Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g01257 ATGCATGCTTTTTTTGTGGTAGGATCTATGAATTTAGGTGGATTTGATTTTGTTTATGCTGTGGCATCAGAAGACATGGATTCACTAACATTTGGATCTCCTAGATTTCTTCGTCATTTAATGGATCCCAGCTCAAGGAAGATCCCAGTTATGGAATTTGAAGTTGCAAAGTTAAAGTATCTTTCAAATAGCTTTGATAAGAGCGTAGTGACCGGAAAGCTGTACCAAATTCCAGAGGGTTGGCCATTTCAAGAGGCCCGACAGCTTTTTAAAGAACCACTAGTGTGTACTGACGAAGAGCAACTTGACATTAAGTGGACTACTCCAGATGAAGAAGGCTTAATCTCATTTTTGGTGAATGAGAATGGGTTCAATAGCGATAGAGTAACAAAGGCAGTAGAAAAAATTAAAGCAGCCAAGAACAAGTCATCACAGGGCCGGATGGAGTCATTTTTCAAGCCCGTAACGAATCCTTCAGTATCCACTAAAAGAAAGGTAACCAAATGTGTACTTAAGTCTCCTAAACCAGGAATCCAGCATAAATACTCTCCACAAGCTTTTTATCCGTCAAGGACAAAGGTCATTGGCAGCCTAGGGACGCCAATATTAGACCATTCTTCCAAGTACTCAGGGTCAAGGCCATTAGTCATGGCTGCTTGCTTCGGCACATGA 672 41.22 MHAFFVVGSMNLGGFDFVYAVASEDMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKLKYLSNSFDKSVVTGKLYQIPEGWPFQEARQLFKEPLVCTDEEQLDIKWTTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKVTKCVLKSPKPGIQHKYSPQAFYPSRTKVIGSLGTPILDHSSKYSGSRPLVMAACFGT 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8014552 8020104 + CmoCh11G012570.1 Cmo11g01257 391876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g01257 223 Gene3D - 12 67 - -
Cmo11g01257 223 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 74 181 IPR006084 -
Cmo11g01257 223 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 16 58 IPR006084 -
Cmo11g01257 223 SUPERFAMILY PIN domain-like 16 56 IPR029060 -
Cmo11g01257 223 PANTHER FLAP ENDONUCLEASE 1 74 181 - -
Cmo11g01257 223 PANTHER FLAP ENDONUCLEASE 1 16 58 - -
Cmo11g01257 223 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 73 153 IPR036279 -
Cmo11g01257 223 Pfam XPG I-region 17 55 IPR006086 GO:0004518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g01257 K04799 - zju:107411672 258.455