLVNAAYDSWQIQSSLAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNVVRDFSKSYKNGLFINSCFAHCQTERQDTWFSDNSPVIGNKPIALAVGDWYFDRATVKAVDCAYPCDRSCHHLVFRSG 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7951868 7956121 - CmoCh11G012550.1 Cmo11g01255 391874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01255 414 PANTHER PECTIN ACETYLESTERASE 2 45 412 - -
Cmo11g01255 414 Pfam Pectinacetylesterase 44 392 IPR004963 GO:0016787
Cmo11g01255 414 PANTHER NOTUM-RELATED 45 412 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01038 Cmo-Chr7:5244827 Cmo11g01255 Cmo-Chr11:7951868 2.26E-133 dispersed
Cmo10g01271 Cmo-Chr10:13091989 Cmo11g01255 Cmo-Chr11:7951868 0 dispersed
Cmo11g01255 Cmo-Chr11:7951868 Cmo16g00130 Cmo-Chr16:605501 4.15E-144 dispersed
Cmo11g01255 Cmo-Chr11:7951868 Cmo04g00635 Cmo-Chr4:3142756 3.33E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01255 K19882 - csv:101218273 785.023